PDB 3p1z

PDB Information

PDB3P1Z
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli
Gene SourceAeropyrum pernix
Primary Citation
Cleavage of intron from the standard or non-standard position of the precursor tRNA by the splicing endonuclease of Aeropyrum pernix, a hyper-thermophilic Crenarchaeon, involves a novel RNA recognition site in the Crenarchaea specific loop
Hirata, A., Kitajima, T., Hori, H.
Nucleic Acids Res.
HeaderHydrolase
Released2010-10-01
Resolution2.800
CATH Insert Date14 Aug, 2011

PDB Images (37)

PDB Prints

PDB Chains (12)

Chain ID Date inserted into CATH CATH Status
A 15 Aug, 2011 Chopped
B 15 Aug, 2011 Chopped
C 15 Aug, 2011 Chopped
D 15 Aug, 2011 Chopped
E 15 Aug, 2011 Chopped
F 15 Aug, 2011 Chopped
G 15 Aug, 2011 Chopped
H 15 Aug, 2011 Chopped
I 15 Aug, 2011 Chopped
J 15 Aug, 2011 Chopped
K 15 Aug, 2011 Chopped
L 15 Aug, 2011 Chopped

CATH Domains (24)

Domain ID Date inserted into CATH Superfamily CATH Status
3p1zA01 01 Jul, 2013 3.40.1170.20 Assigned
3p1zA02 01 Jul, 2013 3.40.1350.10 Assigned
3p1zB01 17 Aug, 2011 3.40.1170.20 Assigned
3p1zB02 17 Aug, 2011 3.40.1350.10 Assigned
3p1zC01 01 Jul, 2013 3.40.1170.20 Assigned
3p1zC02 01 Jul, 2013 3.40.1350.10 Assigned
3p1zD01 17 Aug, 2011 3.40.1170.20 Assigned
3p1zD02 17 Aug, 2011 3.40.1350.10 Assigned
3p1zE01 01 Jul, 2013 3.40.1170.20 Assigned
3p1zE02 01 Jul, 2013 3.40.1350.10 Assigned
3p1zF01 17 Aug, 2011 3.40.1170.20 Assigned
3p1zF02 17 Aug, 2011 3.40.1350.10 Assigned
3p1zG01 01 Jul, 2013 3.40.1170.20 Assigned
3p1zG02 01 Jul, 2013 3.40.1350.10 Assigned
3p1zH01 17 Aug, 2011 3.40.1170.20 Assigned
3p1zH02 17 Aug, 2011 3.40.1350.10 Assigned
3p1zI01 01 Jul, 2013 3.40.1170.20 Assigned
3p1zI02 01 Jul, 2013 3.40.1350.10 Assigned
3p1zJ01 17 Aug, 2011 3.40.1170.20 Assigned
3p1zJ02 17 Aug, 2011 3.40.1350.10 Assigned
3p1zK01 01 Jul, 2013 3.40.1170.20 Assigned
3p1zK02 01 Jul, 2013 3.40.1350.10 Assigned
3p1zL01 16 Aug, 2011 3.40.1170.20 Assigned
3p1zL02 16 Aug, 2011 3.40.1350.10 Assigned

UniProtKB Entries (12)

Accession Gene ID Taxon Description
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
Q9YE85 Q9YE85_AERPE Aeropyrum pernix K1 Uncharacterized protein
Q9YE85 Q9YE85_AERPE Aeropyrum pernix K1 Uncharacterized protein
Q9YE85 Q9YE85_AERPE Aeropyrum pernix K1 Uncharacterized protein
Q9YE85 Q9YE85_AERPE Aeropyrum pernix K1 Uncharacterized protein
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
Q9YE85 Q9YE85_AERPE Aeropyrum pernix K1 Uncharacterized protein
Q9YE85 Q9YE85_AERPE Aeropyrum pernix K1 Uncharacterized protein
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
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