PDB 3p1y

PDB Information

PDB3P1Y
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli
Gene SourceArchaeoglobus fulgidus
Primary Citation
Cleavage of intron from the standard or non-standard position of the precursor tRNA by the splicing endonuclease of Aeropyrum pernix, a hyper-thermophilic Crenarchaeon, involves a novel RNA recognition site in the Crenarchaea specific loop
Hirata, A., Kitajima, T., Hori, H.
Nucleic Acids Res.
HeaderHydrolase
Released2010-10-01
Resolution2.050
CATH Insert Date14 Aug, 2011

PDB Images (17)

PDB Prints

PDB Chains (4)

Chain ID Date inserted into CATH CATH Status
A 15 Aug, 2011 Chopped
B 15 Aug, 2011 Chopped
C 15 Aug, 2011 Chopped
D 15 Aug, 2011 Chopped

CATH Domains (12)

Domain ID Date inserted into CATH Superfamily CATH Status
3p1yA01 18 Sep, 2013 3.40.1350.150 Assigned
3p1yA02 18 Sep, 2013 3.40.1170.20 Assigned
3p1yA03 18 Sep, 2013 3.40.1350.10 Assigned
3p1yB01 18 Sep, 2013 3.40.1350.150 Assigned
3p1yB02 18 Sep, 2013 3.40.1170.20 Assigned
3p1yB03 18 Sep, 2013 3.40.1350.10 Assigned
3p1yC01 18 Sep, 2013 3.40.1350.150 Assigned
3p1yC02 18 Sep, 2013 3.40.1170.20 Assigned
3p1yC03 18 Sep, 2013 3.40.1350.10 Assigned
3p1yD01 18 Sep, 2013 3.40.1350.150 Assigned
3p1yD02 18 Sep, 2013 3.40.1170.20 Assigned
3p1yD03 18 Sep, 2013 3.40.1350.10 Assigned

UniProtKB Entries (8)

Accession Gene ID Taxon Description
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
O29362 ENDA_ARCFU Archaeoglobus fulgidus DSM 4304 tRNA-splicing endonuclease
O29362 ENDA_ARCFU Archaeoglobus fulgidus DSM 4304 tRNA-splicing endonuclease
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
Q9YBF1 ENDA_AERPE Aeropyrum pernix K1 tRNA-splicing endonuclease
O29362 ENDA_ARCFU Archaeoglobus fulgidus DSM 4304 tRNA-splicing endonuclease
O29362 ENDA_ARCFU Archaeoglobus fulgidus DSM 4304 tRNA-splicing endonuclease