The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
P-loop containing nucleotide triphosphate hydrolases
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 182: ras-related protein Rap-1b

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 21 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO TermAnnotationsEvidence
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
443 A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS)
(433 more)
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
437 A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS)
(427 more)
GDP binding GO:0019003
Interacting selectively and non-covalently with GDP, guanosine 5'-diphosphate.
437 A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS)
(427 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
390 F1NSA8 (/IPI) F1NSA8 (/IPI) F1NSA8 (/IPI) F1NSA8 (/IPI) F1NSA8 (/IPI) F1NSA8 (/IPI) F1NSA8 (/IPI) P08645 (/IPI) P08645 (/IPI) P08645 (/IPI)
(380 more)
Rap guanyl-nucleotide exchange factor activity GO:0017034
Stimulates the exchange of guanyl nucleotides associated with a GTPase of the Rap family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
162 P08645 (/IDA) P08645 (/IDA) P08645 (/IDA) P08645 (/IDA) P08645 (/IDA) P08645 (/IDA) P08645 (/IDA) P18613 (/IDA) P61224 (/IDA) P61224 (/IDA)
(152 more)
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
155 P18613 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA)
(145 more)
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
154 P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO)
(144 more)
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
154 P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA) P61224 (/IDA)
(144 more)
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
154 P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO) P62835 (/ISO)
(144 more)
Showing 1 to 10 of 21 entries

There are 110 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO TermAnnotationsEvidence
Rap protein signal transduction GO:0032486
A series of molecular signals within the cell that are mediated by a member of the Rap family of proteins switching to a GTP-bound active state.
638 A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS)
(628 more)
Establishment of endothelial barrier GO:0061028
The establishment of a barrier between endothelial cell layers, such as those in the brain, lung or intestine, to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.
638 A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS)
(628 more)
Cellular response to cAMP GO:0071320
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.
638 A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS)
(628 more)
Regulation of cell junction assembly GO:1901888
Any process that modulates the frequency, rate or extent of cell junction assembly.
638 A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS)
(628 more)
Regulation of establishment of cell polarity GO:2000114
Any process that modulates the frequency, rate or extent of establishment of cell polarity.
437 A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS)
(427 more)
Positive regulation of neuron projection development GO:0010976
Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Nerve growth factor signaling pathway GO:0038180
A series of molecular signals initiated by the binding of nerve growth factor (NGF) to a receptor on the surface of the target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Positive regulation of GTPase activity GO:0043547
Any process that activates or increases the activity of a GTPase.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Positive regulation of protein kinase activity GO:0045860
Any process that activates or increases the frequency, rate or extent of protein kinase activity.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Positive regulation of ERK1 and ERK2 cascade GO:0070374
Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Showing 1 to 10 of 110 entries

There are 48 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO TermAnnotationsEvidence
Cell-cell junction GO:0005911
A cell junction that forms a connection between two or more cells in a multicellular organism; excludes direct cytoplasmic junctions such as ring canals.
437 A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS) A5A6J7 (/ISS)
(427 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
201 P62834 (/IDA) P62834 (/IDA) P62834 (/IDA) P62834 (/IDA) P62834 (/IDA) P62834 (/IDA) P62834 (/IDA) P62834 (/IDA) P62834 (/IDA) P62834 (/IDA)
(191 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Early endosome GO:0005769
A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Late endosome GO:0005770
A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Cell junction GO:0030054
A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
201 P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS) P62833 (/ISS)
(191 more)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
174 P61223 (/TAS) P61223 (/TAS) P61223 (/TAS) P61223 (/TAS) P61223 (/TAS) P61223 (/TAS) P61223 (/TAS) P61223 (/TAS) P61223 (/TAS) P61223 (/TAS)
(164 more)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
154 P61224 (/TAS) P61224 (/TAS) P61224 (/TAS) P61224 (/TAS) P61224 (/TAS) P61224 (/TAS) P61224 (/TAS) P61224 (/TAS) P61224 (/TAS) P61224 (/TAS)
(144 more)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
154 P61224 (/HDA) P61224 (/HDA) P61224 (/HDA) P61224 (/HDA) P61224 (/HDA) P61224 (/HDA) P61224 (/HDA) P61224 (/HDA) P61224 (/HDA) P61224 (/HDA)
(144 more)
Showing 1 to 10 of 48 entries
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