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CATH Superfamily 3.40.140.10

Cytidine Deaminase, domain 2

The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
Cytidine Deaminase, domain 2
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Browse Functional Families

ID Function Family (FunFam) Name Total Sequences Enzyme? Structure? Structural Representative PDB Sites? Alignment Diversity (0-100)
1
26S proteasome non-ATPase regulatory subunit
1028
3D
 4ocnB00 - 74.7
2
Pre-mRNA-processing-splicing factor 8
527
3D
 4kitC00 - 96.7
3
COP9 signalosome complex subunit 5
449 - - 90.2
4
26S proteasome regulatory subunit rpn-8
404
3D
 5w83A00 - 76.7
5
tRNA-specific adenosine deaminase
390
3D
 1z3aB00 - 93.1
8
Cytidine deaminase
341
3D
 1mq0B00 - 95.0
6
Cytidine deaminase
328
3D
 1ctuA02 - 95.4
7
Cytidine deaminase
326
3D
 1ctuA01 - 78.5
9
26S proteasome non-ATPase regulatory subunit 7
265
3D
 2o96B00 - 81.7
10
AMSH-like protease isoform X1
257
3D
 3rzvA00 - 81.8
11
tRNA-specific adenosine deaminase
212
3D
 1wkqB00 - 93.3
12
nuclear protein localization protein 4 homolog
190 - - 77.9
16
Cytosine deaminase
190
3D
 2o3kB00 - 94.6
13
26S proteasome non-ATPase regulatory subunit 7
189 - - 83.5
14
Eukaryotic translation initiation factor 3 subunit F
185 - - 90.3
15
Lys-63-specific deubiquitinase BRCC36 isoform 3
181
3D
 5cw6A00 - 68.8
17
COP9 signalosome complex subunit 6
168
3D
 4qftA00 - 71.2
18
histone H2A deubiquitinase MYSM1 isoform X2
160 - - 64.1
19
Eukaryotic translation initiation factor 3 subunit F
158 - - 71.7
20
Eukaryotic translation initiation factor 3 subunit H
149 - - 52.5
21
Deoxycytidylate deaminase
137
3D
 2w4lF00 - 94.0
25
Riboflavin biosynthesis protein RibD
131
3D
 2obcB01 - 88.2
23
Eukaryotic translation initiation factor 3 subunit H
129 - - 72.9
22
Single-stranded DNA cytosine deaminase
129 - - 72.7
24
AMSH-like ubiquitin thioesterase 3
127 - - 73.6
26
26S proteasome non-ATPase regulatory subunit 14
115 - - 86.6
27
Sulfur carrier protein FdhD
111 - - 5.7
28
Cytidine and dCMP deaminase domain containing 1
111 - - 66.0
29
DNA dC->dU-editing enzyme APOBEC-3G
106
3D
 3e1uA00 - 91.4
33
AMSH-like protease sst2
100
3D
 4zftC00 - 91.2
30
Cytidine and dCMP deaminase domain-containing protein 1
94 - - 86.4
31
Probable C->U-editing enzyme APOBEC-2
88
3D
 2rpzA00 - 73.8
32
DNA repair protein RadC
77 - - 70.0
34
Eukaryotic translation initiation factor 3 subunit F
73 - - 76.3
35
dCMP deaminase
70 - - 68.8
36
tRNA-specific adenosine deaminase 2
67
3D
 3dh1D00 - 80.9
38
tRNA-specific adenosine deaminase
64
3D
 1wwrD00 - 77.7
37
COP9 signalosome subunit 6
60 - - 71.8
39
tRNA-specific adenosine deaminase
53 - - 83.6
40
26S proteasome regulatory subunit RPN8
49 - - 83.9
41
Cytidine deaminase
48 - - 92.9
43
ComE operon protein 2
46 - - 13.4
44
Apolipoprotein B mRNA editing enzyme catalytic subunit 3B
46 - - 81.5
42
Mov34/MPN/PAD-1 family protein
46 - - 69.9
45
Eukaryotic translation initiation factor 3 subunit H
41 - - 77.1
46
AMSH-like ubiquitin thioesterase 2
40 - - 71.3
47
Apolipoprotein B editing enzyme catalytic polypeptide-like 3H
40 - - 85.4
48
CysO-cysteine peptidase
39 - - 52.6
49
C->U-editing enzyme APOBEC-1 isoform X2
37 - - 82.3
50
tRNA-specific adenosine deaminase
35 - - 81.0
51
Nucleoside deaminase
33 - - 97.9
52
Eukaryotic translation initiation factor 3 subunit H
28 - - 81.0
53
MPN domain-containing protein CG4751
26 - - 87.7
59
Putative cytidine deaminase
25
3D
 3b8fD00 - 11.9
54
Eukaryotic translation initiation factor 3 subunit 5, putative
24 - - 17.8
55
COP9 signalosome complex subunit 6
23 - - 66.9
56
tRNA-specific adenosine deaminase TAD3 isoform A
23 - - 82.7
57
Cytidine deaminase, putative
23 - - 76.8
58
Phage tail protein
22 - - 81.2
60
Cytidine deaminase
21 - - 84.0
61
DRAP deaminase
20 - - 78.8
62
tRNA-specific adenosine deaminase-like protein 3
19 - - 83.1
63
DNA repair protein RadC
19 - - 8.0
64
Nuclear protein localization protein 4, putative
18 - - 9.8
65
tRNA-specific adenosine deaminase 2
18 - - 64.8
66
Chromosome 10, whole genome shotgun sequence
17 - - 40.3
68
tRNA-specific adenosine deaminase
16 - - 4.8
67
COP9 signalosome, subunit CSN5
16 - - 37.4
69
Cytidine deaminase
15 - - 74.1
70
Cell division protein DedD
14 - - 19.0
71
Riboflavin biosynthesis protein PYRR, chloroplastic
14 - - 65.3
85
Mov34/MPN/PAD-1 family protein
13
3D
 2kcqA00 - 92.8
75
COP9 signalosome complex subunit 6
13 - - 72.5
73
COP9 signalosome complex subunit 6a
13 - - 12.1
76
COP9 signalosome complex subunit 5
13 - - 81.4
72
Eukaryotic translation initiation factor 3 subunit H
13 - - 15.5
74
Unplaced genomic scaffold supercont1.13, whole genome shotgun sequence
13 - - 15.5
79
DNA dC->dU-editing enzyme APOBEC-3
12 - - 59.8
80
NPL4-like protein 1
12 - - 28.0
78
Cytidine/deoxycytidylate deaminase family protein
12 - - 4.0
77
Proteasome regulatory non-ATPase subunit 8
12 - - 22.1
83
Cytidine and deoxycytidylate deaminase,putative
11 - - 0.7
84
Eukaryotic translation initiation factor 3 subunit H
11 - - 6.7
81
Eukaryotic translation initiation factor 3 subunit F
11 - - 9.0
82
Eukaryotic translation initiation factor 3 subunit F
11 - - 16.7
86
Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence
10 - - 15.2
87
Eukaryotic translation initiation factor 3 subunit H
10 - - 80.2
88
Cytidine deaminase, putative
10 - - 69.8
92
Cytidine deaminase family enzyme
9 - - 8.8
89
Eukaryotic translation initiation factor 3 subunit F
9 - - 24.7
94
Cytidine deaminase
9 - - 5.1
91
tRNA-specific adenosine deaminase subunit
9 - - 2.7
90
Cytidine deoxycytidylate deaminase family protein
9 - - 71.9
93
POSSIBLE DEAMINASE
9 - - 2.0
95
COP9 signalosome complex subunit 5
9 - - 64.8
100
DNA repair protein RadC
8 - - 22.3
98
Cytidine deaminase
8 - - 23.7
97
Cytidine deaminase-like protein
8 - - 80.3
96
GG22115
8 - - 40.1
99
Cytidine deaminase
8 - - 0.0
105
Hypothetical_protein_-_conserved
7 - - 9.4
110
GD11395
7 - - 66.7
106
Cytidine/deoxycytidylate deaminase family protein
7 - - 13.7
109
Predicted protein
7 - - 38.6
102
Uncharacterized protein
7 - - 41.5
103
WGS project CABT00000000 data, contig 2.3
7 - - 61.1
104
Nuclear protein localization, putative
7 - - 7.9
101
Uncharacterized protein
7 - - 70.9
108
Splicing factor Prp8, putative
7 - - 4.7
107
dCMP deaminase
7 - - 17.3
116
Cytidine deaminase, putative
6 - - 11.1
115
COP9 signalosome subunit, putative
6 - - 5.2
113
Putative deaminase
6 - - 37.0
114
Cytidine deaminase
6 - - 45.1
112
Mov34/MPN/PAD-1 metallopeptidase, putative
6 - - 40.2
119
Non ATPase subunit MPR1 of 26S proteasome
6 - - 55.3
118
tRNA-specific adenosine deaminase subunit TAD3, putative
6 - - 71.6
111
Histone H2A deubiquitinase MYSM1
6 - - 4.1
117
Cytidine deaminase,putative
6 - - 6.7
129
Nucleoside deaminase
5 - - 2.5
122
Putative inactive tRNA-specific adenosine deaminase-like protein 3
5 - - 66.6
123
Cytidine deaminase, putative
5 - - 35.3
131
Sulfurylase
5 - - 0.9
124
COP9 signalosome complex subunit 6
5 - - 7.5
125
Hypothetical_protein
5 - - 4.3
120
Mov34/MPN/PAD-1 family protein, expressed
5 - - 31.1
211
tRNA
cytosine(8
5
3D
 3g8qD01 - 0.0
126
26S proteasome non-ATPase regulatory subunit 7
5 - - 13.5
127
Eukaryotic translation initiation factor 3 subunit F-2
5 - - 8.6
130
Eukaryotic translation initiation factor 3 subunit H
5 - - 4.1
133
Riboflavin biosynthesis protein RibD
5 - - 0.0
121
NPL4 family, putative
5 - - 35.9
134
Riboflavin biosynthesis protein RibD
5 - - 0.0
128
Eukaryotic translation initiation factor 3 subunit F
5 - - 12.1
132
PSMD14 isoform 3
5 - - 15.0
138
Mov34/MPN/PAD-1 metallopeptidase, putative
4 - - 40.1
146
ER membrane protein complex subunit 8/9 homolog
4 - - 77.6
140
Putative 26S proteasome non-ATPase regulatory subunit
4 - - 0.0
145
Probable inactive cytidine deaminase 4
4 - - 63.3
137
Uncharacterized protein
4 - - 38.2
143
Cytidine and dCMP deaminase domain containing 1
4 - - 13.4
144
Cytidine deaminase
4 - - 5.8
142
Sulfur carrier protein FdhD
4 - - 0.0
136
COP9 signalosome complex subunit 6
4 - - 14.6
135
Nuclear protein localization protein 4, variant
4 - - 20.3
203
COP9 signalosome complex subunit 5
4
3D
 4f7oB00 - 21.6
141
Lys-63-specific deubiquitinase BRCC36
4 - - 12.7
139
Cytidine deaminase-like protein
4 - - 69.2
158
26S proteasome non-ATPase regulatory subunit 7
3 - - 30.9
151
Uncharacterized protein
3 - - 2.2
157
Pre-mRNA splicing factor Prp8, putative
3 - - 33.3
149
Translation initiation factor eIF3 subunit, putative
3 - - 4.8
148
Eukaryotic translation initiation factor 3 subunit H
3 - - 2.2
156
Deoxycytidylate deaminase-related protein
3 - - 0.0
150
Uncharacterized protein
3 - - 0.0
155
Predicted protein
3 - - 72.8
147
Uncharacterized protein
3 - - 70.1
153
JAB1/MPN/MOV34 metalloenzyme domain containing protein
3 - - 13.4
154
26S proteasome non-ATPase regulatory subunit 14
3 - - 5.0
152
Apolipoprotein B mRNA-editing enzyme, catalytic polypeptide-like 2
3 - - 10.2
176
COP9 signalosome subunit 6
2 - - 2.3
184
Predicted protein
2 - - 5.8
183
tRNA-sepcific adenosine deaminase
2 - - 0.0
168
Uncharacterized protein
2 - - 28.5
198
Uncharacterized protein
2 - - 0.0
161
Nuclear protein localization protein 4 homolog
2 - - 20.6
191
Cytidine deaminase
2 - - 0.0
170
Uncharacterized protein
2 - - 45.8
189
Uncharacterized protein
2 - - 0.0
175
Eukaryotic translation initiation factor 3 subunit H
2 - - 1.8
182
YALI0D26884p
2 - - 0.0
174
Eukaryotic translation initiation factor 3 subunit H
2 - - 7.7
201
Deoxycytidylate deaminase, putative
AFU_orthologue AFUA_2G06240
2 - - 0.0
186
Uncharacterized protein
2 - - 2.0
167
Uncharacterized protein
2 - - 16.6
173
Uncharacterized protein
2 - - 9.9
197
Uncharacterized protein
2 - - 0.0
172
Uncharacterized protein
2 - - 55.4
179
Uncharacterized protein
2 - - 3.9
185
Eukaryotic translation initiation factor 3 subunit H
2 - - 10.3
180
Eukaryotic translation initiation factor 3 subunit F
2 - - 4.7
196
Predicted protein
2 - - 36.6
166
Uncharacterized protein
2 - - 11.5
187
Cytosine deaminase, putative
2 - - 1.6
178
Uncharacterized protein
2 - - 9.9
202
COP9 signalosome complex subunit 6
2 - - 17.5
171
Uncharacterized protein
2 - - 40.1
190
Eukaryotic translation initiation factor 3 subunit H
2 - - 0.0
160
Pre-mRNA-processing-splicing factor 8A
2 - - 35.0
195
Uncharacterized protein
2 - - 6.1
165
Uncharacterized protein
2 - - 19.5
194
26S proteasome non-ATPase regulatory subunit 14-like protein
2 - - 7.8
164
Uncharacterized protein
2 - - 15.3
188
Cytosine/adenosine deaminase
2 - - 6.7
200
Cytidine deaminase
2 - - 1.9
193
CysO-cysteine peptidase protein
2 - - 9.4
177
Eukaryotic translation initiation factor 3 subunit F
2 - - 0.0
163
Apolipoprotein B mRNA editing enzyme catalytic subunit 3B
2 - - 0.0
181
Eukaryotic translation initiation factor 3 subunit F
2 - - 0.0
159
Histone H2A deubiquitinase MYSM1
2 - - 31.5
162
Apolipoprotein B mRNA editing enzyme catalytic subunit 3B
2 - - 5.9
192
Uncharacterized protein
2 - - 2.8
169
Uncharacterized protein
2 - - 40.9
199
Cytidine deaminase
2 - - 0.0
221
Uncharacterized protein
1 - - 0.0
254
Cytidine deaminase
1 - - 0.0
288
Uncharacterized protein
1 - - 0.0
234
Guanine deaminase
1 - - 0.0
277
Uncharacterized protein
1 - - 0.0
263
CMP/dCMP deaminase zinc-binding
1 - - 0.0
233
Uncharacterized protein
1 - - 0.0
264
Uncharacterized protein
1 - - 0.0
247
Uncharacterized protein
1 - - 0.0
217
Uncharacterized protein
1 - - 0.0
253
Uncharacterized protein
1 - - 0.0
262
Predicted protein
1 - - 0.0
292
tRNA-specific adenosine deaminase subunit tad2
1 - - 0.0
269
Uncharacterized protein
1 - - 0.0
281
Uncharacterized protein
1 - - 0.0
252
Putative deoxycytidylate deaminase-like Protein
1 - - 0.0
239
Uncharacterized protein
1 - - 0.0
228
Uncharacterized protein
1 - - 0.0
207
Uncharacterized protein
1 - - 0.0
259
Uncharacterized protein
1 - - 0.0
232
Uncharacterized protein
1 - - 0.0
287
Uncharacterized protein
1 - - 0.0
236
Lys-63-specific deubiquitinase BRCC36-like Protein
1 - - 0.0
278
Uncharacterized protein
1 - - 0.0
256
Eukaryotic translation initiation factor 3 subunit H
1 - - 0.0
248
Uncharacterized protein
1 - - 0.0
266
Cytidine/deoxycytidylate deaminase family protein
1 - - 0.0
218
Uncharacterized protein
1 - - 0.0
290
STAM-binding protein-like 1
1 - - 0.0
260
Uncharacterized protein
1 - - 0.0
241
Uncharacterized protein
1 - - 0.0
265
Activation-induced cytidine deaminase
1 - - 0.0
208
Myb-like protein H
1 - - 0.0
227
Uncharacterized protein
1 - - 0.0
250
Eukaryotic translation initiation factor 3 subunit H
1 - - 0.0
255
Protein CBG16582
1 - - 0.0
235
tRNA-specific adenosine deaminase, putative
1 - - 0.0
271
Predicted protein
1 - - 0.0
230
CMP/dCMP deaminase, zinc-binding domain-containing protein
1 - - 0.0
214
Uncharacterized protein
1 - - 0.0
244
Uncharacterized protein
1 - - 0.0
267
Cytidine/deoxycytidylate deaminase family protein
1 - - 0.0
273
Uncharacterized protein
1 - - 0.0
274
Uncharacterized protein
1 - - 0.0
209
Predicted protein
1 - - 0.0
237
Mov34/MPN/PAD-1 family protein
1 - - 0.0
243
Uncharacterized protein
1 - - 0.0
286
Cytidine deaminase 3
1 - - 0.0
225
Uncharacterized protein
1 - - 0.0
213
Uncharacterized protein
1 - - 0.0
257
Uncharacterized protein
1 - - 0.0
220
Uncharacterized protein
1 - - 0.0
226
Uncharacterized protein
1 - - 0.0
272
Predicted protein
1 - - 0.0
204
Uncharacterized protein
1 - - 0.0
279
Uncharacterized protein
1 - - 0.0
285
Uncharacterized protein
1 - - 0.0
280
Uncharacterized protein
1 - - 0.0
249
Uncharacterized protein
1 - - 0.0
212
Uncharacterized protein
1 - - 0.0
242
Os10g0506300 protein
1 - - 0.0
219
Predicted protein
1 - - 0.0
246
Protein CBG02246
1 - - 0.0
283
Uncharacterized protein
1 - - 0.0
268
Uncharacterized protein
1 - - 0.0
216
Chromosome 1, whole genome shotgun sequence
1 - - 0.0
238
Uncharacterized protein
1 - - 0.0
229
C6.1A, putative
1 - - 0.0
258
Uncharacterized protein
1 - - 0.0
222
Predicted protein
1 - - 0.0
276
Uncharacterized protein
1 - - 0.0
205
26S proteasome non-ATPase regulatory subunit 14-like protein
1 - - 0.0
284
Predicted protein
1 - - 0.0
206
Uncharacterized protein
1 - - 0.0
231
Predicted protein
1 - - 0.0
270
Uncharacterized protein
1 - - 0.0
289
STAM binding protein like 1
1 - - 0.0
275
Cytidine/deoxycytidylate deaminase family protein
1 - - 0.0
282
Eukaryotic translation initiation factor 3 subunit H
1 - - 0.0
224
Uncharacterized protein
1 - - 0.0
251
Predicted protein
1 - - 0.0
223
Uncharacterized protein
1 - - 0.0
215
Eukaryotic translation initiation factor 3 subunit F
1 - - 0.0
210
Uncharacterized protein
1 - - 0.0
240
Cytidine and deoxycytidylate deaminase zinc-binding region family protein
1 - - 0.0
245
MPN domain-containing protein, putative
1 - - 0.0
261
Uncharacterized protein
1 - - 0.0
291
STAM-binding protein
1 - - 0.0
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