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CATH Superfamily 3.30.70.2070

VP9 protein domain

The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
VP9 protein domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Superfamily: VP9 protein domain

White spot syndrome virus (WSSV) is a major pathogen in shrimp aquaculture PMID:16956937. VP9, a non-structural protein of WSSV containing a ferredoxin fold, is encoded by open reading frame wsv230. Two dimers come together to form one asymmetric unit which possesses a DNA recognition fold and specific metal binding sites possibly for zinc. VP9 is predicted to be involved in the transcriptional regulation of WSSV. VP9 is found N-terminal to the INTERPRO:IPR009766/PFAM:PF07056 domain.

INTERPRO:IPR018587, PFAM:PF09625,DOI:10.1128/JVI.00698-06

GO Diversity

Unique GO annotations
0 Unique GO terms

EC Diversity

Unique EC annotations
0 Unique EC terms

Species Diversity

Unique species annotations
3 Unique species

Sequence/Structure Diversity

Overview of the sequence / structure diversity of this superfamily compared to other superfamilies in CATH. Click on the chart to view the data in more detail.

Superfamily Summary

A general summary of information for this superfamily.
Structures
Domains: 7
Domain clusters (>95% seq id): 2
Domain clusters (>35% seq id): 1
Unique PDBs: 3
Alignments
Structural Clusters (5A): 1
Structural Clusters (9A): 1
FunFam Clusters: 0
Function
Unique EC:
Unique GO:
Taxonomy
Unique Species: 3
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