The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Erythroid Transcription Factor GATA-1, subunit A
".
FunFam 1: GATA transcription factor (GATAd)
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 87 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
32 |
O09100 (/IPI)
O09100 (/IPI)
P15976 (/IPI)
P17678 (/IPI)
P17679 (/IPI)
P23769 (/IPI)
P23769 (/IPI)
P23769 (/IPI)
P23769 (/IPI)
P23769 (/IPI)
(22 more) |
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
19 |
P15976 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23771 (/IDA)
P23772 (/IDA)
P23772 (/IDA)
P46152 (/IDA)
(9 more) |
|
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
17 |
A0A0R4IB15 (/IDA)
O09100 (/IDA)
O09100 (/IDA)
P15976 (/IDA)
P17679 (/IDA)
P43429 (/IDA)
P43694 (/IDA)
P43694 (/IDA)
P46152 (/IDA)
P97489 (/IDA)
(7 more) |
|
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
14 |
P23771 (/IDA)
P23772 (/IDA)
P23772 (/IDA)
P23825 (/IDA)
P43694 (/IDA)
P43694 (/IDA)
P43695 (/IDA)
P43695 (/IDA)
P46152 (/IDA)
P46153 (/IDA)
(4 more) |
|
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
13 |
P17679 (/IDA)
P23772 (/IDA)
P23772 (/IDA)
P43429 (/IDA)
P46153 (/IDA)
P70005 (/IDA)
P91623 (/IDA)
Q05AJ3 (/IDA)
Q08369 (/IDA)
Q61169 (/IDA)
(3 more) |
|
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
12 |
P23769 (/IPI)
P23769 (/IPI)
P23769 (/IPI)
P23769 (/IPI)
P23769 (/IPI)
P23771 (/IPI)
P43694 (/IPI)
P43694 (/IPI)
P46152 (/IPI)
P46153 (/IPI)
(2 more) |
|
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
11 |
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P46152 (/IDA)
P52168 (/IDA)
P52168 (/IDA)
P97489 (/IDA)
Q08369 (/IDA)
(1 more) |
|
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
11 |
P15976 (/ISM)
P23769 (/ISM)
P23769 (/ISM)
P23769 (/ISM)
P23769 (/ISM)
P23769 (/ISM)
P23771 (/ISM)
P43694 (/ISM)
P43694 (/ISM)
Q92908 (/ISM)
(1 more) |
|
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
11 |
P15976 (/NAS)
P23769 (/NAS)
P23769 (/NAS)
P23769 (/NAS)
P23769 (/NAS)
P23769 (/NAS)
P23771 (/NAS)
P43694 (/NAS)
P43694 (/NAS)
Q92908 (/NAS)
(1 more) |
|
Enhancer sequence-specific DNA binding GO:0001158
Interacting selectively and non-covalently with a specific sequence of DNA that is part of an enhancer, a transcription regulatory region that is somewhat distal from the core promoter and which enhances transcription from that promoter.
|
11 |
P17679 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23772 (/IDA)
P23772 (/IDA)
P46152 (/IDA)
P46153 (/IDA)
(1 more) |
Showing 1 to 10 of 87 entries
There are 543 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
24 |
O09100 (/IDA)
O09100 (/IDA)
P15976 (/IDA)
P17679 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23771 (/IDA)
(14 more) |
|
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
21 |
A0A0R4IB15 (/IGI)
A0A0R4ILP3 (/IGI)
O09100 (/IGI)
O09100 (/IGI)
P17679 (/IGI)
P23769 (/IGI)
P23769 (/IGI)
P23769 (/IGI)
P23769 (/IGI)
P23769 (/IGI)
(11 more) |
|
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
19 |
O09100 (/IMP)
O09100 (/IMP)
P15976 (/IMP)
P17679 (/IMP)
P23769 (/IMP)
P23769 (/IMP)
P23769 (/IMP)
P23769 (/IMP)
P23769 (/IMP)
P23771 (/IMP)
(9 more) |
|
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
18 |
D2HDE5 (/ISS)
E2RPT1 (/ISS)
P23771 (/ISS)
P23825 (/ISS)
P43429 (/ISS)
P43691 (/ISS)
P43693 (/ISS)
P43694 (/ISS)
P43694 (/ISS)
P46152 (/ISS)
(8 more) |
|
Blood coagulation GO:0007596
The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
|
11 |
P15976 (/TAS)
P23769 (/TAS)
P23769 (/TAS)
P23769 (/TAS)
P23769 (/TAS)
P23769 (/TAS)
P23771 (/TAS)
P43694 (/TAS)
P43694 (/TAS)
Q92908 (/TAS)
(1 more) |
|
Myeloid cell differentiation GO:0030099
The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages.
|
11 |
A0A0R4IB15 (/IGI)
A0A0R4ILP3 (/IGI)
Q05AJ3 (/IGI)
Q09JY7 (/IGI)
Q1JQ00 (/IGI)
Q567K8 (/IGI)
Q6NW63 (/IGI)
Q90410 (/IGI)
Q9PTJ1 (/IGI)
Q9PTJ2 (/IGI)
(1 more) |
|
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
11 |
P15976 (/IDA)
P17679 (/IDA)
P23771 (/IDA)
P23772 (/IDA)
P23772 (/IDA)
P43694 (/IDA)
P43694 (/IDA)
P70005 (/IDA)
P97489 (/IDA)
Q08369 (/IDA)
(1 more) |
|
Liver development GO:0001889
The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes.
|
10 | A0A0R4IB15 (/IMP) A0A0R4ILP3 (/IMP) Q09JY7 (/IMP) Q1JQ00 (/IMP) Q567K8 (/IMP) Q61169 (/IMP) Q6NW63 (/IMP) Q9PTJ1 (/IMP) Q9PTJ2 (/IMP) Q9W6U0 (/IMP) |
|
Cardiac right ventricle morphogenesis GO:0003215
The process in which the right cardiac ventricle is generated and organized.
|
10 | D2HDE5 (/ISS) E2RPT1 (/ISS) P23771 (/ISS) P23825 (/ISS) P43694 (/ISS) P43694 (/ISS) Q08DV0 (/ISS) Q08DV0 (/ISS) Q0ZHH4 (/ISS) Q99NH5 (/ISS) |
|
Ventricular septum development GO:0003281
The progression of the ventricular septum over time from its formation to the mature structure.
|
10 | D2HDE5 (/ISS) E2RPT1 (/ISS) P23771 (/ISS) P23825 (/ISS) P43694 (/ISS) P43694 (/ISS) Q08DV0 (/ISS) Q08DV0 (/ISS) Q0ZHH4 (/ISS) Q99NH5 (/ISS) |
Showing 1 to 10 of 543 entries
There are 27 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
36 |
E1C9C6 (/IDA)
I3LUZ9 (/IDA)
O09100 (/IDA)
O09100 (/IDA)
P15976 (/IDA)
P17679 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
P23769 (/IDA)
(26 more) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
11 |
D2HDE5 (/ISS)
E2RPT1 (/ISS)
P23825 (/ISS)
P43693 (/ISS)
P43694 (/ISS)
P43694 (/ISS)
Q08DV0 (/ISS)
Q08DV0 (/ISS)
Q0Q0E4 (/ISS)
Q0ZHH4 (/ISS)
(1 more) |
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
11 |
P15976 (/TAS)
P23769 (/TAS)
P23769 (/TAS)
P23769 (/TAS)
P23769 (/TAS)
P23769 (/TAS)
P23771 (/TAS)
P43694 (/TAS)
P43694 (/TAS)
Q92908 (/TAS)
(1 more) |
|
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
8 | D2HDE5 (/ISS) E2RPT1 (/ISS) P23825 (/ISS) Q08DV0 (/ISS) Q08DV0 (/ISS) Q0ZHH4 (/ISS) Q99NH5 (/ISS) Q9BWX5 (/ISS) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
8 | O09100 (/ISO) O09100 (/ISO) P17679 (/ISO) P23772 (/ISO) P23772 (/ISO) P97489 (/ISO) Q08369 (/ISO) Q61169 (/ISO) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
6 | P52168 (/IC) P52168 (/IC) P70005 (/IC) Q05AJ3 (/IC) Q90410 (/IC) Q99NH5 (/IC) |
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
6 | P23769 (/IDA) P23769 (/IDA) P23769 (/IDA) P23769 (/IDA) P23769 (/IDA) P23771 (/IDA) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
5 | P23769 (/IDA) P23769 (/IDA) P23769 (/IDA) P23769 (/IDA) P23769 (/IDA) |
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
4 | O09100 (/ISO) O09100 (/ISO) P23772 (/ISO) P23772 (/ISO) |
|
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
|
4 | A0A087WZ09 (/IDA) A0A087WZ09 (/IDA) P43694 (/IDA) P43694 (/IDA) |
Showing 1 to 10 of 27 entries
