The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Hnrnp arginine n-methyltransferase1
".
FunFam 3: Protein arginine N-methyltransferase 5
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 37 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Transcription corepressor activity GO:0003714
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to repress the transcription of specific genes. Corepressors often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. A third class occludes DNA-binding transcription factor protein-protein interaction domains. A fourth class of corepressors prevents interactions of DNA bound DNA-binding transcription factor with coactivators.
|
12 |
A7YW45 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
Q4R5M3 (/ISS)
(2 more) |
E-box binding GO:0070888
Interacting selectively and non-covalently with an E-box, a DNA motif with the consensus sequence CANNTG that is found in the promoters of a wide array of genes expressed in neurons, muscle and other tissues.
|
12 |
A7YW45 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
Q4R5M3 (/ISS)
(2 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
9 | O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) Q8CIG8 (/IPI) |
Protein-arginine omega-N symmetric methyltransferase activity GO:0035243
Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.
|
9 | O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) Q9U6Y9 (/IMP) |
P53 binding GO:0002039
Interacting selectively and non-covalently with one of the p53 family of proteins.
|
8 | O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) |
Methyltransferase activity GO:0008168
Catalysis of the transfer of a methyl group to an acceptor molecule.
|
8 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) |
Methyl-CpG binding GO:0008327
Interacting selectively and non-covalently with a methylated cytosine/guanine dinucleotide.
|
8 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) |
Histone-arginine N-methyltransferase activity GO:0008469
Catalysis of the reaction: S-adenosyl-L-methionine + (histone)-arginine = S-adenosyl-L-homocysteine + (histone)-N-methyl-arginine.
|
8 | O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) |
Protein-arginine N-methyltransferase activity GO:0016274
Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.
|
8 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) |
Protein-arginine omega-N symmetric methyltransferase activity GO:0035243
Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.
|
8 | O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) |
Showing 1 to 10 of 37 entries
There are 51 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Circadian regulation of gene expression GO:0032922
Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.
|
12 |
A7YW45 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
Q4R5M3 (/ISS)
(2 more) |
Histone H4-R3 methylation GO:0043985
The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.
|
12 |
A7YW45 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
O14744 (/ISS)
Q4R5M3 (/ISS)
(2 more) |
Peptidyl-arginine methylation GO:0018216
The addition of a methyl group to an arginine residue in a protein.
|
9 | O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) Q9U6Y9 (/IMP) |
Spliceosomal snRNP assembly GO:0000387
The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome.
|
8 | O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) |
Spliceosomal snRNP assembly GO:0000387
The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome.
|
8 | O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) |
DNA-templated transcription, termination GO:0006353
The cellular process that completes DNA-templated transcription; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.
|
8 | O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) |
Regulation of mitotic nuclear division GO:0007088
Any process that modulates the frequency, rate or extent of mitosis.
|
8 | O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) |
Peptidyl-arginine N-methylation GO:0035246
The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein.
|
8 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) |
Endothelial cell activation GO:0042118
The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.
|
8 | O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) |
Histone H4-R3 methylation GO:0043985
The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.
|
8 | O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) |
Showing 1 to 10 of 51 entries
There are 21 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
10 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) Q6NUA1 (/IDA) Q8CIG8 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
10 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) Q6NUA1 (/IDA) Q8GWT4 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
9 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) Q8CIG8 (/IDA) |
Histone methyltransferase complex GO:0035097
A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins.
|
9 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) Q8CIG8 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
8 | O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
8 | O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) |
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
|
8 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
8 | O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) |
Methylosome GO:0034709
A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.
|
8 | O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) |
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
|
5 | A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q6NUA1 (/ISS) Q8CIG8 (/ISS) |
Showing 1 to 10 of 21 entries