The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"beta-sandwich domain of Sec23/24
".
FunFam 2: SEC24 homolog B, COPII coat complex component
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 8 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
17 |
F6VJC5 (/IPI)
O94855 (/IPI)
O95486 (/IPI)
O95487 (/IPI)
P40482 (/IPI)
P40482 (/IPI)
P40482 (/IPI)
P40482 (/IPI)
P53953 (/IPI)
P53992 (/IPI)
(7 more) |
|
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
11 |
A0A286YDI8 (/ISO)
F6VJC5 (/ISO)
G3X972 (/ISO)
Q3U2P1 (/ISO)
Q3U882 (/ISO)
Q3UDH4 (/ISO)
Q3V222 (/ISO)
Q6NXL1 (/ISO)
Q80U83 (/ISO)
Q80ZX0 (/ISO)
(1 more) |
|
SNARE binding GO:0000149
Interacting selectively and non-covalently with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein.
|
6 | A0A286YDI8 (/ISO) G3X972 (/ISO) Q3V222 (/ISO) Q6NXL1 (/ISO) Q80U83 (/ISO) Q8CGF4 (/ISO) |
|
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
5 | O94855 (/IDA) O95486 (/IDA) O95487 (/IDA) P53992 (/IDA) P53992 (/IDA) |
|
Signal sequence binding GO:0005048
Interacting selectively and non-covalently with a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized.
|
4 | P40482 (/IMP) P40482 (/IMP) P40482 (/IMP) P40482 (/IMP) |
|
SNARE binding GO:0000149
Interacting selectively and non-covalently with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein.
|
3 | O94855 (/IPI) P53992 (/IPI) P53992 (/IPI) |
|
Signal sequence binding GO:0005048
Interacting selectively and non-covalently with a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized.
|
3 | A0A0B4LEK8 (/ISS) A1Z813 (/ISS) P53953 (/ISS) |
|
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | Q9USS7 (/ISM) |
Showing 1 to 8 of 8 entries
There are 63 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
|
12 |
A0A286YDI8 (/ISO)
F6VJC5 (/ISO)
G3X972 (/ISO)
Q3U2P1 (/ISO)
Q3U882 (/ISO)
Q3UDH4 (/ISO)
Q3V222 (/ISO)
Q6NXL1 (/ISO)
Q80U83 (/ISO)
Q80ZX0 (/ISO)
(2 more) |
|
COPII-coated vesicle cargo loading GO:0090110
The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.
|
12 |
A0A286YDI8 (/ISO)
F6VJC5 (/ISO)
G3X972 (/ISO)
Q3U2P1 (/ISO)
Q3U882 (/ISO)
Q3UDH4 (/ISO)
Q3V222 (/ISO)
Q6NXL1 (/ISO)
Q80U83 (/ISO)
Q80ZX0 (/ISO)
(2 more) |
|
COPII-coated vesicle cargo loading GO:0090110
The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.
|
10 | O94855 (/IDA) O95486 (/IDA) O95487 (/IDA) P40482 (/IDA) P40482 (/IDA) P40482 (/IDA) P40482 (/IDA) P53953 (/IDA) P53992 (/IDA) P53992 (/IDA) |
|
In utero embryonic development GO:0001701
The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.
|
6 | A0A286YDI8 (/IMP) G3X972 (/IMP) Q3V222 (/IMP) Q6NXL1 (/IMP) Q80U83 (/IMP) Q8CGF4 (/IMP) |
|
COPII-coated vesicle cargo loading GO:0090110
The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.
|
6 | A0A0B4LEK8 (/ISS) A1Z813 (/ISS) A6QNT8 (/ISS) M9PC99 (/ISS) Q3U2P1 (/ISS) Q9VQ94 (/ISS) |
|
Antigen processing and presentation of peptide antigen via MHC class I GO:0002474
The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules.
|
5 | O94855 (/TAS) O95486 (/TAS) O95487 (/TAS) P53992 (/TAS) P53992 (/TAS) |
|
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
|
5 | O94855 (/IMP) O95486 (/IMP) O95487 (/IMP) P53992 (/IMP) P53992 (/IMP) |
|
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
|
5 | O94855 (/TAS) O95486 (/TAS) O95487 (/TAS) P53992 (/TAS) P53992 (/TAS) |
|
Antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0019886
The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.
|
5 | O94855 (/TAS) O95486 (/TAS) O95487 (/TAS) P53992 (/TAS) P53992 (/TAS) |
|
COPII vesicle coating GO:0048208
The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.
|
5 | O94855 (/TAS) O95486 (/TAS) O95487 (/TAS) P53992 (/TAS) P53992 (/TAS) |
Showing 1 to 10 of 63 entries
There are 17 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
COPII vesicle coat GO:0030127
One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state.
|
15 |
C0H5J6 (/IDA)
C0H5J6 (/IDA)
F6VJC5 (/IDA)
O94855 (/IDA)
O95486 (/IDA)
O95487 (/IDA)
P40482 (/IDA)
P40482 (/IDA)
P40482 (/IDA)
P40482 (/IDA)
(5 more) |
|
COPII vesicle coat GO:0030127
One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state.
|
13 |
A0A286YDI8 (/ISO)
F6VJC5 (/ISO)
G3X972 (/ISO)
Q3U2P1 (/ISO)
Q3U882 (/ISO)
Q3UDH4 (/ISO)
Q3V222 (/ISO)
Q6NXL1 (/ISO)
Q80U83 (/ISO)
Q80ZX0 (/ISO)
(3 more) |
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
9 | A0A286YDI8 (/ISO) F6VJC5 (/ISO) G3X972 (/ISO) Q3U882 (/ISO) Q3UDH4 (/ISO) Q3V222 (/ISO) Q80U83 (/ISO) Q80ZX0 (/ISO) Q8CGF4 (/ISO) |
|
COPII vesicle coat GO:0030127
One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state.
|
6 | A0A0B4LEK8 (/ISS) A1Z813 (/ISS) A6QNT8 (/ISS) M9PC99 (/ISS) Q3U2P1 (/ISS) Q9VQ94 (/ISS) |
|
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
|
5 | O94855 (/TAS) O95486 (/TAS) O95487 (/TAS) P53992 (/TAS) P53992 (/TAS) |
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
5 | O94855 (/TAS) O95486 (/TAS) O95487 (/TAS) P53992 (/TAS) P53992 (/TAS) |
|
ER to Golgi transport vesicle membrane GO:0012507
The lipid bilayer surrounding a vesicle transporting substances from the endoplasmic reticulum to the Golgi.
|
5 | O94855 (/TAS) O95486 (/TAS) O95487 (/TAS) P53992 (/TAS) P53992 (/TAS) |
|
Fungal-type vacuole membrane GO:0000329
The lipid bilayer surrounding a vacuole, the shape of which correlates with cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this structure is found in Saccharomyces cerevisiae.
|
4 | P40482 (/HDA) P40482 (/HDA) P40482 (/HDA) P40482 (/HDA) |
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
4 | O95487 (/IDA) P53992 (/IDA) P53992 (/IDA) Q9M291 (/IDA) |
|
COPII-coated ER to Golgi transport vesicle GO:0030134
A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport).
|
4 | F6VJC5 (/ISO) Q3U882 (/ISO) Q3UDH4 (/ISO) Q80ZX0 (/ISO) |
Showing 1 to 10 of 17 entries
