The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: AP complex subunit beta

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 11 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO TermAnnotationsEvidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
53 O35643 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI)
(43 more)
Signal sequence binding GO:0005048
Interacting selectively and non-covalently with a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized.
25 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(15 more)
Clathrin binding GO:0030276
Interacting selectively and non-covalently with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.
25 P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA)
(15 more)
Clathrin binding GO:0030276
Interacting selectively and non-covalently with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.
25 P63010 (/IPI) P63010 (/IPI) P63010 (/IPI) P63010 (/IPI) P63010 (/IPI) P63010 (/IPI) P63010 (/IPI) P63010 (/IPI) P63010 (/IPI) P63010 (/IPI)
(15 more)
Clathrin binding GO:0030276
Interacting selectively and non-covalently with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.
25 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(15 more)
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
25 P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI) P62944 (/IPI)
(15 more)
Clathrin adaptor activity GO:0035615
Bringing together a cargo protein with clathrin, responsible for the formation of endocytic vesicles.
2 Q24253 (/IC) Q960F2 (/IC)
Protein kinase binding GO:0019901
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
1 O35643 (/IPI)
Protein kinase binding GO:0019901
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
1 Q10567 (/ISS)
Clathrin binding GO:0030276
Interacting selectively and non-covalently with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.
1 P52303 (/IC)
Showing 1 to 10 of 11 entries

There are 41 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO TermAnnotationsEvidence
Chemical synaptic transmission GO:0007268
The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.
30 Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP)
(20 more)
Neurotransmitter secretion GO:0007269
The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission.
30 Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP)
(20 more)
Clathrin coat assembly GO:0048268
The process that results in the assembly of clathrin triskelia into the ordered structure known as a clathrin cage.
30 Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP)
(20 more)
Synaptic vesicle endocytosis GO:0048488
A vesicle-mediated transport process, in which the synaptic vesicle membrane constituents are retrieved from the presynaptic membrane on the axon terminal after neurotransmitter secretion by exocytosis. Synaptic vesicle endocytosis can occur via clathrin-dependent and clathrin-independent mechanisms.
30 Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP) Q3ZB97 (/IMP)
(20 more)
Antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0019886
The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.
26 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(16 more)
Clathrin coat assembly GO:0048268
The process that results in the assembly of clathrin triskelia into the ordered structure known as a clathrin cage.
26 P52303 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA)
(16 more)
Regulation of defense response to virus by virus GO:0050690
Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism.
26 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(16 more)
Clathrin-dependent endocytosis GO:0072583
An endocytosis process that begins when material is taken up into clathrin-coated pits, which then pinch off to form clathrin-coated endocytic vesicles.
26 P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA)
(16 more)
Low-density lipoprotein particle receptor catabolic process GO:0032802
The chemical reactions and pathways resulting in the breakdown of a low-density lipoprotein particle receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
25 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(15 more)
Low-density lipoprotein particle clearance GO:0034383
The process in which a low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.
25 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(15 more)
Showing 1 to 10 of 41 entries

There are 33 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO TermAnnotationsEvidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
26 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(16 more)
AP-2 adaptor complex GO:0030122
A heterotetrameric AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits, and links clathrin to the membrane surface of a vesicle, and the cargo receptors during receptor/clathrin mediated endocytosis. Vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles. In at least humans, the AP-2 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different alpha genes (alphaA and alphaC).
26 P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA) P63010 (/IDA)
(16 more)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
25 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(15 more)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
25 P63010 (/HDA) P63010 (/HDA) P63010 (/HDA) P63010 (/HDA) P63010 (/HDA) P63010 (/HDA) P63010 (/HDA) P63010 (/HDA) P63010 (/HDA) P63010 (/HDA)
(15 more)
Clathrin coat GO:0030118
A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes.
25 P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA) P62944 (/IDA)
(15 more)
AP-type membrane coat adaptor complex GO:0030119
Any of several heterotetrameric complexes that link clathrin (or another coat-forming molecule, as hypothesized for AP-3 and AP-4) to a membrane surface; they are found on coated pits and coated vesicles, and mediate sorting of cargo proteins into vesicles. Each AP complex contains two large (a beta and one of either an alpha, gamma, delta, or epsilon) subunits (110-130 kDa), a medium (mu) subunit (approximately 50 kDa), and a small (sigma) subunit (15-20 kDa).
25 P62944 (/TAS) P62944 (/TAS) P62944 (/TAS) P62944 (/TAS) P62944 (/TAS) P62944 (/TAS) P62944 (/TAS) P62944 (/TAS) P62944 (/TAS) P62944 (/TAS)
(15 more)
AP-2 adaptor complex GO:0030122
A heterotetrameric AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits, and links clathrin to the membrane surface of a vesicle, and the cargo receptors during receptor/clathrin mediated endocytosis. Vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles. In at least humans, the AP-2 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different alpha genes (alphaA and alphaC).
25 P63010 (/IMP) P63010 (/IMP) P63010 (/IMP) P63010 (/IMP) P63010 (/IMP) P63010 (/IMP) P63010 (/IMP) P63010 (/IMP) P63010 (/IMP) P63010 (/IMP)
(15 more)
AP-2 adaptor complex GO:0030122
A heterotetrameric AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits, and links clathrin to the membrane surface of a vesicle, and the cargo receptors during receptor/clathrin mediated endocytosis. Vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles. In at least humans, the AP-2 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different alpha genes (alphaA and alphaC).
25 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(15 more)
Endocytic vesicle membrane GO:0030666
The lipid bilayer surrounding an endocytic vesicle.
25 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(15 more)
Clathrin-coated endocytic vesicle membrane GO:0030669
The lipid bilayer surrounding a clathrin-coated endocytic vesicle.
25 P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS) P63010 (/TAS)
(15 more)
Showing 1 to 10 of 33 entries
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