The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Cyclophilin-like
".
FunFam 8: Peptidyl-prolyl cis-trans isomerase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 9 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
44 |
P87051 (/IPI)
Q18445 (/IPI)
Q9NI62 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
(34 more) |
Peptidyl-prolyl cis-trans isomerase activity GO:0003755
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
|
43 |
P87051 (/IDA)
Q9NI62 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
(33 more) |
Peptidyl-prolyl cis-trans isomerase activity GO:0003755
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
|
43 |
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
(33 more) |
Cyclosporin A binding GO:0016018
Interacting selectively and non-covalently with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids.
|
43 |
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
(33 more) |
Cyclosporin A binding GO:0016018
Interacting selectively and non-covalently with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids.
|
41 |
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
(31 more) |
Disordered domain specific binding GO:0097718
Interacting selectively and non-covalently with a disordered domain of a protein.
|
41 |
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
Q9Y3C6 (/IPI)
(31 more) |
Peptidyl-prolyl cis-trans isomerase activity GO:0003755
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
|
2 | Q9D0W5 (/ISO) Q9D0W5 (/ISO) |
Cyclosporin A binding GO:0016018
Interacting selectively and non-covalently with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids.
|
2 | Q9D0W5 (/ISO) Q9D0W5 (/ISO) |
Disordered domain specific binding GO:0097718
Interacting selectively and non-covalently with a disordered domain of a protein.
|
2 | Q9D0W5 (/ISO) Q9D0W5 (/ISO) |
There are 9 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
43 |
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
(33 more) |
Protein peptidyl-prolyl isomerization GO:0000413
The modification of a protein by cis-trans isomerization of a proline residue.
|
43 |
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
(33 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
42 |
Q9W0Q2 (/IC)
Q9Y3C6 (/IC)
Q9Y3C6 (/IC)
Q9Y3C6 (/IC)
Q9Y3C6 (/IC)
Q9Y3C6 (/IC)
Q9Y3C6 (/IC)
Q9Y3C6 (/IC)
Q9Y3C6 (/IC)
Q9Y3C6 (/IC)
(32 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
41 |
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
(31 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
41 |
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
(31 more) |
Protein peptidyl-prolyl isomerization GO:0000413
The modification of a protein by cis-trans isomerization of a proline residue.
|
41 |
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
(31 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
2 | Q9D0W5 (/ISO) Q9D0W5 (/ISO) |
Protein peptidyl-prolyl isomerization GO:0000413
The modification of a protein by cis-trans isomerization of a proline residue.
|
2 | Q9D0W5 (/ISO) Q9D0W5 (/ISO) |
Protein folding GO:0006457
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
|
1 | P87051 (/IC) |
There are 15 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
43 |
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
(33 more) |
U2-type catalytic step 2 spliceosome GO:0071007
A spliceosomal complex that contains the U2, U5 and U6 snRNPs bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the U2, U5 and U6 snRNPs.
|
43 |
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
Q5E992 (/ISS)
(33 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
42 |
Q9NI62 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
(32 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
41 |
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
Q9Y3C6 (/TAS)
(31 more) |
U2-type catalytic step 2 spliceosome GO:0071007
A spliceosomal complex that contains the U2, U5 and U6 snRNPs bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the U2, U5 and U6 snRNPs.
|
41 |
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
(31 more) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
41 |
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
Q9Y3C6 (/IDA)
(31 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | Q9D0W5 (/ISO) Q9D0W5 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
2 | Q9NI62 (/IDA) Q9SIH1 (/IDA) |
U2-type catalytic step 2 spliceosome GO:0071007
A spliceosomal complex that contains the U2, U5 and U6 snRNPs bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the U2, U5 and U6 snRNPs.
|
2 | Q9D0W5 (/ISO) Q9D0W5 (/ISO) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
2 | Q9D0W5 (/ISO) Q9D0W5 (/ISO) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | P87051 (/HDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | P87051 (/HDA) |
Precatalytic spliceosome GO:0071011
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
|
1 | Q9W0Q2 (/HDA) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
1 | Q9W0Q2 (/HDA) |
Post-mRNA release spliceosomal complex GO:0071014
A spliceosomal complex that is formed following the release of the spliced product from the post-spliceosomal complex and contains the excised intron and three snRNPs, including U5.
|
1 | P87051 (/IDA) |