The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"IP3 receptor type 1 binding core, RIH domain
".
FunFam 2: ryanodine receptor isoform X2
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 50 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
20 |
A0A0R4IA72 (/IPI)
A6P4B8 (/IPI)
B0LPN4 (/IPI)
B7WN66 (/IPI)
E9PZQ0 (/IPI)
E9Q401 (/IPI)
F1LMY4 (/IPI)
F1NLZ9 (/IPI)
F1PEE8 (/IPI)
F1QEX9 (/IPI)
(10 more) |
|
Ryanodine-sensitive calcium-release channel activity GO:0005219
Enables the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
|
10 | B0LPN4 (/IDA) E9Q401 (/IDA) F1LMY4 (/IDA) F1LPJ2 (/IDA) F1M7A1 (/IDA) F1PEE8 (/IDA) P11716 (/IDA) P21817 (/IDA) Q92736 (/IDA) Q9TS33 (/IDA) |
|
Calcium channel activity GO:0005262
Enables the facilitated diffusion of a calcium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.
|
7 | B0LPN4 (/ISS) F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) P30957 (/ISS) Q92736 (/ISS) |
|
Ryanodine-sensitive calcium-release channel activity GO:0005219
Enables the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
|
6 | A2AGL3 (/ISS) E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) |
|
Ryanodine-sensitive calcium-release channel activity GO:0005219
Enables the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
|
5 | A6P4B8 (/IMP) B0LPN4 (/IMP) E9PZQ0 (/IMP) F1QEX9 (/IMP) P21817 (/IMP) |
|
Voltage-gated calcium channel activity GO:0005245
Enables the transmembrane transfer of a calcium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
|
Calcium ion binding GO:0005509
Interacting selectively and non-covalently with calcium ions (Ca2+).
|
4 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) |
|
Calmodulin binding GO:0005516
Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
|
4 | B0LPN4 (/ISS) P21817 (/ISS) P30957 (/ISS) Q92736 (/ISS) |
|
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
4 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) |
|
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
4 | E9Q401 (/IPI) P11716 (/IPI) Q92736 (/IPI) Q9TS33 (/IPI) |
Showing 1 to 10 of 50 entries
There are 151 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cellular response to caffeine GO:0071313
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them.
|
10 | A2AGL3 (/ISS) B0LPN4 (/ISS) E9PZQ0 (/ISS) F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) P30957 (/ISS) Q15413 (/ISS) Q92736 (/ISS) |
|
Release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0014808
The process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.
|
6 | A0A060WZC7 (/IMP) E9PZQ0 (/IMP) E9Q401 (/IMP) G1U7D3 (/IMP) P11716 (/IMP) Q92736 (/IMP) |
|
Release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0014808
The process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.
|
6 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) Q92736 (/ISS) |
|
Protein homotetramerization GO:0051289
The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits.
|
6 | A2AGL3 (/ISS) E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) |
|
Cellular response to calcium ion GO:0071277
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.
|
6 | A2AGL3 (/ISS) E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) |
|
Smoothened signaling pathway GO:0007224
A series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened.
|
5 | A0A0R4IA72 (/IMP) A6P4B8 (/IMP) F1QCK4 (/IMP) F1QEX9 (/IMP) Q5RGQ4 (/IMP) |
|
Outflow tract morphogenesis GO:0003151
The process in which the anatomical structures of the outflow tract are generated and organized. The outflow tract is the portion of the heart through which blood flows into the arteries.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
|
Calcium ion transport GO:0006816
The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
4 | E9PZQ0 (/IDA) E9Q401 (/IDA) F1LMY4 (/IDA) Q92736 (/IDA) |
|
Muscle contraction GO:0006936
A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
|
Protein localization to organelle GO:0033365
A process in which a protein is transported to, or maintained in, a location within an organelle.
|
4 | B7WN66 (/IMP) I2HAA6 (/IMP) I2HAA7 (/IMP) Q94279 (/IMP) |
Showing 1 to 10 of 151 entries
There are 60 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Sarcoplasmic reticulum GO:0016529
A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle cell; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage.
|
9 | B0LPN4 (/IDA) E9PZQ0 (/IDA) E9Q401 (/IDA) F1LMY4 (/IDA) I2HAA6 (/IDA) P11716 (/IDA) P30957 (/IDA) Q92736 (/IDA) Q9TS33 (/IDA) |
|
Sarcoplasmic reticulum membrane GO:0033017
The lipid bilayer surrounding the sarcoplasmic reticulum.
|
8 | A2AGL3 (/IDA) B0LPN4 (/IDA) E9PZQ0 (/IDA) E9Q401 (/IDA) F1LMY4 (/IDA) P11716 (/IDA) P21817 (/IDA) Q9TS33 (/IDA) |
|
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
6 | A0A060WZC7 (/IDA) E9PZQ0 (/IDA) E9Q401 (/IDA) G1U7D3 (/IDA) P11716 (/IDA) Q92736 (/IDA) |
|
I band GO:0031674
A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end.
|
5 | B7WN66 (/IDA) I2HAA6 (/IDA) I2HAA7 (/IDA) P21817 (/IDA) Q94279 (/IDA) |
|
Sarcoplasmic reticulum membrane GO:0033017
The lipid bilayer surrounding the sarcoplasmic reticulum.
|
5 | P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) Q92736 (/ISS) |
|
Terminal cisterna GO:0014802
The portion of sarcoplasmic reticulum devoted to calcium ion storage and calcium ion release.
|
4 | A0A060WZC7 (/IDA) F1LMY4 (/IDA) G1U7D3 (/IDA) P11716 (/IDA) |
|
Integral component of organelle membrane GO:0031301
The component of the organelle membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
4 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) |
|
Ryanodine receptor complex GO:1990425
A voltage-gated calcium-release channel complex of the sarcoplasmic or endoplasmic reticulum. It plays an important role in the excitation-contraction (E-C) coupling of muscle cells. RyR comprises a family of ryanodine receptors, widely expressed throughout the animal kingdom.
|
4 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) |
|
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
|
3 | B0LPN4 (/IDA) F1LPJ2 (/IDA) F1M7A1 (/IDA) |
|
Terminal cisterna GO:0014802
The portion of sarcoplasmic reticulum devoted to calcium ion storage and calcium ion release.
|
3 | E9PZQ0 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Showing 1 to 10 of 60 entries
