CATH Superfamily 1.20.58.60
The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 4: Actinin alpha 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 79 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Vinculin binding GO:0017166
Interacting selectively and non-covalently with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Alpha-actinin binding GO:0051393
Interacting selectively and non-covalently with alpha-actinin, one of a family of proteins that cross-link F-actin as antiparallel homodimers. Alpha-actinin has a molecular mass of 93-103 KDa; at the N-terminus there are two calponin homology domains, at the C-terminus there are two EF-hands. These two domains are connected by the rod domain. This domain is formed by triple-helical spectrin repeats.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
39 |
B2R8Y4 (/IPI)
D3ZCV0 (/IPI)
D3ZCV0 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
(29 more) |
Actin filament binding GO:0051015
Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
|
27 |
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
(17 more) |
Ion channel binding GO:0044325
Interacting selectively and non-covalently with one or more specific sites on an ion channel, a protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.
|
22 |
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
O43707 (/IPI)
(12 more) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
21 |
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
(11 more) |
Integrin binding GO:0005178
Interacting selectively and non-covalently with an integrin.
|
15 |
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
(5 more) |
Actin filament binding GO:0051015
Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
|
14 |
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
(4 more) |
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
13 |
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
(3 more) |
Showing 1 to 10 of 79 entries
There are 126 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Sarcomere organization GO:0045214
The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Skeletal muscle fiber development GO:0048741
The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Regulation of apoptotic process GO:0042981
Any process that modulates the occurrence or rate of cell death by apoptotic process.
|
20 |
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
(10 more) |
Platelet degranulation GO:0002576
The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.
|
19 |
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
O43707 (/TAS)
(9 more) |
Positive regulation of cellular component movement GO:0051272
Any process that activates or increases the frequency, rate or extent of the movement of a cellular component.
|
15 |
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
(5 more) |
Positive regulation of cellular component movement GO:0051272
Any process that activates or increases the frequency, rate or extent of the movement of a cellular component.
|
15 |
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
(5 more) |
Vesicle transport along actin filament GO:0030050
Movement of a vesicle along an actin filament, mediated by motor proteins.
|
13 |
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
(3 more) |
Positive regulation of cell migration GO:0030335
Any process that activates or increases the frequency, rate or extent of cell migration.
|
13 |
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
O43707 (/IMP)
(3 more) |
Positive regulation of sodium:proton antiporter activity GO:0032417
Any process that activates or increases the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out).
|
13 |
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
O43707 (/NAS)
(3 more) |
Tumor necrosis factor-mediated signaling pathway GO:0033209
A series of molecular signals initiated by the binding of a tumor necrosis factor to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription.
|
13 |
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
O43707 (/IDA)
(3 more) |
Showing 1 to 10 of 126 entries
There are 94 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Focal adhesion GO:0005925
Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
|
205 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(195 more) |
Stress fiber GO:0001725
A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Zonula adherens GO:0005915
A cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Bicellular tight junction GO:0005923
An occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet; the outer leaflets of the two interacting plasma membranes are seen to be tightly apposed where sealing strands are present. Each sealing strand is composed of a long row of transmembrane adhesion proteins embedded in each of the two interacting plasma membranes.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Lateral plasma membrane GO:0016328
The portion of the plasma membrane at the lateral side of the cell. In epithelial cells, lateral plasma membranes are on the sides of cells which lie at the interface of adjacent cells.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Lamellipodium GO:0030027
A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Smooth muscle dense body GO:0030486
Electron-dense region associated with a smooth muscle contractile fiber.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Cell leading edge GO:0031252
The area of a motile cell closest to the direction of movement.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Sarcolemma GO:0042383
The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Outer dense plaque of desmosome GO:0090636
The desmosomal part containing plakoglobins, plakophilins, the N-termini of desmoplakins, as well as the cytoplasmic tails of the desmosomal cadherins, which together attach the plaque to the plasma membrane.
|
204 |
A0A091D150 (/ISS)
A0A091F494 (/ISS)
A0A091F494 (/ISS)
A0A091G7Q0 (/ISS)
A0A091GWQ5 (/ISS)
A0A091GWQ5 (/ISS)
A0A091HM09 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
A0A091ITT8 (/ISS)
(194 more) |
Showing 1 to 10 of 94 entries