The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"SecY subunit domain
".
FunFam 12: Ssh1p
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 3 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Signal sequence binding GO:0005048
Interacting selectively and non-covalently with a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized.
|
8 | P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
8 | P38353 (/IPI) P38353 (/IPI) P38353 (/IPI) P38353 (/IPI) P38353 (/IPI) P38353 (/IPI) P38353 (/IPI) P38353 (/IPI) |
|
Protein transmembrane transporter activity GO:0008320
Enables the transfer of a protein from one side of a membrane to the other.
|
8 | P38353 (/ISA) P38353 (/ISA) P38353 (/ISA) P38353 (/ISA) P38353 (/ISA) P38353 (/ISA) P38353 (/ISA) P38353 (/ISA) |
There are 2 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
SRP-dependent cotranslational protein targeting to membrane GO:0006614
The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
|
8 | P38353 (/IGI) P38353 (/IGI) P38353 (/IGI) P38353 (/IGI) P38353 (/IGI) P38353 (/IGI) P38353 (/IGI) P38353 (/IGI) |
|
SRP-dependent cotranslational protein targeting to membrane GO:0006614
The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
|
8 | P38353 (/IMP) P38353 (/IMP) P38353 (/IMP) P38353 (/IMP) P38353 (/IMP) P38353 (/IMP) P38353 (/IMP) P38353 (/IMP) |
There are 2 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
|
8 | P38353 (/HDA) P38353 (/HDA) P38353 (/HDA) P38353 (/HDA) P38353 (/HDA) P38353 (/HDA) P38353 (/HDA) P38353 (/HDA) |
|
Ssh1 translocon complex GO:0071261
A translocon complex that contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins (translocon-associated proteins or TRAPs); in budding yeast the core proteins are Ssh1p, Sbh2p, and Sss1p. The Ssh1 translocon complex is involved in the cotranslational pathway of protein transport across the ER membrane, and recognizes proteins bearing strongly hydrophobic signal sequences.
|
8 | P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) P38353 (/IDA) |
