CATH Superfamily 1.10.10.60

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1	MYB-related transcription factor	3764		-	-	98.4
2	Myb family transcription factor	1878	3D	6j5bJ00	-	96.0
3	Iroquois-class homeobox protein IRX	1827		-	-	72.7
4	Meis2 homeobox isoform 2c	1541	3D	5eg0A00	-	86.1
5	POU domain protein	1447	3D	2xsdC02	-	85.2
6	DNA-binding protein Fis	1267	3D	5e3oB00	-	86.3
7	Two-component response regulator	1146	3D	1irzA00	-	96.6
8	Pre-B-cell leukemia transcription factor 1	1130	3D	1lfuP00	-	77.6
9	transcription factor MYB1R1	1115		-	-	88.9
10	Transcriptional activator Myb isoform A	1028	3D	1msfC01	-	94.5
11	Myb transcription factor	956		-	-	91.2
12	Metastasis-associated 1 family, member 3	919	3D	5icnA02	-	96.2
13	DNA-binding transcriptional activator MarA	908	3D	1xs9A01	-	73.8
14	SWI/SNF complex subunit SMARCC2 isoform C	886	3D	2yusA01	-	93.3
24	DNA-directed RNA polymerases I, II, and III subunit	873	3D	5iydJ00	-	97.6
16	Transcriptional activator Myb isoform A	831	3D	1mbfA00	-	94.8
15	Transcription factor RAX3	826		-	-	96.0
17	Homeobox protein antennapedia	816	3D	9antB00	-	73.8
18	Homeobox A10	804	3D	1pufA00	-	69.0
19	Ligand-dependent corepressor isoform 1	763	3D	2cobA01	-	99.2
20	Ceramide synthase 5	752	3D	2cqxA01	-	98.9
21	CDC5 cell division cycle 5-like	749		-	-	71.7
22	ISWI chromatin-remodeling complex ATPase CHR11 isoform A	739	3D	1ofcX02	-	77.1
23	protein REVEILLE 6 isoform X1	720		-	-	87.9
25	Mesoderm induction early response 1, transcriptional regulator	718		-	-	87.7
26	Nuclear receptor corepressor 2 isoform 1	710	3D	4a69D00	-	95.6
27	LIM/homeobox protein Lhx9	705	3D	2dmqA01	-	93.7
28	Paired box protein Pax-6	704	3D	2cueA01	-	49.1
30	DNA-binding transcriptional regulator SoxS	653	3D	1d5yD02	-	67.8
29	Homeobox protein Hox-D4	649		-	-	68.0
31	Homeobox protein	640	3D	2lkxA00	-	66.6
32	Zinc finger and SCAN domain-containing 20	634		-	-	96.3
33	REST corepressor 3	629		-	-	67.6
34	HTH-type transcriptional repressor FabR	628	3D	3lsrA01	-	81.3
35	paired box protein Pax-3 isoform X2	613	3D	3cmyA00	-	54.8
36	Two-component system response regulator	609	3D	1umqA00	-	77.0
38	Homeobox-containing protein 1 isoform X2	584	3D	4j19B01	-	80.5
37	chromodomain-helicase-DNA-binding protein 3 isoform X1	584		-	-	70.5
40	T-cell leukemia homeobox protein 3	565	3D	3a01E00	-	83.9
39	MYB transcription factor	563		-	-	80.1
41	insulin gene enhancer protein ISL-1	549	3D	1bw5A00	-	79.3
43	Hepatocyte nuclear factor 1-beta	548	3D	2da6A00	-	61.4
42	Transcriptional activator Myb isoform A	546		-	-	63.1
44	chromodomain-helicase-DNA-binding protein 9 isoform X1	543		-	-	73.0
45	RNA polymerase sigma-54 factor	534		-	-	70.4
46	SIX homeobox 3	534		-	-	85.0
47	Myb transcription factor	522		-	-	67.1
48	Distal-less homeobox 2	517		-	-	62.0
49	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member	502		-	-	93.9
50	LIM homeobox 6	502		-	-	75.7
51	POU domain protein	486	3D	3d1nL02	-	74.3
52	Arginine-glutamic acid dipeptide RE	483		-	-	88.1
54	One cut domain family member	482	3D	1s7eA02	-	74.5
53	H6 family homeobox 2	480		-	-	66.7
55	Homeobox protein Hox-A5	473		-	-	61.2
56	POU domain protein	462		-	-	41.7
57	Short stature homeobox 2	459		-	-	74.7
59	TGFB-induced factor homeobox 1	458	3D	6fqqE01	-	94.4
58	zinc finger homeobox protein 4	457		-	-	75.3
60	MYB transcription factor	436		-	-	85.6
61	Trihelix transcription factor GT-2	434		-	-	98.9
62	zinc fingers and homeoboxes protein 3	432		-	-	89.5
63	SIX homeobox 2	425		-	-	71.8
64	Zinc finger homeobox protein 4	423	3D	2da1A01	-	90.4
65	Visual system homeobox 1	421		-	-	72.1
66	Paired mesoderm homeobox protein 1	415		-	-	69.2
67	NK6 homeobox 1	409		-	-	57.2
68	Orthodenticle homeobox 1	401	3D	2mgqA00	-	76.8
69	MYB transcription factor	399		-	-	73.5
70	DNA-binding protein SATB	399	3D	2mw8A00	-	77.0
71	Retinal homeobox gene 2	390		-	-	62.9
72	Homeobox protein Hox-B8	379		-	-	55.2
73	Putative LIM/homeobox protein Lhx3	367		-	-	44.9
74	Distal-less homeobox 1	364		-	-	49.1
75	LIM/homeobox protein Lhx1	352		-	-	75.7
76	Homeobox protein knotted-1-like 2	350		-	-	69.4
77	MYB transcription factor	350		-	-	76.1
78	NK2 homeobox 3	350		-	-	71.3
79	MYB transcription factor	347		-	-	75.5
84	Homeobox protein Hox-D13	346	3D	5egoB00	-	77.6
80	Zinc finger homeobox protein 2	345		-	-	74.7
81	Empty spiracles homeobox 2	342		-	-	71.8
82	Putative zinc finger homeobox protein 4	331		-	-	65.4
83	BEL1-like homeodomain protein 4	329		-	-	66.5
85	SIX homeobox 5	324		-	-	74.2
86	transcriptional-regulating factor 1 isoform X1	323		-	-	89.3
87	DNA methyltransferase 1-associated protein 1	322	3D	4iejA00	-	91.1
88	DNA-binding transcriptional regulator NtrC	320	3D	1ntcB00	-	85.1
89	Caudal type homeobox 4	317		-	-	62.3
90	Transcriptional regulator ArgR, AraC family	317	3D	3oioA00	-	83.0
91	CDC5 cell division cycle 5-like	306		-	-	70.0
92	Trihelix transcription factor GT-2	294		-	-	83.8
94	Homeobox protein Hox-A3	293		-	-	62.3
93	ALX homeobox protein 1	293		-	-	53.4
95	LIM homeobox transcription factor 1 beta	289		-	-	55.5
96	Zinc finger homeobox protein 4	286		-	-	41.8
97	barH-like 2 homeobox protein-like	280		-	-	48.5
141	TetR family transcriptional regulator	280	3D	6ho4A01	-	100.0
98	Transcription factor LBX1	279		-	-	60.7
99	MYB transcription factor	276		-	-	69.6
101	NK2 homeobox 8	276	3D	1vndA00	-	75.5
100	AraC family transcriptional regulator	275	3D	3w6vA00	-	28.5
103	Homeobox protein BarH-like 2	273	3D	2dmtA00	-	63.6
102	Aristaless related homeobox	272		-	-	73.3
104	trihelix transcription factor ASIL2	270		-	-	89.7
105	Zinc finger E-box binding homeobox 2	266	3D	2da7A00	-	63.2
106	Chromodomain-helicase-DNA-binding protein 2 isoform 1	257	3D	4b4cA02	-	70.2
107	MYB transcription factor	253		-	-	68.2
108	NK2 homeobox 1	252		-	-	54.3
109	Homeobox protein MOX-2	250		-	-	65.7
110	Transcriptional adapter	250		-	-	91.8
111	Two-component system response regulator GlrR	247		-	-	36.6
113	homeobox protein Hox-B1	247	3D	1b72A00	-	79.3
112	TyrR family transcriptional regulator	246		-	-	72.9
114	cyclin-D-binding Myb-like transcription factor 1 isoform X1	243	3D	2llkA01	-	81.8
115	Transcriptional adapter 2	239	3D	2elkA00	-	95.2
116	Cut-like homeobox 2b	236		-	-	74.9
117	BEL1-like homeodomain protein 9	233		-	-	69.3
118	WUSCHEL-related homeobox 11	228		-	-	84.6
119	Transcription factor GAMYB	227		-	-	76.9
120	pogo transposable element with ZNF domain isoform X1	227		-	-	19.5
122	Zinc finger E-box binding homeobox 1	226	3D	2e19A01	-	70.0
121	Myb transcription factor	226		-	-	70.4
129	Telomeric repeat-binding factor 2	225	3D	3sjmB00	-	94.6
123	HTH-type transcriptional regulator AdiY	224		-	-	34.0
124	Orthopedia homeobox b	223		-	-	41.9
125	diencephalon/mesencephalon homeobox protein 1	220		-	-	31.4
127	homeobox protein aristaless-like 4	216	3D	2m0cA00	-	49.2
126	dorsal root ganglia homeobox protein-like	216		-	-	63.0
128	Putative ZZ-type zinc finger-containing protein 3	214		-	-	64.5
130	Homeobox protein Hox-D12	212		-	-	74.3
131	Ventral anterior homeobox 2	208		-	-	55.1
133	zinc fingers and homeoboxes protein 3	207	3D	2ly9A00	-	79.6
132	AraC family transcriptional regulator	206		-	-	99.5
136	Transcriptional regulator, AraC family	202	3D	4fe7A03	-	32.6
134	Homeobox protein MSX-1	201		-	-	68.0
135	Myb/SANT-like DNA-binding domain containing 1	199		-	-	75.7
137	MYB DNA binding protein	195		-	-	92.3
138	Homeobox protein prophet of Pit-1	194		-	-	65.3
139	cyclin-D-binding Myb-like transcription factor 1 isoform X2	194		-	-	76.1
140	Myb transcription factor	193		-	-	57.9
142	homeobox protein OTX2 isoform X2	183		-	-	47.2
143	homeobox protein knotted-1-like 3 isoform X1	180		-	-	51.8
144	homeobox-leucine zipper protein ATHB-6-like	179		-	-	72.7
145	homeobox protein Hox-A2	176		-	-	62.4
146	WUSCHEL-related homeobox 4	175		-	-	71.4
150	POU domain protein	175	3D	5wc9F02	-	76.3
148	Dek, isoform B	174	3D	1q1vA00	-	89.0
147	GS homeobox 2	174		-	-	61.2
149	AraC family transcriptional regulator	173		-	-	36.0
151	histone H2A deubiquitinase MYSM1 isoform X2	168	3D	2cu7A01	-	93.9
154	Transcription factor SRM1	165	3D	2cjjA00	-	93.6
152	Trihelix transcription factor ASIL2	165		-	-	95.4
153	HTH-type transcriptional regulator EutR	164		-	-	81.4
155	ISWI chromatin-remodeling complex ATPase CHR11	163		-	-	56.0
157	Myb transcription factor	162		-	-	72.2
156	AraC family transcriptional regulator	162		-	-	28.2
161	POU domain protein	159	3D	3l1pB02	-	79.4
158	MYB transcription factor	159		-	-	68.7
159	Homeobox-leucine zipper protein HAT5	158		-	-	73.2
162	trihelix transcription factor GT-1	157	3D	2jmwA01	-	60.3
160	MYB-like transcription factor	157		-	-	87.5
166	homeobox protein Hox-C11	156	3D	5zjtA00	-	76.9
163	Arabinose operon transcriptional regulator	154	3D	2k9sA00	-	26.4
164	Arabinose operon transcriptional regulator	153		-	-	6.0
165	Two-component system nitrogen regulation response regulator NtrX	152		-	-	86.2
167	Homeobox protein engrailed-like	151		-	-	59.5
168	Telomere repeat-binding factor 1	149		-	-	83.5
169	DNA-binding protein SATB1	145		-	-	94.9
170	Transcriptional adapter	143		-	-	86.5
172	Homeobox and leucine zipper protein Homez	143	3D	2eccA00	-	69.8
171	Homeobox transcription factor	141		-	-	71.8
173	brain-specific homeobox protein homolog	139		-	-	58.5
175	Melibiose operon regulatory protein	139		-	-	14.6
174	MYB-related transcription factor	139		-	-	54.0
176	pancreas/duodenum homeobox protein 1	138	3D	2h1kB00	-	82.9
178	hematopoietically-expressed homeobox protein HHEX	136		-	-	41.4
177	Homeobox protein DBX1	136		-	-	49.3
180	DnaJ Hsp40	135	3D	2m2eA00	-	85.3
179	Two component, sigma54 specific, transcriptional regulator, Fis family	135		-	-	81.6
182	Paired like homeobox 2B	133		-	-	61.9
181	HTH-type transcriptional activator RhaS	133		-	-	12.4
183	Transcriptional regulator, TetR family	132		-	-	58.5
184	Chromodomain helicase DNA binding protein 6	132		-	-	71.6
186	Transcriptional regulator, TetR family	131		-	-	0.0
185	MYB transcription factor	131		-	-	55.2
187	homeobox protein DBX2	129		-	-	70.2
193	Ultrabithorax, isoform C	129	3D	4uusE00	-	68.6
188	Anaerobic nitric oxide reductase transcription regulator NorR	128		-	-	48.9
190	Melibiose operon regulatory protein	128		-	-	28.3
189	Homeobox protein engrailed-like	128		-	-	61.6
191	GON-4-like protein isoform X1	127	3D	1ug2A01	-	84.8
194	Zinc fingers and homeoboxes protein 3	125		-	-	75.6
192	Homeobox-leucine zipper protein HAT22	125		-	-	62.0
195	AraC family transcriptional regulator	123		-	-	22.7
196	Multiple antibiotic resistance protein MarA	121	3D	1bl0A02	-	10.8
203	Nanog homeobox transcription factor	120	3D	2vi6H00	-	71.6
197	Homeobox-leucine zipper protein REVOLUTA	120		-	-	62.7
198	MYB transcription factor	117		-	-	79.6
199	Activity-dependent neuroprotector homeobox b	116		-	-	82.1
201	MYB proto-oncogene like 2	116		-	-	62.4
200	Homeobox-leucine zipper protein ATHB-13	116		-	-	67.0
202	REST corepressor 2	112		-	-	56.3
204	transcription factor MYB80	104		-	-	76.8
206	transcription termination factor 1 isoform X1	103		-	-	71.8
205	Transcriptional regulator, AraC family	103		-	-	0.0
208	Zinc fingers and homeoboxes protein 3	102		-	-	95.8
207	paired mesoderm homeobox protein 2A	102		-	-	47.3
212	Zinc fingers and homeoboxes protein 3	101	3D	2da5A00	-	88.7
211	Homeobox and leucine zipper protein Homez	101	3D	2ys9A00	-	74.6
213	Homeodomain-only protein	101	3D	2hi3A01	-	70.3
210	homeobox protein goosecoid	100		-	-	54.9
224	HTH-type transcriptional regulator RutR	100	3D	4xk4C01	-	1.8
214	Homeobox expressed in ES cells 1	100	3D	2k40A00	-	82.6
209	Psp operon transcriptional activator	100		-	-	13.1
215	dnaJ homolog subfamily C member 2 isoform X1	99		-	-	39.2
216	MYB proto-oncogene like 2	98		-	-	52.8
219	LIM/homeobox protein Lhx3	97	3D	5hodD00	-	47.7
218	Myb transcription factor	96		-	-	87.6
217	Transcriptional regulator, AraC family	96		-	-	20.4
221	MYB transcription factor	94		-	-	72.2
222	Transcription factor MYB36	94		-	-	75.4
220	DEK domain-containing chromatin associated protein	94		-	-	89.9
223	Goosecoid homeobox 2	93		-	-	70.5
225	NK3 homeobox 2	93		-	-	52.0
226	Paired box gene 4	93		-	-	63.7
228	Myb-related protein 308	92		-	-	47.4
227	LIM homeobox transcription factor	92		-	-	52.7
229	Homeobox-leucine zipper protein HDG1	92		-	-	85.3
230	POU domain protein	90		-	-	46.4
234	ISWI chromatin-remodeling complex ATPase ISW2	89	3D	2y9zA04	-	86.6
231	Myb transcription factor	89		-	-	69.2
235	Zinc fingers and homeoboxes protein 1	89	3D	3narB00	-	82.9
232	homeobox-leucine zipper protein ATHB-13-like	88		-	-	61.8
233	Distal-less, isoform C	87		-	-	37.8
237	zinc fingers and homeoboxes protein 1	86		-	-	72.4
236	Fis family transcriptional regulator	86		-	-	14.9
238	Aspartate/glutamate/uridylate kinase family protein	85		-	-	71.3
239	Highly divergent homeobox	83		-	-	23.5
240	Zinc fingers and homeoboxes protein 1	83		-	-	36.2
247	Zinc fingers and homeoboxes protein 2	82	3D	3nauB00	-	87.4
242	Homeobox-leucine zipper protein HOX13	82		-	-	74.9
241	homeobox-leucine zipper protein ATHB-40	82		-	-	71.7
244	Highly divergent homeobox	81		-	-	23.5
246	Telomeric repeat-binding factor 2-interacting protein 1	81	3D	1fexA00	-	100.0
243	Motor neuron and pancreas homeobox 1	81		-	-	47.1
245	zinc finger homeobox protein 2	80		-	-	9.6
249	H2.0-like homeobox protein	79		-	-	41.5
248	Gastrulation brain homeobox 2	79		-	-	48.8
251	Zinc finger protein 541	78		-	-	59.1
250	Homeobox protein cut-like	78		-	-	19.5
253	Transcriptional regulator, AraC family	76		-	-	8.2
252	Retinal homeobox protein Rx-B	76		-	-	33.2
254	transcription repressor MYB5-like	75		-	-	78.0
255	DnaJ Hsp40	74		-	-	43.8
257	Zinc-finger homeodomain protein 2	74	3D	1wh5A00	-	92.1
256	Even-skipped homeobox 1	73		-	-	69.1
261	Gastrulation brain homeobox 1	72	3D	2me6A00	-	32.4
258	HTH-type transcriptional regulator ChbR	70		-	-	2.9
262	Zinc fingers and homeoboxes 1	70		-	-	76.3
260	Fis family transcriptional regulator	70		-	-	60.8
259	MYB transcription factor	70		-	-	70.3
264	zinc fingers and homeoboxes protein 2	69		-	-	88.2
265	CASP8-associated protein 2 isoform X1	69	3D	2lr8A00	-	88.8
263	Putative homeodomain-like transcription factor superfamily protein	69		-	-	83.2
267	HTH-type transcriptional regulator GadX	68		-	-	10.8
270	Sigma-54-dependent Fis family transcriptional regulator	68	3D	1ojlD03	-	15.9
266	Distal-less homeobox 4a	68		-	-	45.1
269	Transcription factor MYB46	67		-	-	71.5
268	Transcription factor MYB86	67		-	-	67.2
289	TetR family transcriptional regulator	66	3D	4w97A01	-	78.2
272	zinc fingers and homeoboxes protein 2	65		-	-	74.3
273	MIS18 binding protein 1	65	3D	1wgxA00	-	94.7
271	Homeobox protein MSX-2	65		-	-	51.7
274	Homeobox-leucine zipper protein HOX24	64		-	-	45.5
276	Transcriptional regulator, AraC family	61		-	-	13.6
275	jerky protein homolog	61		-	-	20.7
279	Sugar-binding transcriptional regulator	60		-	-	34.9
277	Pre-B-cell leukemia transcription factor 1	60		-	-	28.2
278	HTH-type transcriptional regulator GadW	60		-	-	6.9
281	DNA-3-methyladenine glycosylase 2	60		-	-	62.6
288	Sex combs reduced	60	3D	2r5zA00	-	28.5
280	jerky protein homolog	60		-	-	36.5
284	Two-component system sensor histidine kinase/response regulator	59		-	-	99.8
283	Transcription factor RAX3	59		-	-	68.7
282	Tigger transposable element derived 5	59		-	-	20.5
287	TSL-kinase interacting protein 1	58		-	-	64.4
286	Homeobox transcription factor	58		-	-	77.9
285	Homeobox protein	58		-	-	28.9
291	ALX homeobox protein 1	55		-	-	62.8
290	homeobox protein Hox-B3	55		-	-	44.7
292	Acetoacetate metabolism regulatory protein AtoC	55		-	-	1.6
293	Homeobox-leucine zipper protein ATHB-7	53		-	-	72.2
296	Scarecrow, isoform A	53		-	-	56.4
295	Distal-less homeobox 4	53		-	-	34.8
294	NK1 transcription factor-related protein 1	53		-	-	31.3
298	Homeobox protein cut-like	52		-	-	81.1
297	AraC family transcriptional regulator	52		-	-	33.9
299	Empty spiracles homeobox 3	52		-	-	63.7
301	Formate hydrogenlyase transcriptional activator	51		-	-	23.2
302	Transcription factor TT2	51		-	-	83.8
300	Myb transcription factor	51		-	-	54.2
303	MYB transcription factor	50		-	-	67.8
305	AraC family transcriptional regulator	49		-	-	4.2
325	Double homeobox protein 4	49	3D	6dfyD00	-	78.9
304	Visual system homeobox	49		-	-	46.3
313	major centromere autoantigen B	48	3D	1iufA02	-	84.5
308	HTH-type transcriptional activator RhaR	48		-	-	0.0
306	Muscle segmentation homeobox	48		-	-	55.1
307	Eyegone, isoform A	48		-	-	46.0
309	HTH-type transcriptional activator RhaR	48		-	-	0.0
310	MYB transcription factor	47		-	-	76.1
311	Zinc fingers and homeoboxes 2a	47		-	-	32.2
312	Mix-type homeobox gene 1	46		-	-	84.9
314	Small nuclear RNA-activating complex, polypeptide 4	46		-	-	93.8
316	Transcription factor MYB15	45		-	-	71.6
315	NK1 homeobox 2	45		-	-	57.8
318	homeobox protein notochord	44		-	-	50.9
321	Small nuclear RNA-activating complex, polypeptide 4	44		-	-	86.3
320	jerky protein homolog-like	44		-	-	10.1
319	Mushroom body large-type Kenyon cell-specific protein 1	44		-	-	17.8
317	homeobox protein abdominal-A	44		-	-	48.4
323	jerky protein homolog-like	43		-	-	11.5
322	Transcription factor TFIIIB component B	43		-	-	76.5
324	Transcription factor MYB3R-2	43		-	-	76.1
326	POU domain protein	41		-	-	46.0
328	MYB transcription factor	41		-	-	54.5
327	Myb transcription factor	41		-	-	43.8
331	major centromere autoantigen B	40	3D	1hlvA01	-	19.0
329	Mix paired-like homeobox	40		-	-	41.7
330	LIM homeobox transcription factor 1 alpha	39		-	-	46.0
332	Motor neuron and pancreas homeobox 2b	39		-	-	38.7
335	DNA-directed RNA polymerase subunit N, putative	39	3D	4qiwV00	-	90.4
337	Chitin synthase 8	37		-	-	77.3
334	Paired mesoderm homeobox protein 2B	37		-	-	38.6
345	Homeobox protein engrailed-like	37	3D	2jwtA00	-	72.7
333	Fis family transcriptional regulator	37		-	-	7.9
336	Transcription factor MYB39	37		-	-	36.8
339	Transcription factor MYB30	36		-	-	57.3
340	Transcriptional adapter	36		-	-	9.8
341	Zinc finger homeobox 2	36		-	-	90.8
338	Homeobox protein Nkx-3.1	36		-	-	50.4
344	Transcription factor MYB44	35		-	-	82.3
347	Regulatory protein Ada	35	3D	1zgwA02	-	8.7
342	trihelix transcription factor PTL-like	35		-	-	54.6
343	Sigma-54-dependent Fis family transcriptional regulator	35		-	-	66.9
349	Transcription factor MYB39	34		-	-	61.1
351	Transcription factor GAMYB	34		-	-	80.0
350	Tigger transposable element derived 6	34		-	-	28.7
346	HTH-type transcriptional regulator ydeO	34		-	-	8.6
348	Transcription factor MYB26	34		-	-	69.5
353	Transcription factor WER	33		-	-	72.3
356	MYB transcription factor	33		-	-	74.9
355	Transcription factor MYB124	33		-	-	92.7
352	Site-specific DNA recombinase	33		-	-	86.8
357	Motor neuron and pancreas homeobox 1	33		-	-	36.5
354	Double homeobox protein 4	33		-	-	68.8
358	Myb-related protein 305	32		-	-	62.5
360	Gastrulation brain homeobox	32		-	-	60.5
359	Tigger transposable element derived 6	32		-	-	23.6
364	Propionate catabolism operon regulatory protein PrpR	31		-	-	11.9
366	Transcriptional coactivator ADA2	31		-	-	76.8
365	Homeobox protein ceh-14	31		-	-	37.1
362	Chitin synthase 6	31		-	-	46.3
376	Chromodomain-helicase-DNA-binding protein 1	31	3D	3tedA02	-	82.8
363	Kismet, isoform D	31		-	-	41.6
361	ESX homeobox 1	31		-	-	71.3
367	homeobox even-skipped homolog protein 2	30		-	-	33.3
368	Transcription factor MYB60	30		-	-	54.7
369	Intestine specific homeobox	29		-	-	73.5
370	AraC family transcriptional regulator	29		-	-	18.4
371	MYB transcription factor	29		-	-	87.6
372	Homeobox B3	28		-	-	26.1
373	Blast:Brain-specific homeobox protein	28		-	-	58.9
374	Arginine-glutamic acid dipeptide repeat protein	27		-	-	84.8
377	DNA-binding E3 ubiquitin-protein ligase	27		-	-	85.3
375	Ventral anterior homeobox 1	27		-	-	41.4
378	Notochord homeobox	27		-	-	64.2
380	Brinker	27	3D	2gloA00	-	14.0
379	Hex homeobox	26		-	-	59.0
438	DNA-invertase Hin	26	3D	1jkrC00	-	7.2
381	Transcription factor MYB119	26		-	-	80.0
383	box A-binding factor	26		-	-	49.8
382	Transcription activator snf2l1, putative	26		-	-	72.8
391	Homeobox transcription factor	25		-	-	77.8
384	Transcriptional regulatory protein TOD6	25		-	-	36.4
387	Replication termination factor 1	25		-	-	84.7
389	Transcriptional regulator, AraC family	25		-	-	38.7
390	YDR026C-like protein	25		-	-	76.7
385	Putative homeobox-leucine zipper protein ATHB-51	25		-	-	57.3
386	AraC family transcriptional regulator	25		-	-	24.9
388	Transcription factor RAX2	25		-	-	70.4
393	Small nuclear RNA activating complex polypeptide 4	24		-	-	31.7
392	sigma-54-dependent Fis family transcriptional regulator	24		-	-	8.9
395	GS homeobox 2	24		-	-	48.7
394	MYB transcription factor	24		-	-	88.6
407	MYB transcription factor	23		-	-	68.1
404	Transcription factor MYB97	23		-	-	74.5
396	NOBOX oogenesis homeobox	23		-	-	57.2
398	Homeobox protein lin-39	23		-	-	63.1
400	Orthopedia, isoform H	23		-	-	40.9
406	TetR family transcriptional regulator	23		-	-	34.6
397	Blast:Homeobox protein Hmx	23		-	-	41.6
405	AraC family transcriptional regulator	23		-	-	23.6
402	Transcription factor MYB113	23		-	-	75.9
421	Mating-type protein ALPHA2	23	3D	1mnmD00	-	0.0
403	Transcription repressor MYB4	23		-	-	47.0
399	Homeobox protein B-H1	23		-	-	40.1
401	Uncharacterized protein, isoform A	23		-	-	9.6
414	Transcription factor RAX3	22		-	-	72.6
417	Even-skipped homeobox 1	22		-	-	76.7
409	Sigma-54-dependent Fis family transcriptional regulator	22		-	-	17.9
408	Sigma-54 dependent transcriptional regulator	22		-	-	28.3
411	Transcription factor TRY	22		-	-	72.0
413	Myb-like DNA-binding domain containing protein	22		-	-	100.0
412	Anomalous homeobox	22		-	-	80.5
415	Transcriptional activator MltR	22		-	-	27.0
416	Myb family transcription factor	22		-	-	97.6
410	Homeobox-leucine zipper protein HOX25-like	22		-	-	32.1
512	Pyruvate carboxylase, mitochondrial	21	3D	3bg9D04	-	71.0
419	Homeobox protein Hox-D4	21		-	-	37.9
424	ANTP homeobox protein	21		-	-	69.8
422	Transcriptional regulator, Fis family	21		-	-	0.0
425	Homeobox and leucine zipper encoding a	21		-	-	42.4
420	Uncharacterized protein, isoform A	21		-	-	11.4
423	Slingshot protein phosphatase 1a	21		-	-	80.8
418	Homeobox protein engrailed-like	21		-	-	29.2
429	AraC family transcriptional regulator	20		-	-	12.7
430	Chromatin remodeling protein	20		-	-	5.8
431	Set3C deacetylase complex subunit	20		-	-	80.5
427	Transcription factor MYB59	20		-	-	39.4
426	NK3 homeobox 1	20		-	-	45.4
428	Transcription factor MYB39	20		-	-	59.3
432	SWR1-complex protein 4	19		-	-	76.5
435	Transcription factor MYB124	19		-	-	38.1
441	Homeotic protein bicoid	19	3D	1zq3P00	-	3.6
436	Intermediate neuroblasts defective	19		-	-	72.2
433	Reproductive homeobox 2B	19		-	-	75.9
434	Transcription termination factor 1	19		-	-	82.1
437	pathogenesis-related homeodomain protein	19		-	-	73.7
443	Transcription factor MYB36	18		-	-	72.6
440	NK7.1, isoform A	18		-	-	44.1
446	Egg-laying defective protein 27	18		-	-	3.9
448	LIM/homeobox protein Lhx4	18		-	-	71.3
442	DNA methyltransferase 1-associated protein 1	18		-	-	9.3
445	Transcription factor MYB96	18		-	-	58.2
439	Cramped chromatin regulator homolog 1	18		-	-	75.7
447	ISWI chromatin-remodeling complex ATPase ISW2	18		-	-	73.7
444	AraC family transcriptional regulator	18		-	-	85.2
449	MYB-related transcription factor	18		-	-	72.4
459	Transcriptional regulator, TetR family	17		-	-	2.6
461	Sigma-54-dependent Fis family transcriptional regulator	17		-	-	47.8
454	Even-skipped homeobox 2	17		-	-	33.2
462	ISPsy4, transposase	17		-	-	88.7
460	Homebox and aldo/keto reductase	17		-	-	9.8
457	Trihelix transcription factor GTL2	17		-	-	51.8
455	Transcription factor MYB1	17		-	-	0.0
452	Chromatin complexes subunit BAP18	17		-	-	77.2
456	ISVch4 transposase, OrfA	17		-	-	24.6
450	Homeobox protein notochord	17		-	-	60.8
542	Terminase small subunit	17	3D	4dyrB01	-	0.0
458	Transcription factor MYB86	17		-	-	54.4
451	Homeobox protein vent1	17		-	-	76.1
453	Unplaced genomic scaffold supercont1.84, whole genome shotgun sequence	17		-	-	74.6
480	Si:ch73-376l24.4	16		-	-	90.6
473	Transcriptional regulator, AraC family	16		-	-	6.6
471	Homeobox domain protein	16		-	-	25.4
463	RNA polymerase sigma-54 factor	16		-	-	52.2
478	AraC family transcriptional regulator	16		-	-	10.7
465	Sequence-specific DNA binding transcription factor	16		-	-	45.0
476	MYB-related transcription factor	16		-	-	28.8
470	Trihelix transcription factor ASR3	16		-	-	11.0
468	Distal-less homeobox 6	16		-	-	25.0
472	HTH-type transcriptional regulator AppY	16		-	-	3.5
466	Transcription factor TFIIIB subunit	16		-	-	72.6
475	Transcription factor MYB36	16		-	-	75.8
464	DNA invertase	16		-	-	17.0
477	Pdc2p	16		-	-	23.7
474	Blast:Protein gooseberry-neuro	16		-	-	32.9
467	Os03g0412900 protein	16		-	-	88.1
469	Homeobox protein ceh-30	16		-	-	36.2
479	Homebox and aldo/keto reductase	16		-	-	14.8
486	Divergent paired-related homeobox	15		-	-	16.2
488	DnaJ-like protein subfamily C member 2	15		-	-	33.0
485	Rhox homeobox family member 1	15		-	-	40.1
482	Homeobox protein TOS8	15		-	-	43.3
483	Predicted protein	15		-	-	77.2
481	Hydrogenase-4 transcriptional activator	15		-	-	0.0
567	Transcriptional regulator CmeR	15	3D	3qqaA01	-	18.9
490	Transcription activator snf2l1, putative	15		-	-	9.4
492	AraC family transcriptional regulator	15		-	-	46.9
489	Fis family transcriptional regulator	15		-	-	11.2
487	TetR family transcriptional regulator	15		-	-	20.7
491	Imitation switch isoform alias nucleosome remodeling factor 140 kDa subunit	15		-	-	17.0
484	Chromatin modification-related protein EAF1	15		-	-	76.9
503	Myb-like transcription factor 2	14		-	-	53.7
499	Siamois homeodomain 1	14		-	-	81.5
501	Unplaced genomic scaffold supercont1.172, whole genome shotgun sequence	14		-	-	71.2
497	Uncharacterized protein, isoform B	14		-	-	8.8
500	Telomeric repeat-binding factor a	14		-	-	91.0
506	NK6 homeobox 1	14		-	-	56.1
502	myb protein	14		-	-	52.0
528	DNA-binding protein RAP1	14	3D	4gfbA02	-	3.7
494	Snt1p	14		-	-	41.3
505	Homeodomain-like transcriptional regulator	14		-	-	74.8
496	GL13020	14		-	-	13.9
498	Transcription factor	14		-	-	86.8
495	Transcription factor MYB14	14		-	-	73.6
504	Transcription factor RFX3	14		-	-	59.3
493	Homeobox protein Ved	14		-	-	69.5
515	Transcription factor MYB7	13		-	-	75.5
518	Two-component system sensor histidine kinase/response regulator	13		-	-	71.9
516	Transcription factor Toy	13		-	-	34.7
510	Pdc2p	13		-	-	4.1
508	Homeodomain transcription factor BW10a	13		-	-	9.6
608	DDE-recombinase A	13	3D	4fcyB01	-	14.0
511	Bacterial regulatory s, tetR family protein	13		-	-	2.5
513	Chromatin-remodeling complex ATPase chain	13		-	-	19.5
507	transcription factor LBX2	13		-	-	20.4
519	Homeobox transcription factor	13		-	-	77.2
514	Uncharacterized protein, isoform C	13		-	-	68.5
517	MYB-related transcription factor	13		-	-	71.9
509	TetR family transcriptional regulator	13		-	-	15.7
521	SWR1-complex protein 4	12		-	-	78.3
534	Chromosome 1, whole genome shotgun sequence	12		-	-	85.0
523	Homeobox protein egl-5	12		-	-	26.8
525	TetR family transcriptional regulator	12		-	-	8.6
522	HTH-type transcriptional regulator	12		-	-	2.2
520	homeobox protein VENTX	12		-	-	52.0
526	Transcriptional regulator, TetR family	12		-	-	0.0
531	Transcription factor	12		-	-	6.4
524	cDNA FLJ16624 fis, clone TESTI4015442, moderately similar to Mus musculus zinc finger homeodomain 4 Zfh4-pending	12		-	-	72.2
633	TCP pilus virulence regulatory protein ToxT	12	3D	5suwA03	-	3.8
527	Zinc Finger and Homeobox	12		-	-	31.7
533	Homeobox-leucine zipper protein ATHB-52	12		-	-	74.4
529	upstream activation factor subunit spp27	12		-	-	13.8
532	C. Elegans Homeobox	12		-	-	59.2
530	Sigma-54-dependent transcriptional response regulator PilR	12		-	-	46.7
569	telomere repeats-binding bouquet formation protein 1	11	3D	1x58A01	-	60.8
551	Predicted protein	11		-	-	71.4
553	Homeobox protein ceh-5	11		-	-	70.6
537	AraC family transcriptional regulator	11		-	-	0.0
549	Myb like transcription factor	11		-	-	25.5
679	Homeobox protein aristaless	11	3D	3lnqA00	-	59.8
552	LIM homeobox transcription factor 1 beta	11		-	-	29.2
539	Uncharacterized protein, isoform A	11		-	-	17.5
547	transcription factor AS1-like	11		-	-	15.3
550	Homeobox domaincontaining protein	11		-	-	93.9
544	Cell division control protein, putative	11		-	-	30.0
540	HOP homeobox	11		-	-	14.3
546	AraC family transcriptional regulator	11		-	-	7.8
548	PTS-dependent dihydroxyacetone kinase operon regulatory protein	11		-	-	0.0
545	Unplaced genomic scaffold supercont1.28, whole genome shotgun sequence	11		-	-	6.9
543	Homeobox and leucine zipper encoding a	11		-	-	13.0
535	Sigma-54 dependent transcriptional regulator	11		-	-	0.0
541	mRNA, clone: RTFL01-36-L09	11		-	-	16.2
538	AraC family transcriptional regulator	11		-	-	7.0
536	SWR1-complex protein 4	11		-	-	40.7
603	Putative phage transposase	10	3D	4fcyB02	-	0.0
564	AraC family transcriptional regulator	10		-	-	0.0
577	Homeobox-leucine zipper protein 18	10		-	-	77.8
555	Homeobox domain containing protein 10	10		-	-	32.3
574	Homeobox protein CHOX-CAD2	10		-	-	87.3
556	SIX homeobox 9	10		-	-	62.9
558	Transcriptional regulator, AraC family	10		-	-	0.0
576	Double homeobox B-like 1	10		-	-	8.4
570	Transcriptional adaptor ADA2, putative	10		-	-	82.5
562	Myb-related protein 315	10		-	-	55.0
565	DNA methylation and regulatory protein	10		-	-	44.9
554	POU domain, class 5, transcription factor 2	10		-	-	28.1
568	Pathogenesis-related homeodomain protein	10		-	-	71.7
557	Unplaced genomic scaffold supercont2.9, whole genome shotgun sequence	10		-	-	21.1
575	Transcription factor MYB30	10		-	-	64.1
572	Fis family transcriptional regulator	10		-	-	0.0
560	Probable transposase	10		-	-	54.7
566	TetR family transcriptional regulator	10		-	-	1.8
561	Transcription factor MYB75	10		-	-	49.2
559	Unplaced genomic scaffold supercont1.71, whole genome shotgun sequence	10		-	-	8.4
573	Transcription factor Rap1, putative AFU_orthologue AFUA_6G07560	10		-	-	82.9
563	Putative myb transcription factor	10		-	-	38.1
571	Two-component system response regulator	10		-	-	0.0
593	L-rhamnose operon transcriptional activator RhaR	9		-	-	6.0
587	SWITCH/sucrose nonfermenting 3A	9		-	-	18.7
579	Homeodomain-like transcriptional regulator	9		-	-	79.6
601	Repressor activator protein	9		-	-	1.0
591	Transcriptional regulator, AraC/XylS family	9		-	-	8.7
584	Unplaced genomic scaffold supercont1.70, whole genome shotgun sequence	9		-	-	12.5
590	Cyclin-D-binding Myb transcription factor 1	9		-	-	50.5
596	Putative DNAj-like protein	9		-	-	38.3
606	Resolvase TnpR	9		-	-	0.0
600	Pyruvate carboxylase	9		-	-	54.9
598	Two-component system sensor histidine kinase/response regulator	9		-	-	10.6
595	Transcriptional regulator AraC/XylS family	9		-	-	4.3
605	Pyrroline-5-carboxylate reductase	9		-	-	9.5
592	AraC/XylS family transcriptional regulator	9		-	-	0.0
602	Chitin synthase	9		-	-	19.6
589	AEL176Cp	9		-	-	68.8
583	Uncharacterized protein	9		-	-	5.0
578	Helicase/SANT-associated, DNA binding protein	9		-	-	44.9
607	DNA-binding protein SATB1	9		-	-	8.1
597	Putative DNAj-like protein	9		-	-	43.7
581	Homeobox protein six1a	9		-	-	82.1
594	Pre-mRNA-splicing factor CEF1	9		-	-	15.3
604	CRE-ZAG-1 protein	9		-	-	1.9
580	Reproductive homeobox on X chromosome 11	9		-	-	84.2
586	LIM domain family	9		-	-	11.3
588	Transcription factor MYB36	9		-	-	41.0
582	HTH-type transcriptional regulator VirS	9		-	-	2.3
585	Chromodomain-helicase-DNA-binding protein 3	9		-	-	12.6
599	Two-component system sensor histidine kinase	9		-	-	72.2
609	Homeobox B4	9		-	-	48.6
612	PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN	8		-	-	0.0
615	Distal-less homeobox 4	8		-	-	26.7
621	Lhx1/5 LIM homeobox protein	8		-	-	34.9
634	Transcriptional regulator, AraC/XylS family	8		-	-	6.2
610	MmsAB operon regulatory protein	8		-	-	0.0
616	BAP	8		-	-	27.5
623	Transcription factor MYB4	8		-	-	63.3
637	Bric-a-brac	8		-	-	11.3
618	FRIGIDA interacting protein 2	8		-	-	10.8
647	One cut domain family member	8		-	-	88.8
611	MmsAB operon regulatory protein	8		-	-	0.0
622	DNA-binding transcriptional regulator	8		-	-	9.4
625	Transcriptional regulator, AraC/XylS family	8		-	-	6.9
639	V-myb avian myeloblastosis viral oncogene homolog-like 2b	8		-	-	37.7
613	Probable transcriptional regulatory protein	8		-	-	0.0
628	Myb-like DNA-binding domain containing protein, putative	8		-	-	6.3
644	MYB transcription factor	8		-	-	57.1
626	Transcription factor LAF1-like	8		-	-	5.2
620	Mechanosensory protein 3	8		-	-	23.0
631	Chitin synthase 6	8		-	-	70.8
624	Myb-related protein Myb4	8		-	-	19.3
646	Sensor histidine kinase TodS	8		-	-	23.1
640	Putative Myb-like transcription factor	8		-	-	85.7
619	Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3	8		-	-	10.3
627	Transcriptional regulator AraC/XylS family	8		-	-	9.2
642	MYB transcription factor	8		-	-	56.4
645	Os07g0634900 protein	8		-	-	64.2
632	Zinc finger protein 1	8		-	-	14.7
635	3-methyladenine DNA glycosylase	8		-	-	19.8
629	L-rhamnose operon transcriptional activator RhaR	8		-	-	3.8
643	Transcription factor MYB14 isoform A	8		-	-	80.7
614	Uncharacterized protein	8		-	-	70.9
636	Protein CHROMATIN REMODELING 4	8		-	-	18.3
630	Photoperiod independent early flowering protein	8		-	-	41.2
617	ISPsy13, transposase OrfA	8		-	-	0.0
638	Sigma-54-dependent Fis family transcriptional regulator	8		-	-	8.8
641	myb protein	8		-	-	54.1
651	AraC family transcriptional regulator	7		-	-	2.3
669	Helicase, putative	7		-	-	6.0
649	C. Elegans Homeobox	7		-	-	76.2
653	GARP-like protein 2	7		-	-	7.2
655	Myb family DNA-binding domain containing protein	7		-	-	0.0
664	Myb-related protein 306	7		-	-	20.6
677	Sigma-54 dependent response regulator	7		-	-	0.0
652	Os01g0308000 protein	7		-	-	6.9
658	Homeobox and leucine zipper encoding a	7		-	-	42.3
721	Hematopoietically-expressed homeobox protein HHEX	7	3D	2e1oA01	-	44.4
650	Ventral homeobox	7		-	-	29.8
656	AraC family transcriptional regulator	7		-	-	0.0
674	3-methyladenine DNA glycosylase	7		-	-	10.7
667	AraC family transcriptional regulator	7		-	-	8.7
654	Homeobox transcription factor	7		-	-	0.0
665	Myb domain protein 101	7		-	-	1.8
670	Helicase putative	7		-	-	4.7
676	Phosphoglycerate transport system transcriptional regulatory protein PgtA	7		-	-	0.0
648	GD18444	7		-	-	52.7
662	Transcriptional regulator, AraC/XylS family	7		-	-	0.0
678	C. Elegans Homeobox	7		-	-	71.7
672	Ribonuclease J	7		-	-	6.0
666	HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein	7		-	-	26.8
660	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	7		-	-	7.0
675	Probable transcriptional regulator	7		-	-	0.0
657	Uncharacterized protein	7		-	-	4.3
668	Adenosinetriphosphatase	7		-	-	13.7
659	Myb domain protein 4r1	7		-	-	59.6
673	Two-component system sensor histidine kinase	7		-	-	9.7
661	Transcription repressor MYB5	7		-	-	50.9
680	Cone-rod homeobox, opposite strand	7		-	-	94.4
671	Protein CHROMATIN REMODELING 5	7		-	-	7.3
663	GD19964	7		-	-	14.5
687	Middle operon regulator	6		-	-	0.0
713	Gon4-like family protein	6		-	-	81.0
693	Reproductive homeobox 3A	6		-	-	3.2
705		6		-	-	45.5
702	SWIB complex BAF60b domain-containing protein	6		-	-	2.2
684	Homeodomain-like superfamily protein	6		-	-	22.4
708	Uncharacterized protein	6		-	-	84.1
700	Transcriptional regulator, AraC/XylS family	6		-	-	0.0
706	NK2b	6		-	-	53.3
711	Homeobox protein HAT3.1	6		-	-	67.7
691	AraC family transcriptional regulator	6		-	-	12.4
698	Anthocyanin regulatory C1 protein	6		-	-	13.7
701	TetR family transcriptional regulator	6		-	-	0.0
696	Myb-related protein 306	6		-	-	30.5
690	Transcriptional regulator, AraC/XylS family	6		-	-	5.9
710	Paired box 7a	6		-	-	62.2
689	AraC family transcriptional regulator	6		-	-	3.7
692	AraC family transcriptional regulator	6		-	-	0.0
712	V-myb avian myeloblastosis viral oncogene homolog-like 2a	6		-	-	38.9
695	MYB transcription factor MYB48	6		-	-	25.5
703	Putative SNF2 family helicase	6		-	-	9.5
709	GG10235	6		-	-	53.6
697	Myb transcription factor	6		-	-	32.7
683	Muscle wasted, isoform D	6		-	-	14.3
694	Transcription factor MYB10	6		-	-	38.6
681	NifA/NtrC family transcriptional regulator	6		-	-	0.0
688	Homeobox transcription factor RfeB	6		-	-	9.2
704	Sigma-54 activator protein ActB	6		-	-	15.1
686	Os01g0127450 protein	6		-	-	5.7
707	Dlx	6		-	-	49.3
699	MYB transcription factor 84	6		-	-	21.3
685	Earthbound 2, isoform A	6		-	-	2.4
682	Predicted protein	6		-	-	56.1
756	Uncharacterized protein	5		-	-	81.8
750	Hybrid sensor histidine kinase/response regulator	5		-	-	17.8
720	NK1 homeobox 2	5		-	-	35.4
726	Oocyte-specific homeobox 3	5		-	-	23.2
758	Hybrid sensor histidine kinase/response regulator	5		-	-	17.3
728	Transcription factor protein	5		-	-	29.8
744	MYB transcription factor	5		-	-	36.2
755	Transcription factor MYB36	5		-	-	80.4
722	Homeobox protein pal-1	5		-	-	56.8
764		5		-	-	68.1
752	Transcriptional adapter 2A	5		-	-	53.5
739	Arginine-fifty homeobox	5		-	-	16.8
725	C. Elegans Homeobox	5		-	-	59.5
747		5		-	-	4.8
723	Vent homeobox 2	5		-	-	63.6
737	Homeobox protein DBX1	5		-	-	6.5
718	Sigma-54-dependent Fis family transcriptional regulator	5		-	-	0.0
753		5		-	-	33.5
749	Two-component system sensor histidine kinase/response regulator	5		-	-	7.8
716		5		-	-	0.0
751	Two-component system sensor histidine kinase/response regulator	5		-	-	4.7
734	Homeobox protein Rhox5	5		-	-	10.6
715	One cut domain family member	5		-	-	62.4
717	Putative acetoin operon transcriptional activator	5		-	-	17.5
738	MYB-like 2	5		-	-	14.7
741		5		-	-	32.2
763	Zinc finger homeobox 2	5		-	-	44.7
730	homeobox protein slou	5		-	-	5.1
736	Protein CBR-CEH-1	5		-	-	13.1
743	Transcription factor MYB57	5		-	-	74.3
714	Sigma-54 dependent transcriptional regulator	5		-	-	0.0
759		5		-	-	0.0
732	Homeobox protein ceh-8	5		-	-	10.8
761		5		-	-	75.0
729	Msx-type homeobox protein	5		-	-	29.8
735	Putative transcription factor gt-2	5		-	-	11.4
742	Transcription termination factor, RNA polymerase I	5		-	-	26.0
745	Uncharacterized protein, isoform A	5		-	-	17.6
733	NANOG neighbor homeobox	5		-	-	13.0
760	Mu phage middle operon regulator Mor	5		-	-	84.0
727	C. Elegans Homeobox	5		-	-	85.8
757	Hybrid sensor histidine kinase/response regulator	5		-	-	7.9
740		5		-	-	59.4
746		5		-	-	16.9
719	Homeobox protein orthopedia-like Protein	5		-	-	38.1
754	RCOR REST CO-Repressor	5		-	-	45.3
731	Nkx1-1	5		-	-	11.9
724	Homeobox protein vex1	5		-	-	67.8
762	Homeobox protein Hox-B8	5		-	-	36.1
748	Nucleolar protein	5		-	-	11.0
792	Extraembryonic, spermatogenesis, homeobox 1	4		-	-	1.6
795		4		-	-	5.8
774	Homeobox protein NANOG	4		-	-	16.3
767		4		-	-	28.9
789		4		-	-	2.0
819		4		-	-	38.8
807	Telomeric repeat-binding factor 2-interacting protein 1	4		-	-	0.0
777	Homeobox protein dsc-1	4		-	-	25.6
790		4		-	-	17.0
796	Homeobox and leucine zipper encoding a	4		-	-	0.0
804		4		-	-	12.1
798	Two-component system sensor histidine kinase/response regulator	4		-	-	11.1
779	Ladybird homeobox 2	4		-	-	26.8
791		4		-	-	10.6
784	Homeobox protein Hox-C3a	4		-	-	0.0
814		4		-	-	84.9
793		4		-	-	10.5
769		4		-	-	35.3
809		4		-	-	0.0
817		4		-	-	6.5
787		4		-	-	13.6
803		4		-	-	0.0
785		4		-	-	3.8
815	NK3 homeobox 3	4		-	-	40.0
782		4		-	-	0.0
812		4		-	-	10.8
821	Notochord homeobox	4		-	-	54.1
799		4		-	-	70.8
771		4		-	-	56.1
810		4		-	-	17.0
816		4		-	-	17.5
780		4		-	-	34.6
786		4		-	-	10.5
801		4		-	-	0.0
788		4		-	-	0.0
773		4		-	-	62.9
818	Zinc fingers and homeoboxes 3	4		-	-	23.3
781		4		-	-	28.5
768		4		-	-	50.9
811		4		-	-	22.7
806		4		-	-	0.0
800		4		-	-	43.9
772		4		-	-	82.3
766		4		-	-	1.8
794		4		-	-	20.9
775	Muscle segment homeobox 2a	4		-	-	27.2
877	CENP-B homolog protein 1	4	3D	1iufA01	-	73.2
808		4		-	-	0.0
822	MIS18-binding protein 1	4		-	-	47.2
802		4		-	-	0.0
783	AraC family transcriptional regulator	4		-	-	0.0
805		4		-	-	0.0
778		4		-	-	22.7
813		4		-	-	49.4
820		4		-	-	53.2
765		4		-	-	71.7
797	Two-component system sensor histidine kinase/response regulator, hybrid One-component system	4		-	-	31.8
776		4		-	-	9.5
770		4		-	-	46.3
848		3		-	-	0.0
913		3		-	-	34.2
862		3		-	-	14.1
870		3		-	-	1.2
876		3		-	-	34.0
824		3		-	-	16.6
905		3		-	-	7.5
831		3		-	-	52.1
897		3		-	-	0.0
865		3		-	-	0.0
854		3		-	-	2.1
902		3		-	-	0.0
878		3		-	-	17.1
883		3		-	-	10.0
846		3		-	-	7.8
840		3		-	-	0.0
857		3		-	-	5.1
900		3		-	-	11.5
906		3		-	-	49.4
875		3		-	-	56.2
894		3		-	-	0.0
911		3		-	-	18.6
827		3		-	-	21.1
866	Dharma	3		-	-	0.0
860	Homeotic protein caudal	3		-	-	11.8
872		3		-	-	9.2
833		3		-	-	41.4
845		3		-	-	15.6
908		3		-	-	21.6
868		3		-	-	11.2
842		3		-	-	0.0
881		3		-	-	0.0
901		3		-	-	0.0
835		3		-	-	8.2
829		3		-	-	37.2
861		3		-	-	2.9
832		3		-	-	40.4
873		3		-	-	38.0
888		3		-	-	64.6
916		3		-	-	57.8
859		3		-	-	12.9
910		3		-	-	24.6
886		3		-	-	0.0
843		3		-	-	11.8
880		3		-	-	9.5
836		3		-	-	24.5
830		3		-	-	33.8
863		3		-	-	11.3
912		3		-	-	31.3
871		3		-	-	2.3
899		3		-	-	0.0
915		3		-	-	38.1
903		3		-	-	0.0
841		3		-	-	0.0
882		3		-	-	16.9
838		3		-	-	18.0
885		3		-	-	10.7
887		3		-	-	0.0
917		3		-	-	67.3
834		3		-	-	79.8
909		3		-	-	29.9
869		3		-	-	0.0
851		3		-	-	8.1
893		3		-	-	0.0
849		3		-	-	8.8
884		3		-	-	1.9
891		3		-	-	0.0
853		3		-	-	0.0
879		3		-	-	18.9
837		3		-	-	22.8
914		3		-	-	39.5
823		3		-	-	8.2
898		3		-	-	11.5
847		3		-	-	0.0
896		3		-	-	0.0
890	CHD gene family protein containing chromodomain, helicase domain, and DNA-binding domain	3		-	-	76.2
825		3		-	-	37.9
839		3		-	-	10.4
852		3		-	-	15.9
904		3		-	-	7.1
864		3		-	-	10.7
855		3		-	-	6.5
844		3		-	-	0.0
828		3		-	-	30.9
858		3		-	-	11.1
889		3		-	-	52.8
826		3		-	-	44.2
874		3		-	-	32.2
867		3		-	-	7.3
895	Chromatin remodeling factor CHD3 PICKLE	3		-	-	0.0
907		3		-	-	75.5
850		3		-	-	11.8
856		3		-	-	11.8
892		3		-	-	4.4
989		2		-	-	11.5
958		2		-	-	0.0
1014		2		-	-	8.9
1057		2		-	-	0.0
928		2		-	-	48.7
1073		2		-	-	0.0
944		2		-	-	0.0
1027		2		-	-	0.0
992		2		-	-	4.7
956		2		-	-	2.0
950		2		-	-	0.0
1025		2		-	-	0.0
1056		2		-	-	0.0
995		2		-	-	0.0
967		2		-	-	11.5
974		2		-	-	0.0
1055		2		-	-	0.0
1026		2		-	-	0.0
920		2		-	-	4.6
926		2		-	-	39.8
1067		2		-	-	0.0
1007		2		-	-	0.0
947		2		-	-	0.0
1043		2		-	-	0.0
998		2		-	-	21.7
1034		2		-	-	0.0
955		2		-	-	0.0
922		2		-	-	29.3
1006		2		-	-	0.0
1066		2		-	-	0.0
977		2		-	-	8.2
964		2		-	-	0.0
952		2		-	-	3.5
1005		2		-	-	0.0
939		2		-	-	16.4
925		2		-	-	36.0
1065		2		-	-	9.6
990		2		-	-	0.0
996		2		-	-	0.0
1072		2		-	-	0.0
984		2		-	-	0.0
1041		2		-	-	0.0
1017		2		-	-	0.0
1054		2		-	-	0.0
949		2		-	-	8.9
1024		2		-	-	9.6
923		2		-	-	31.0
1070		2		-	-	0.0
1016		2		-	-	0.0
937		2		-	-	11.9
918		2		-	-	50.0
979		2		-	-	0.0
953		2		-	-	1.0
991		2		-	-	0.0
1015		2		-	-	0.0
1049		2		-	-	0.0
1048		2		-	-	0.0
1064		2		-	-	45.9
1004		2		-	-	10.8
1071		2		-	-	0.0
987		2		-	-	11.0
1042		2		-	-	5.4
1037		2		-	-	45.9
1078		2		-	-	38.5
993		2		-	-	0.0
1079		2		-	-	40.5
951		2		-	-	3.1
1035		2		-	-	0.0
969		2		-	-	0.0
921		2		-	-	11.8
934		2		-	-	45.6
1036		2		-	-	40.3
1040		2		-	-	5.7
1029		2		-	-	0.0
1028		2		-	-	0.0
1060		2		-	-	9.4
999		2		-	-	0.0
1000		2		-	-	52.2
971		2		-	-	0.0
1059		2		-	-	2.6
963		2		-	-	12.8
1058		2		-	-	0.0
930		2		-	-	48.6
936		2		-	-	27.9
985		2		-	-	5.8
1051		2		-	-	0.0
1044		2		-	-	0.0
1062		2		-	-	0.0
938		2		-	-	9.6
1002		2		-	-	23.0
982		2		-	-	0.0
1021		2		-	-	0.0
941		2		-	-	8.6
1080		2		-	-	43.4
1033		2		-	-	0.0
1081		2		-	-	45.6
959		2		-	-	0.0
988		2		-	-	7.9
973		2		-	-	0.0
932		2		-	-	47.7
961		2		-	-	13.5
1020		2		-	-	0.0
1009		2		-	-	7.1
1069		2		-	-	0.0
1008		2		-	-	9.6
929		2		-	-	46.1
935		2		-	-	53.6
1068		2		-	-	32.6
1050		2		-	-	0.0
1022		2		-	-	0.0
1061		2		-	-	0.0
1013		2		-	-	3.2
980		2		-	-	0.0
1001		2		-	-	40.8
943		2		-	-	3.4
986		2		-	-	5.1
1074		2		-	-	47.4
1052		2		-	-	5.8
933		2		-	-	49.4
972		2		-	-	0.0
960		2		-	-	0.0
966		2		-	-	0.0
927		2		-	-	43.1
1030		2		-	-	51.1
1046		2		-	-	0.0
994		2		-	-	8.2
975		2		-	-	7.3
1018		2		-	-	3.5
1019		2		-	-	0.0
957		2		-	-	0.0
1045		2		-	-	15.1
981		2		-	-	0.0
1003		2		-	-	23.3
1063		2		-	-	0.0
1011		2		-	-	0.0
942		2		-	-	0.0
968		2		-	-	10.3
1047		2		-	-	0.0
1032		2		-	-	0.0
945		2		-	-	0.0
954		2		-	-	0.0
1075		2		-	-	46.0
1038		2		-	-	0.0
965		2		-	-	0.0
1039		2		-	-	0.0
997		2		-	-	0.0
931		2		-	-	48.6
1076		2		-	-	48.0
924		2		-	-	31.1
976		2		-	-	0.0
970		2		-	-	0.0
962		2		-	-	8.4
1010		2		-	-	0.0
948		2		-	-	0.0
1053		2		-	-	0.0
940		2		-	-	20.0
1031		2		-	-	0.0
946		2		-	-	6.5
983		2		-	-	1.3
1077		2		-	-	53.7
978		2		-	-	0.0
919		2		-	-	0.0
1023		2		-	-	0.0
1012		2		-	-	0.0
1142		1		-	-	0.0
1290		1		-	-	0.0
1171		1		-	-	0.0
1137		1		-	-	0.0
1091		1		-	-	0.0
1309		1		-	-	0.0
1205		1		-	-	0.0
1308		1		-	-	0.0
1265		1		-	-	0.0
1193		1		-	-	0.0
1287		1		-	-	0.0
1104		1		-	-	0.0
1206		1		-	-	0.0
1266		1		-	-	0.0
1164		1		-	-	0.0
1136		1		-	-	0.0
1140		1		-	-	0.0
1234		1		-	-	0.0
1285		1		-	-	0.0
1292		1		-	-	0.0
1243		1		-	-	0.0
1135		1		-	-	0.0
1184		1		-	-	0.0
1286		1		-	-	0.0
1301		1		-	-	0.0
1099		1		-	-	0.0
1267		1		-	-	0.0
1178		1		-	-	0.0
1207		1		-	-	0.0
1179		1		-	-	0.0
1098		1		-	-	0.0
1299		1		-	-	0.0
1124		1		-	-	0.0
1255		1		-	-	0.0
1298		1		-	-	0.0
1226		1		-	-	0.0
1086		1		-	-	0.0
1300		1		-	-	0.0
1117		1		-	-	0.0
1154		1		-	-	0.0
1225		1		-	-	0.0
1256		1		-	-	0.0
1092		1		-	-	0.0
1085		1		-	-	0.0
1141		1		-	-	0.0
1172		1		-	-	0.0
1115		1		-	-	0.0
1227		1		-	-	0.0
1149		1		-	-	0.0
1148		1		-	-	0.0
1302		1		-	-	0.0
1087		1		-	-	0.0
1273		1		-	-	0.0
1116		1		-	-	0.0
1214		1		-	-	0.0
1257		1		-	-	0.0
1090		1		-	-	0.0
1170		1		-	-	0.0
1291		1		-	-	0.0
1192		1		-	-	0.0
1185		1		-	-	0.0
1236		1		-	-	0.0
1134		1		-	-	0.0
1240		1		-	-	0.0
1310		1		-	-	0.0
1284		1		-	-	0.0
1186		1		-	-	0.0
1143		1		-	-	0.0
1235		1		-	-	0.0
1107		1		-	-	0.0
1167		1		-	-	0.0
1278		1		-	-	0.0
1279		1		-	-	0.0
1190		1		-	-	0.0
1271		1		-	-	0.0
1242		1		-	-	0.0
1237		1		-	-	0.0
1312		1		-	-	0.0
1165		1		-	-	0.0
1105		1		-	-	0.0
1293		1		-	-	0.0
1187		1		-	-	0.0
1166		1		-	-	0.0
1264		1		-	-	0.0
1204		1		-	-	0.0
1106		1		-	-	0.0
1249		1		-	-	0.0
1127		1		-	-	0.0
1215		1		-	-	0.0
1248		1		-	-	0.0
1093		1		-	-	0.0
1173		1		-	-	0.0
1216		1		-	-	0.0
1114		1		-	-	0.0
1157		1		-	-	0.0
1270		1		-	-	0.0
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