CATH Superfamily 4.10.1000.10

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1	zinc finger CCCH domain-containing protein 15-like	813	3D	1m9oA00	-	96.9
2	Zinc finger protein 36, C3H1 type-like 1	628		-	-	86.6
3	Zinc finger CCCH domain-containing protein	420		-	-	98.1
4	roquin-1 isoform X2	366		-	-	84.0
5	cleavage and polyadenylation specificity factor subunit 4	314	3D	2rhkD00	-	63.9
6	Putative pre-mrna-splicing factor rbm22	270		-	-	90.7
7	Zinc finger CCCH domain-containing protein 6	223		-	-	74.8
8	zinc finger CCCH domain-containing protein 3	206		-	-	93.4
9	probable helicase with zinc finger domain	191		-	-	59.7
10	zinc finger CCCH domain-containing protein 15	167		-	-	73.1
11	Zinc finger CCCH domain-containing protein 11	162		-	-	72.9
12	cleavage and polyadenylation specificity factor subunit 4	149		-	-	86.6
13	zinc finger CCCH domain-containing protein 4 isoform X1	136		-	-	61.3
14	Zinc finger CCCH domain-containing protein 1	133		-	-	50.2
15	Zinc finger CCCH domain-containing protein 13	127		-	-	18.3
16	Zinc finger CCCH domain-containing protein	119		-	-	85.7
17	Cleavage and polyadenylation specificity factor 30 kDa subunit	108		-	-	89.7
18	Zinc finger protein	107		-	-	99.1
19	cleavage and polyadenylation specificity factor subunit 4 isoform X2	97		-	-	61.1
20	Translation machinery-associated protein 46	93		-	-	73.1
21	Zinc finger CCCH domain-containing protein 17	80		-	-	75.9
22	Zinc finger CCCH domain-containing protein 7	78		-	-	93.5
23	Zinc finger CCCH domain-containing protein 18	73		-	-	20.0
24	Zinc finger CCCH domain-containing protein 11A	65		-	-	70.0
25	Zinc finger matrin-type protein 5	57		-	-	81.3
26	Zinc finger CCCH domain-containing protein 11A	42		-	-	78.5
27	Zinc finger protein, putative	41		-	-	14.5
28	Zinc finger nuclease 2	40		-	-	78.4
29	tRNA-dihydrouridine 47 P +	37		-	-	95.1
30	CCCH type zinc finger protein	35		-	-	75.1
32	Zinc finger CCCH-type containing 7A	33		-	-	13.3
31	Cleavage and polyadenylation specific factor 4	33		-	-	7.6
33	zinc finger CCCH domain-containing protein 37	31		-	-	85.2
34	pre-mRNA-splicing factor RBM22	28		-	-	30.9
36	Zinc finger CCCH domain-containing protein 4	28		-	-	59.4
35	CCCH zinc finger protein, variant	28		-	-	90.5
37	Zinc finger CCCH domain-containing protein 39	25		-	-	69.9
38	putative ATP-dependent RNA helicase DHX57	25		-	-	33.2
39	Putative RNA helicase family protein	21		-	-	79.5
40	tRNA guanine(26 2	21		-	-	20.4
41	Pre-mRNA-splicing factor CWC24	16		-	-	35.2
42	Gar2 protein	16		-	-	17.0
43	tRNA methyltransferase 44 homolog	14		-	-	85.3
44	Probable E3 ubiquitin-protein ligase makorin-2	13		-	-	83.2
46	Pre-mRNA-splicing factor CWC24	12		-	-	22.2
45	Zinc finger, CCCH-type	12		-	-	73.2
47	Makorin ring finger protein 1	12		-	-	3.6
48	ZFP family member	10		-	-	44.8
51	Cleavage and polyadenylation specificity factor 30 kDa subunit	10		-	-	39.7
53	Putative zinc finger CCCH domain-containing protein 48	10		-	-	59.2
49	Protein CBG18471	10		-	-	65.5
50	AGAP008634-PA	10		-	-	74.9
52	Zinc finger CCCH domain-containing protein 33	10		-	-	8.3
56	Uncharacterized protein	9		-	-	10.3
58	putative cleavage and polyadenylation specificity factor subunit 4-like protein	9		-	-	67.3
55	Uncharacterized protein	9		-	-	3.4
57	Expressed protein	9		-	-	22.9
54	RING finger protein unkempt homolog	9		-	-	12.6
59	Putative zinc finger CCCH domain-containing protein 48	8		-	-	7.3
60	Probable E3 ubiquitin-protein ligase makorin-3	7		-	-	42.6
62	Uncharacterized protein	7		-	-	37.2
61	Zinc finger CCCH domain-containing protein 3	7		-	-	42.5
65	Cysteine three histidine 1	5		-	-	64.8
67	Zinc finger C-x8-C-x5-C-x3-H type family protein	5		-	-	16.3
68	Zinc finger C-x8-C-x5-C-x3-H type And similar	5		-	-	13.6
63	Zinc finger C-x8-C-x5-C-x3-H type And similar	5		-	-	8.1
64	Putative zinc finger domain-containing protein	5		-	-	4.6
66	Zinc finger, matrin-type 5	5		-	-	49.4
78	Zinc finger protein family member, putative	4		-	-	0.0
80	Zinc finger CCCH domain-containing protein 3	4		-	-	13.0
69	Uncharacterized protein	4		-	-	15.5
76	Zinc finger CCCH domain-containing protein 62	4		-	-	40.3
71	Zinc finger protein family member	4		-	-	0.0
74	GM22131	4		-	-	11.2
72	Zinc finger protein family member	4		-	-	0.0
81	Uncharacterized protein	4		-	-	74.6
77	Zinc finger C-x8-C-x5-C-x3-H type family protein	4		-	-	0.0
79	PAN2-PAN3 deadenylation complex subunit PAN3	4		-	-	4.3
70	Uncharacterized protein	4		-	-	25.8
75	Zinc finger CCCH domain-containing protein 42	4		-	-	37.1
73	Hypothetical_protein_-_conserved	4		-	-	9.2
89	Zinc finger CCCH domain-containing protein 37	3		-	-	8.5
92	Uncharacterized protein	3		-	-	10.4
82	Uncharacterized protein	3		-	-	55.4
90	Zinc finger C-x8-C-x5-C-x3-H type family protein	3		-	-	6.5
84	RING finger protein unkempt homolog	3		-	-	15.1
96	Zinc finger protein, putative	3		-	-	64.4
85	FI03239p	3		-	-	0.0
94	Zinc finger CCCH domain-containing protein 34 isoform A	3		-	-	5.4
87	Zinc finger CCCH domain-containing protein 33	3		-	-	0.0
91	GH07148p	3		-	-	14.9
93	Key regulator in ER unfolded protein response	3		-	-	0.0
83	Zinc finger C-x8-C-x5-C-x3-H type family protein	3		-	-	33.1
95	C3H-type transcription factor	3		-	-	44.3
86	Zinc finger CCCH domain-containing protein 64	3		-	-	12.9
88	Uncharacterized protein	3		-	-	35.3
112	Predicted protein	2		-	-	43.1
105	Uncharacterized protein	2		-	-	1.3
99	Zinc finger CCCH domain-containing protein 19	2		-	-	0.0
110	Expressed protein	2		-	-	1.3
103	Uncharacterized protein	2		-	-	0.0
117	Predicted protein	2		-	-	39.1
109	Zinc finger C-x8-C-x5-C-x3-H type family protein	2		-	-	0.0
98	Uncharacterized protein	2		-	-	12.6
107	Nuclear fragile X mental retardation-interacting protein 1-domain-containing protein	2		-	-	0.0
115	Zinc finger CCCH domain-containing protein 3 isoform A	2		-	-	0.0
111	Predicted protein	2		-	-	0.0
113	Predicted protein	2		-	-	40.5
102	Uncharacterized protein	2		-	-	7.0
100	Uncharacterized protein	2		-	-	0.0
101	Uncharacterized protein	2		-	-	3.4
116	CCCH-type zinc finger-containing protein	2		-	-	45.9
108	An-Nup2 Nuclear pore complex protein Eurofung	2		-	-	0.0
106	CCCH zinc finger protein AFU_orthologue AFUA_8G04360	2		-	-	0.0
114	Predicted protein	2		-	-	0.0
104	Uncharacterized protein	2		-	-	41.2
97	Uncharacterized protein	2		-	-	17.2
129	Uncharacterized protein	1		-	-	0.0
124	Uncharacterized protein	1		-	-	0.0
131	Predicted protein	1		-	-	0.0
148	Protein CBG07225	1		-	-	0.0
157	Predicted protein	1		-	-	0.0
141	tRNA-dihydrouridine 47 P +	1		-	-	0.0
119	Predicted protein	1		-	-	0.0
126	Uncharacterized protein	1		-	-	0.0
143	Uncharacterized protein	1		-	-	0.0
133	Uncharacterized protein	1		-	-	0.0
137	Uncharacterized protein	1		-	-	0.0
154	zinc finger CCCH domain-containing protein 10 isoform X2	1		-	-	0.0
147	Zinc finger protein	1		-	-	0.0
135	Predicted protein	1		-	-	0.0
145	Uncharacterized protein	1		-	-	0.0
152	Zinc finger CCCH-type-containing 10	1		-	-	0.0
121	Uncharacterized protein	1		-	-	0.0
130	Uncharacterized protein	1		-	-	0.0
140	Cleavage and polyadenylation specificity factor subunit 4-like Protein	1		-	-	0.0
150	Dosage compensation regulator-like Protein	1		-	-	0.0
159	Uncharacterized protein	1		-	-	0.0
123	Uncharacterized protein	1		-	-	0.0
142	Predicted protein	1		-	-	0.0
128	Uncharacterized protein	1		-	-	0.0
158	Uncharacterized protein	1		-	-	0.0
132	Uncharacterized protein	1		-	-	0.0
149	Uncharacterized protein	1		-	-	0.0
139	LP05025p	1		-	-	0.0
144	Uncharacterized protein	1		-	-	0.0
125	Uncharacterized protein	1		-	-	0.0
156	Uncharacterized protein	1		-	-	0.0
118	Pharynx and intestine in excess protein 1	1		-	-	0.0
134	AGL116Cp	1		-	-	0.0
127	Uncharacterized protein	1		-	-	0.0
153	Uncharacterized protein	1		-	-	0.0
136	Uncharacterized protein	1		-	-	0.0
155	Uncharacterized protein	1		-	-	0.0
120	Zinc finger CCCH domain-containing protein 17	1		-	-	0.0
146	tRNA guanine(26 2	1		-	-	0.0
151	Uncharacterized protein	1		-	-	0.0
138	Uncharacterized protein	1		-	-	0.0
122	Uncharacterized protein	1		-	-	0.0