The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Cyclic phosphodiesterase
".
FunFam 15: U6 snRNA phosphodiesterase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 2 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
5 | Q12208 (/IPI) Q12208 (/IPI) Q12208 (/IPI) Q12208 (/IPI) Q12208 (/IPI) |
|
Poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends GO:1990838
Catalysis of 3' exonucleolytic cleavage of poly(U), to form poly(U)-N containing a 3' uridine cyclic phosphate (U>P).
|
5 | Q12208 (/ISS) Q12208 (/ISS) Q12208 (/ISS) Q12208 (/ISS) Q12208 (/ISS) |
There are 2 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
U6 snRNA 3'-end processing GO:0034477
Any process involved in forming the mature 3' end of a U6 snRNA molecule.
|
5 | Q12208 (/IGI) Q12208 (/IGI) Q12208 (/IGI) Q12208 (/IGI) Q12208 (/IGI) |
|
U6 snRNA 3'-end processing GO:0034477
Any process involved in forming the mature 3' end of a U6 snRNA molecule.
|
5 | Q12208 (/IMP) Q12208 (/IMP) Q12208 (/IMP) Q12208 (/IMP) Q12208 (/IMP) |
There are 5 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
5 | Q12208 (/HDA) Q12208 (/HDA) Q12208 (/HDA) Q12208 (/HDA) Q12208 (/HDA) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
5 | Q12208 (/IDA) Q12208 (/IDA) Q12208 (/IDA) Q12208 (/IDA) Q12208 (/IDA) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
5 | Q12208 (/HDA) Q12208 (/HDA) Q12208 (/HDA) Q12208 (/HDA) Q12208 (/HDA) |
|
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
5 | Q12208 (/HDA) Q12208 (/HDA) Q12208 (/HDA) Q12208 (/HDA) Q12208 (/HDA) |
|
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
5 | Q12208 (/IDA) Q12208 (/IDA) Q12208 (/IDA) Q12208 (/IDA) Q12208 (/IDA) |