The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Vaccinia Virus protein VP39
".
FunFam 83: 7SK snRNA methylphosphate capping enzyme
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 12 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
RNA polymerase II transcription factor binding GO:0001085
Interacting selectively and non-covalently with an RNA polymerase II transcription factor, any protein required to initiate or regulate transcription by RNA polymerase II.
|
2 | Q7K480 (/IPI) Q7K480 (/IPI) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
2 | Q7K480 (/IPI) Q7K480 (/IPI) |
Methyltransferase activity GO:0008168
Catalysis of the transfer of a methyl group to an acceptor molecule.
|
2 | Q7K480 (/ISS) Q7K480 (/ISS) |
RNA methyltransferase activity GO:0008173
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.
|
2 | A3KQ55 (/ISS) Q8K3A9 (/ISS) |
S-adenosylmethionine-dependent methyltransferase activity GO:0008757
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
|
2 | A3KQ55 (/ISS) Q8K3A9 (/ISS) |
SnRNA binding GO:0017069
Interacting selectively and non-covalently with a small nuclear RNA (snRNA).
|
2 | Q7K480 (/IDA) Q7K480 (/IDA) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
1 | Q7L2J0 (/HDA) |
RNA methyltransferase activity GO:0008173
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.
|
1 | Q7L2J0 (/IDA) |
RNA methyltransferase activity GO:0008173
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.
|
1 | Q7L2J0 (/IMP) |
RNA methyltransferase activity GO:0008173
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.
|
1 | Q8K3A9 (/ISO) |
S-adenosylmethionine-dependent methyltransferase activity GO:0008757
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
|
1 | Q7L2J0 (/IDA) |
S-adenosylmethionine-dependent methyltransferase activity GO:0008757
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
|
1 | Q8K3A9 (/ISO) |
There are 16 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
RNA methylation GO:0001510
Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.
|
2 | A3KQ55 (/ISS) Q8K3A9 (/ISS) |
SnRNA metabolic process GO:0016073
The chemical reactions and pathways involving snRNA, small nuclear RNA, any of various low-molecular-mass RNA molecules found in the eukaryotic nucleus as components of the small nuclear ribonucleoprotein.
|
2 | A3KQ55 (/ISS) Q8K3A9 (/ISS) |
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
2 | Q7K480 (/IMP) Q7K480 (/IMP) |
Methylation GO:0032259
The process in which a methyl group is covalently attached to a molecule.
|
2 | Q7K480 (/ISS) Q7K480 (/ISS) |
Developmental process GO:0032502
A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition.
|
2 | Q7K480 (/IMP) Q7K480 (/IMP) |
SnRNA modification GO:0040031
The covalent alteration of one or more nucleotides within snRNA, resulting in a change in the properties of the snRNA.
|
2 | A3KQ55 (/ISS) Q8K3A9 (/ISS) |
Heterochromatin organization involved in chromatin silencing GO:0070868
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin and contributes to chromatin silencing.
|
2 | Q7K480 (/IMP) Q7K480 (/IMP) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
1 | Q8K3A9 (/IGI) |
RNA methylation GO:0001510
Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.
|
1 | Q7L2J0 (/IDA) |
RNA methylation GO:0001510
Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.
|
1 | Q8K3A9 (/ISO) |
SnRNA metabolic process GO:0016073
The chemical reactions and pathways involving snRNA, small nuclear RNA, any of various low-molecular-mass RNA molecules found in the eukaryotic nucleus as components of the small nuclear ribonucleoprotein.
|
1 | Q7L2J0 (/IDA) |
SnRNA metabolic process GO:0016073
The chemical reactions and pathways involving snRNA, small nuclear RNA, any of various low-molecular-mass RNA molecules found in the eukaryotic nucleus as components of the small nuclear ribonucleoprotein.
|
1 | Q8K3A9 (/ISO) |
Negative regulation of chromatin binding GO:0035562
Any process that stops or reduces the frequency, rate or extent of chromatin binding. Chromatin binding is the selective interaction with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
1 | Q8K3A9 (/IGI) |
SnRNA modification GO:0040031
The covalent alteration of one or more nucleotides within snRNA, resulting in a change in the properties of the snRNA.
|
1 | Q7L2J0 (/IDA) |
SnRNA modification GO:0040031
The covalent alteration of one or more nucleotides within snRNA, resulting in a change in the properties of the snRNA.
|
1 | Q8K3A9 (/ISO) |
Positive regulation of G1/S transition of mitotic cell cycle GO:1900087
Any signalling pathway that increases or activates a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.
|
1 | Q8K3A9 (/IMP) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | Q7K480 (/IDA) Q7K480 (/IDA) |