The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Leucine Aminopeptidase, subunit E, domain 1
".
FunFam 2: Core histone macro-H2A
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 26 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
55 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(45 more) |
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
53 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(43 more) |
Chromatin DNA binding GO:0031490
Interacting selectively and non-covalently with DNA that is assembled into chromatin.
|
53 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(43 more) |
Nucleosomal DNA binding GO:0031492
Interacting selectively and non-covalently with the DNA portion of a nucleosome.
|
35 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(25 more) |
RDNA binding GO:0000182
Interacting selectively and non-covalently with DNA sequences encoding ribosomal RNA.
|
34 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(24 more) |
RNA polymerase II core promoter sequence-specific DNA binding GO:0000979
Interacting selectively and non-covalently with a DNA sequence that is part of the core promoter of a RNA polymerase II-transcribed gene.
|
34 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(24 more) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
34 |
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
(24 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
34 |
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
(24 more) |
Double-stranded methylated DNA binding GO:0010385
Interacting selectively and non-covalently with double-stranded methylated DNA. Methylation of cytosine or adenine in DNA is an important mechanism for establishing stable heritable epigenetic marks.
|
34 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(24 more) |
Enzyme binding GO:0019899
Interacting selectively and non-covalently with any enzyme.
|
34 |
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
(24 more) |
Protein kinase binding GO:0019901
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
|
34 |
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
O75367 (/IPI)
(24 more) |
Protein serine/threonine kinase inhibitor activity GO:0030291
Stops, prevents or reduces the activity of a protein serine/threonine kinase.
|
34 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(24 more) |
Nucleosomal DNA binding GO:0031492
Interacting selectively and non-covalently with the DNA portion of a nucleosome.
|
34 |
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
(24 more) |
Promoter-specific chromatin binding GO:1990841
Interacting selectively and non-covalently with a section of chromatin that is associated with gene promoter sequences of DNA.
|
34 |
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
O75367 (/ISS)
(24 more) |
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Chromatin DNA binding GO:0031490
Interacting selectively and non-covalently with DNA that is assembled into chromatin.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
RDNA binding GO:0000182
Interacting selectively and non-covalently with DNA sequences encoding ribosomal RNA.
|
1 | Q9QZQ8 (/ISO) |
RNA polymerase II core promoter sequence-specific DNA binding GO:0000979
Interacting selectively and non-covalently with a DNA sequence that is part of the core promoter of a RNA polymerase II-transcribed gene.
|
1 | Q9QZQ8 (/ISO) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
1 | Q9QZQ8 (/IDA) |
Double-stranded methylated DNA binding GO:0010385
Interacting selectively and non-covalently with double-stranded methylated DNA. Methylation of cytosine or adenine in DNA is an important mechanism for establishing stable heritable epigenetic marks.
|
1 | Q9QZQ8 (/ISO) |
Enzyme binding GO:0019899
Interacting selectively and non-covalently with any enzyme.
|
1 | Q9QZQ8 (/ISO) |
Protein kinase binding GO:0019901
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
|
1 | Q9QZQ8 (/ISO) |
Protein serine/threonine kinase inhibitor activity GO:0030291
Stops, prevents or reduces the activity of a protein serine/threonine kinase.
|
1 | Q9QZQ8 (/ISO) |
Nucleosomal DNA binding GO:0031492
Interacting selectively and non-covalently with the DNA portion of a nucleosome.
|
1 | Q9QZQ8 (/ISO) |
Promoter-specific chromatin binding GO:1990841
Interacting selectively and non-covalently with a section of chromatin that is associated with gene promoter sequences of DNA.
|
1 | Q9QZQ8 (/IDA) |
There are 40 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
53 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(43 more) |
Dosage compensation GO:0007549
Compensating for the variation in the unpaired sex chromosome:autosome chromosome ratios between sexes by activation or inactivation of genes on one or both of the sex chromosomes.
|
53 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(43 more) |
Positive regulation of keratinocyte differentiation GO:0045618
Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation.
|
53 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(43 more) |
Negative regulation of gene expression, epigenetic GO:0045814
Any epigenetic process that stops, prevents or reduces the rate of gene expression.
|
53 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(43 more) |
Establishment of protein localization to chromatin GO:0071169
The directed movement of a protein to a part of a chromosome that is organized into chromatin.
|
53 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(43 more) |
Negative regulation of transcription of nucleolar large rRNA by RNA polymerase I GO:1901837
Any process that stops, prevents or reduces the frequency, rate or extent of transcription of nuclear large rRNA transcript mediated by RNA polymerase I.
|
53 |
O75367 (/IGI)
O75367 (/IGI)
O75367 (/IGI)
O75367 (/IGI)
O75367 (/IGI)
O75367 (/IGI)
O75367 (/IGI)
O75367 (/IGI)
O75367 (/IGI)
O75367 (/IGI)
(43 more) |
Negative regulation of transcription of nucleolar large rRNA by RNA polymerase I GO:1901837
Any process that stops, prevents or reduces the frequency, rate or extent of transcription of nuclear large rRNA transcript mediated by RNA polymerase I.
|
35 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(25 more) |
Regulation of response to oxidative stress GO:1902882
Any process that modulates the frequency, rate or extent of response to oxidative stress.
|
35 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(25 more) |
Nucleosome assembly GO:0006334
The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.
|
34 |
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
(24 more) |
Regulation of lipid metabolic process GO:0019216
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.
|
34 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(24 more) |
Negative regulation of histone phosphorylation GO:0033128
Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.
|
34 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(24 more) |
Positive regulation of maintenance of mitotic sister chromatid cohesion GO:0034184
Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a mitotic cell cycle.
|
34 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(24 more) |
Regulation of gene expression, epigenetic GO:0040029
Any process that modulates the frequency, rate or extent of gene expression; the process is mitotically or meiotically heritable, or is stably self-propagated in the cytoplasm of a resting cell, and does not entail a change in DNA sequence.
|
34 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(24 more) |
Positive regulation of gene expression, epigenetic GO:0045815
Any epigenetic process that activates or increases the rate of gene expression.
|
34 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(24 more) |
Negative regulation of histone H3-K4 methylation GO:0051572
Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.
|
34 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(24 more) |
Negative regulation of histone H3-K27 methylation GO:0061086
Any process that decreases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.
|
34 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(24 more) |
Negative regulation of protein serine/threonine kinase activity GO:0071901
Any process that decreases the rate, frequency, or extent of protein serine/threonine kinase activity.
|
34 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(24 more) |
Negative regulation of cell cycle G2/M phase transition GO:1902750
Any signalling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.
|
34 |
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
O75367 (/IMP)
(24 more) |
Negative regulation of protein localization to chromosome, telomeric region GO:1904815
Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to chromosome, telomeric region.
|
34 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(24 more) |
Brain development GO:0007420
The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
|
21 |
Q4V914 (/IMP)
Q4V914 (/IMP)
Q9P0M6 (/IMP)
Q9P0M6 (/IMP)
Q9P0M6 (/IMP)
Q9P0M6 (/IMP)
Q9P0M6 (/IMP)
Q9P0M6 (/IMP)
Q9P0M6 (/IMP)
Q9P0M6 (/IMP)
(11 more) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Dosage compensation GO:0007549
Compensating for the variation in the unpaired sex chromosome:autosome chromosome ratios between sexes by activation or inactivation of genes on one or both of the sex chromosomes.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Positive regulation of keratinocyte differentiation GO:0045618
Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Negative regulation of gene expression, epigenetic GO:0045814
Any epigenetic process that stops, prevents or reduces the rate of gene expression.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Establishment of protein localization to chromatin GO:0071169
The directed movement of a protein to a part of a chromosome that is organized into chromatin.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Negative regulation of transcription of nucleolar large rRNA by RNA polymerase I GO:1901837
Any process that stops, prevents or reduces the frequency, rate or extent of transcription of nuclear large rRNA transcript mediated by RNA polymerase I.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Brain development GO:0007420
The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
|
2 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) |
Regulation of lipid metabolic process GO:0019216
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.
|
1 | Q9QZQ8 (/ISO) |
Negative regulation of histone phosphorylation GO:0033128
Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.
|
1 | Q9QZQ8 (/ISO) |
Positive regulation of maintenance of mitotic sister chromatid cohesion GO:0034184
Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a mitotic cell cycle.
|
1 | Q9QZQ8 (/ISO) |
Regulation of gene expression, epigenetic GO:0040029
Any process that modulates the frequency, rate or extent of gene expression; the process is mitotically or meiotically heritable, or is stably self-propagated in the cytoplasm of a resting cell, and does not entail a change in DNA sequence.
|
1 | Q9QZQ8 (/ISO) |
Positive regulation of gene expression, epigenetic GO:0045815
Any epigenetic process that activates or increases the rate of gene expression.
|
1 | Q9QZQ8 (/ISO) |
Negative regulation of histone H3-K4 methylation GO:0051572
Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.
|
1 | Q9QZQ8 (/ISO) |
Negative regulation of histone H3-K27 methylation GO:0061086
Any process that decreases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.
|
1 | Q9QZQ8 (/ISO) |
Negative regulation of protein serine/threonine kinase activity GO:0071901
Any process that decreases the rate, frequency, or extent of protein serine/threonine kinase activity.
|
1 | Q9QZQ8 (/ISO) |
Negative regulation of cell cycle G2/M phase transition GO:1902750
Any signalling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.
|
1 | Q9QZQ8 (/ISO) |
Regulation of response to oxidative stress GO:1902882
Any process that modulates the frequency, rate or extent of response to oxidative stress.
|
1 | Q9QZQ8 (/ISO) |
Negative regulation of response to oxidative stress GO:1902883
Any process that stops, prevents or reduces the frequency, rate or extent of response to oxidative stress.
|
1 | Q9QZQ8 (/ISO) |
Positive regulation of response to oxidative stress GO:1902884
Any process that activates or increases the frequency, rate or extent of response to oxidative stress.
|
1 | Q9QZQ8 (/ISO) |
Negative regulation of protein localization to chromosome, telomeric region GO:1904815
Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to chromosome, telomeric region.
|
1 | Q9QZQ8 (/ISO) |
There are 25 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nuclear chromosome, telomeric region GO:0000784
The terminal region of a linear nuclear chromosome that includes the telomeric DNA repeats and associated proteins.
|
53 |
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
(43 more) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
53 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(43 more) |
Barr body GO:0001740
A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery.
|
53 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(43 more) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
53 |
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
(43 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
38 |
B1WC28 (/IDA)
B1WC28 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(28 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
38 |
A0A024QZP6 (/IDA)
A0A024QZP6 (/IDA)
A0A024QZP6 (/IDA)
A0A024QZP6 (/IDA)
A0A024QZP6 (/IDA)
A0A024QZP6 (/IDA)
A0A024QZP6 (/IDA)
A0A024QZP6 (/IDA)
A0A024QZP6 (/IDA)
A0A024QZP6 (/IDA)
(28 more) |
Nuclear chromosome GO:0000228
A chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact.
|
34 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(24 more) |
Nucleosome GO:0000786
A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
|
34 |
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
O75367 (/NAS)
(24 more) |
Sex chromatin GO:0001739
Chromatin that is part of a sex chromosome.
|
34 |
O75367 (/TAS)
O75367 (/TAS)
O75367 (/TAS)
O75367 (/TAS)
O75367 (/TAS)
O75367 (/TAS)
O75367 (/TAS)
O75367 (/TAS)
O75367 (/TAS)
O75367 (/TAS)
(24 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
34 |
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
O75367 (/HDA)
(24 more) |
Pericentric heterochromatin GO:0005721
Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
34 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(24 more) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
34 |
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
O75367 (/IDA)
(24 more) |
Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
|
3 | B1WC28 (/IDA) B1WC28 (/IDA) Q02874 (/IDA) |
Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Barr body GO:0001740
A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) Q9QZQ8 (/ISO) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
2 | Q8CCK0 (/ISO) Q8CCK0 (/ISO) |
Nuclear chromosome GO:0000228
A chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact.
|
1 | Q9QZQ8 (/ISO) |
Nucleosome GO:0000786
A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
|
1 | Q02874 (/IDA) |
Nucleosome GO:0000786
A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
|
1 | Q9QZQ8 (/ISO) |
Condensed chromosome GO:0000793
A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
|
1 | Q9QZQ8 (/IDA) |
Pericentric heterochromatin GO:0005721
Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
1 | Q9QZQ8 (/ISO) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
1 | Q9QZQ8 (/ISO) |
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
|
1 | Q9QZQ8 (/TAS) |