The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"AP2/ERF domain
".
FunFam 1: Ethylene-responsive transcription factor 2
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 16 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
161 |
A0MES8 (/ISS)
F4IDA7 (/ISS)
F4IDA7 (/ISS)
F4IFX1 (/ISS)
O22174 (/ISS)
O22259 (/ISS)
O49515 (/ISS)
O65665 (/ISS)
O80337 (/ISS)
O80338 (/ISS)
(151 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
57 |
A0MES8 (/IPI)
O80339 (/IPI)
O80339 (/IPI)
O80340 (/IPI)
O80340 (/IPI)
O82132 (/IPI)
O82132 (/IPI)
O82132 (/IPI)
O82339 (/IPI)
O82503 (/IPI)
(47 more) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
48 |
O80339 (/IPI)
O80339 (/IPI)
O80340 (/IPI)
O80340 (/IPI)
O80341 (/IPI)
O80341 (/IPI)
O80917 (/IPI)
O82132 (/IPI)
O82132 (/IPI)
O82132 (/IPI)
(38 more) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
35 |
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A3FMG9 (/IDA)
O80338 (/IDA)
O80338 (/IDA)
O82132 (/IDA)
O82132 (/IDA)
(25 more) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
33 |
F4IDA7 (/TAS)
F4IDA7 (/TAS)
O49515 (/TAS)
P42736 (/TAS)
P93822 (/TAS)
P93822 (/TAS)
Q8L9K1 (/TAS)
Q8LDC8 (/TAS)
Q8VYM0 (/TAS)
Q8VZ91 (/TAS)
(23 more) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
20 |
O80917 (/IPI)
O82132 (/IPI)
O82132 (/IPI)
O82132 (/IPI)
O82133 (/IPI)
O82133 (/IPI)
Q6J9Q2 (/IPI)
Q6J9Q2 (/IPI)
Q8LBQ7 (/IPI)
Q9FJ90 (/IPI)
(10 more) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
18 |
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
(8 more) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
11 |
A0MES8 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
(1 more) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
8 | A0MES8 (/IDA) P42736 (/IDA) Q5W6R4 (/IDA) Q5W6R4 (/IDA) Q5W6R4 (/IDA) Q8H1E4 (/IDA) Q8L9K1 (/IDA) Q8LDC8 (/IDA) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
6 | P42736 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
5 | Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
|
3 | Q076D8 (/IDA) Q9FKG2 (/IDA) Q9FKG2 (/IDA) |
DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to repress or decrease transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
2 | Q7XAV5 (/IDA) Q7XAV5 (/IDA) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
2 | Q9SUQ2 (/IPI) Q9SUQ2 (/IPI) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
1 | P42736 (/TAS) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
1 | Q076D8 (/ISM) |
There are 148 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ethylene-activated signaling pathway GO:0009873
A series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription.
|
35 |
F4IDA7 (/TAS)
F4IDA7 (/TAS)
O49515 (/TAS)
O80338 (/TAS)
O80338 (/TAS)
O80341 (/TAS)
O80341 (/TAS)
P42736 (/TAS)
P93822 (/TAS)
P93822 (/TAS)
(25 more) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
29 |
A0MES8 (/IDA)
O80338 (/IDA)
O80338 (/IDA)
O80917 (/IDA)
P42736 (/IDA)
P93835 (/IDA)
P93835 (/IDA)
P93835 (/IDA)
P93835 (/IDA)
Q076D8 (/IDA)
(19 more) |
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
|
24 |
O80341 (/IEP)
O80341 (/IEP)
P93835 (/IEP)
P93835 (/IEP)
P93835 (/IEP)
P93835 (/IEP)
Q076D8 (/IEP)
Q5YLQ7 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
(14 more) |
Response to water deprivation GO:0009414
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
|
24 |
A0MES8 (/IMP)
O82132 (/IMP)
O82132 (/IMP)
O82132 (/IMP)
Q5W6R4 (/IMP)
Q5W6R4 (/IMP)
Q5W6R4 (/IMP)
Q7F4G5 (/IMP)
Q7F4G5 (/IMP)
Q7F4G5 (/IMP)
(14 more) |
Response to chitin GO:0010200
A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
|
22 |
F4IFX1 (/IEP)
O49515 (/IEP)
O80337 (/IEP)
O80338 (/IEP)
O80338 (/IEP)
O80340 (/IEP)
O80340 (/IEP)
O80341 (/IEP)
O80341 (/IEP)
Q8L9K1 (/IEP)
(12 more) |
Response to ethylene GO:0009723
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.
|
18 |
A2WVZ6 (/IEP)
A2WVZ6 (/IEP)
A2WVZ6 (/IEP)
A2WVZ6 (/IEP)
A2WVZ6 (/IEP)
F4IDA7 (/IEP)
F4IDA7 (/IEP)
P42736 (/IEP)
Q5YLQ7 (/IEP)
Q7F4G5 (/IEP)
(8 more) |
Response to water deprivation GO:0009414
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
|
17 |
O80917 (/IEP)
Q076D8 (/IEP)
Q5YLQ7 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7G1L2 (/IEP)
Q7XAV5 (/IEP)
(7 more) |
Response to salt stress GO:0009651
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
|
12 |
O80917 (/IMP)
Q5W6R4 (/IMP)
Q5W6R4 (/IMP)
Q5W6R4 (/IMP)
Q7F4G5 (/IMP)
Q7F4G5 (/IMP)
Q7F4G5 (/IMP)
Q7F4G5 (/IMP)
Q7F4G5 (/IMP)
Q7G1L2 (/IMP)
(2 more) |
Response to abscisic acid GO:0009737
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
|
12 |
Q076D8 (/IEP)
Q5YLQ7 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7G1L2 (/IEP)
Q9FGF8 (/IEP)
Q9FGF8 (/IEP)
(2 more) |
Glucosinolate metabolic process GO:0019760
The chemical reactions and pathways involving glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae. They are metabolized to a variety of toxic products which are most likely the cause of hepatocytic necrosis in animals and humans.
|
12 |
Q38Q39 (/IMP)
Q9FE67 (/IMP)
Q9FJ90 (/IMP)
Q9FJ90 (/IMP)
Q9FJ93 (/IMP)
Q9FJ93 (/IMP)
Q9FKG2 (/IMP)
Q9FKG2 (/IMP)
Q9LN86 (/IMP)
Q9LN86 (/IMP)
(2 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
12 |
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
A2WVZ6 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
Q7F4G5 (/IDA)
(2 more) |
Response to jasmonic acid GO:0009753
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
|
11 |
P42736 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7F4G5 (/IEP)
Q7G1L2 (/IEP)
Q9LND1 (/IEP)
Q9LND1 (/IEP)
Q9LYU3 (/IEP)
(1 more) |
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
|
10 | Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q8LC30 (/IMP) Q8LC30 (/IMP) Q9M0L0 (/IMP) Q9M0L0 (/IMP) Q9M0L0 (/IMP) |
Cold acclimation GO:0009631
Any process that increases freezing tolerance of an organism in response to low, nonfreezing temperatures.
|
10 | P93835 (/IMP) P93835 (/IMP) P93835 (/IMP) P93835 (/IMP) Q9M0L0 (/IMP) Q9M0L0 (/IMP) Q9M0L0 (/IMP) Q9SYS6 (/IMP) Q9SYS6 (/IMP) Q9SYS6 (/IMP) |
Phloem or xylem histogenesis GO:0010087
The process whose specific outcome is the progression of phloem and/or xylem over time, from formation to the mature structure. An example of this process is found in Arabidopsis thaliana.
|
10 | O80337 (/IEP) O80338 (/IEP) O80338 (/IEP) Q8VZ91 (/IEP) Q9C5I3 (/IEP) Q9C5I3 (/IEP) Q9FKG1 (/IEP) Q9S7L5 (/IEP) Q9S7L5 (/IEP) Q9SZ06 (/IEP) |
Cell division GO:0051301
The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.
|
10 | O80337 (/IEP) O80338 (/IEP) O80338 (/IEP) Q8VZ91 (/IEP) Q9C5I3 (/IEP) Q9C5I3 (/IEP) Q9FKG1 (/IEP) Q9S7L5 (/IEP) Q9S7L5 (/IEP) Q9SZ06 (/IEP) |
Response to wounding GO:0009611
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
|
9 | Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7G1L2 (/IEP) Q8H1E4 (/IEP) Q9S7L5 (/IEP) Q9S7L5 (/IEP) |
Response to salt stress GO:0009651
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
|
9 | Q076D8 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7G1L2 (/IEP) Q8H1E4 (/IEP) Q9SKT1 (/IEP) |
Cotyledon development GO:0048825
The process whose specific outcome is the progression of the cotyledon over time, from its formation to the mature structure. The cotyledon is the modified leaf (seed leaf), found as part of the embryo in plant seeds. It is involved in either storage or absorption of food reserves. Dicotyledonous seeds contain two cotyledons, while monocotyledonous seeds contain only one. The cotyledons may appear above ground and show photosynthetic activity in the seedling.
|
9 | O82339 (/IMP) O82503 (/IMP) Q9FK12 (/IMP) Q9FYK5 (/IMP) Q9M374 (/IMP) Q9M374 (/IMP) Q9SAD4 (/IMP) Q9SUQ2 (/IMP) Q9SUQ2 (/IMP) |
Defense response to fungus GO:0050832
Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
|
9 | A3FMG9 (/IEP) Q9FGF8 (/IEP) Q9FGF8 (/IEP) Q9FH54 (/IEP) Q9FH54 (/IEP) Q9FJ90 (/IEP) Q9FJ90 (/IEP) Q9SJR0 (/IEP) Q9SZ06 (/IEP) |
Response to heat GO:0009408
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
|
8 | O82132 (/IMP) O82132 (/IMP) O82132 (/IMP) Q5W6R4 (/IMP) Q5W6R4 (/IMP) Q5W6R4 (/IMP) Q9LN86 (/IMP) Q9LN86 (/IMP) |
Response to salicylic acid GO:0009751
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
|
8 | Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7G1L2 (/IEP) Q9LYU3 (/IEP) Q9LYU3 (/IEP) |
Heat acclimation GO:0010286
Any process that increases heat tolerance of an organism in response to high temperatures.
|
8 | O82132 (/IEP) O82132 (/IEP) O82132 (/IEP) O82133 (/IEP) O82133 (/IEP) Q8LFR2 (/IEP) Q8LFR2 (/IEP) Q9SIZ0 (/IEP) |
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
|
7 | P42736 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q9SAD4 (/IEP) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
7 | O80340 (/IMP) O80340 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Response to auxin GO:0009733
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
|
6 | Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q9FYK5 (/IEP) |
Response to abscisic acid GO:0009737
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
|
6 | O80340 (/IMP) O80340 (/IMP) Q8LFR2 (/IMP) Q8LFR2 (/IMP) Q9LDE4 (/IMP) Q9LDE4 (/IMP) |
Leaf development GO:0048366
The process whose specific outcome is the progression of the leaf over time, from its formation to the mature structure.
|
6 | O82339 (/IMP) O82503 (/IMP) Q9FK12 (/IMP) Q9M374 (/IMP) Q9M374 (/IMP) Q9SUE3 (/IMP) |
Response to osmotic stress GO:0006970
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
|
5 | Q7G1L2 (/IEP) Q8H1E4 (/IEP) Q9FGF8 (/IEP) Q9FGF8 (/IEP) Q9LM15 (/IEP) |
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Response to water deprivation GO:0009414
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Response to insect GO:0009625
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.
|
5 | Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) |
Response to salt stress GO:0009651
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Lateral root formation GO:0010311
The process that gives rise to a lateral root. This process pertains to the initial formation of a structure from unspecified parts. A lateral root primordium represents an organized group of cells derived from the root pericycle that will differentiate into a new root, as opposed to the initiation of the main root from the embryo proper.
|
5 | Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Lateral root formation GO:0010311
The process that gives rise to a lateral root. This process pertains to the initial formation of a structure from unspecified parts. A lateral root primordium represents an organized group of cells derived from the root pericycle that will differentiate into a new root, as opposed to the initiation of the main root from the embryo proper.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Regulation of salicylic acid metabolic process GO:0010337
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving salicylic acid.
|
5 | Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Regulation of salicylic acid metabolic process GO:0010337
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving salicylic acid.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Regulation of ethylene biosynthetic process GO:0010364
Any process that modulates the frequency, rate, or extent of an ethylene biosynthetic process.
|
5 | Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) |
Regulation of ethylene biosynthetic process GO:0010364
Any process that modulates the frequency, rate, or extent of an ethylene biosynthetic process.
|
5 | Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Regulation of ethylene biosynthetic process GO:0010364
Any process that modulates the frequency, rate, or extent of an ethylene biosynthetic process.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Floral meristem determinacy GO:0010582
The process in which a floral meristem becomes determinate (i.e. ceases to produce lateral organs and may or may not terminally differentiate).
|
5 | Q6J9Q2 (/IMP) Q6J9Q2 (/IMP) Q8H3Q1 (/IMP) Q8H3Q1 (/IMP) Q8H3Q1 (/IMP) |
Regulation of hydrogen peroxide biosynthetic process GO:0010728
Any process that modulates the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.
|
5 | Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Regulation of hydrogen peroxide biosynthetic process GO:0010728
Any process that modulates the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Response to herbivore GO:0080027
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.
|
5 | Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) Q7F4G5 (/IEP) |
Regulation of seed growth GO:0080113
Any process that modulates the frequency, rate or extent of growth of the seed of an plant.
|
5 | Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Regulation of jasmonic acid biosynthetic process GO:0080141
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of jasmonic acid.
|
5 | Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Regulation of jasmonic acid biosynthetic process GO:0080141
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of jasmonic acid.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Regulation of defense response to insect GO:2000068
Any process that modulates the frequency, rate or extent of defense response to insect.
|
5 | Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) Q7F4G5 (/IMP) |
Regulation of defense response to insect GO:2000068
Any process that modulates the frequency, rate or extent of defense response to insect.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Cold acclimation GO:0009631
Any process that increases freezing tolerance of an organism in response to low, nonfreezing temperatures.
|
4 | P93835 (/IEP) P93835 (/IEP) P93835 (/IEP) P93835 (/IEP) |
Induced systemic resistance, jasmonic acid mediated signaling pathway GO:0009864
The series of molecular signals mediated by jasmonic acid involved in induced systemic resistance.
|
4 | O80338 (/IMP) O80338 (/IMP) O80340 (/IMP) O80340 (/IMP) |
Negative regulation of ethylene-activated signaling pathway GO:0010105
Any process that stops or prevents ethylene (ethene) signal transduction.
|
4 | O80339 (/TAS) O80339 (/TAS) O80340 (/TAS) O80340 (/TAS) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
4 | O80338 (/IMP) O80338 (/IMP) Q70II3 (/IMP) Q7G1L2 (/IMP) |
Regulation of timing of transition from vegetative to reproductive phase GO:0048510
The process controlling the point in time during development when a vegetative meristem will change its identity to become an inflorescence or floral meristem, and/or the rate at which the change occurs.
|
4 | Q70II3 (/IMP) Q9LN86 (/IMP) Q9LN86 (/IMP) Q9SGJ6 (/IMP) |
Response to hypoxia GO:0001666
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
3 | Q9LUM4 (/IMP) Q9SSA8 (/IMP) Q9SSA8 (/IMP) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | A3FMG9 (/IDA) F4IDA7 (/IDA) F4IDA7 (/IDA) |
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
|
3 | Q9M0L0 (/IDA) Q9M0L0 (/IDA) Q9M0L0 (/IDA) |
Response to water deprivation GO:0009414
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
|
3 | Q9M0L0 (/IDA) Q9M0L0 (/IDA) Q9M0L0 (/IDA) |
Embryo development ending in seed dormancy GO:0009793
The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
|
3 | O82339 (/IGI) Q9M374 (/IGI) Q9M374 (/IGI) |
Ethylene-activated signaling pathway GO:0009873
A series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription.
|
3 | F4IDA7 (/IMP) F4IDA7 (/IMP) Q8H1E4 (/IMP) |
Response to UV-B GO:0010224
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 280 to 315 nm.
|
3 | O82132 (/IEP) O82132 (/IEP) O82132 (/IEP) |
Response to UV-B GO:0010224
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 280 to 315 nm.
|
3 | O82132 (/IGI) O82132 (/IGI) O82132 (/IGI) |
Regulation of gibberellin biosynthetic process GO:0010371
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.
|
3 | Q9LN86 (/IMP) Q9LN86 (/IMP) Q9SGJ6 (/IMP) |
Response to anoxia GO:0034059
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating a decline in oxygen levels to trace amounts, <0.1%.
|
3 | F4IDA7 (/IGI) F4IDA7 (/IGI) O22259 (/IGI) |
Response to hydrogen peroxide GO:0042542
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
|
3 | O82132 (/IEP) O82132 (/IEP) O82132 (/IEP) |
Response to salt GO:1902074
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salt stimulus.
|
3 | Q5YLQ7 (/IEP) Q9FGF8 (/IEP) Q9FGF8 (/IEP) |
Regulation of secondary shoot formation GO:2000032
Any process that modulates the frequency, rate or extent of secondary shoot formation.
|
3 | Q8H3Q1 (/IMP) Q8H3Q1 (/IMP) Q8H3Q1 (/IMP) |
Regulation of root development GO:2000280
Any process that modulates the frequency, rate or extent of root development.
|
3 | O22259 (/IMP) Q9SSA8 (/IMP) Q9SSA8 (/IMP) |
Response to hypoxia GO:0001666
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
2 | F4IDA7 (/IEP) F4IDA7 (/IEP) |
Defense response to insect GO:0002213
A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism.
|
2 | Q9S7L5 (/IEP) Q9S7L5 (/IEP) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
2 | Q9LDE4 (/TAS) Q9LDE4 (/TAS) |
Pollen development GO:0009555
The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.
|
2 | O82133 (/IMP) O82133 (/IMP) |
Response to bacterium GO:0009617
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.
|
2 | Q9SNE1 (/IEP) Q9SNE1 (/IEP) |
Response to nematode GO:0009624
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.
|
2 | O80337 (/IEP) Q8VZ91 (/IEP) |
Response to ethylene GO:0009723
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.
|
2 | O80340 (/IMP) O80340 (/IMP) |
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
|
2 | Q9M644 (/IMP) Q9M644 (/IMP) |
Response to glucose GO:0009749
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.
|
2 | Q9FGF8 (/IEP) Q9FGF8 (/IEP) |
Negative regulation of abscisic acid-activated signaling pathway GO:0009788
Any process that stops, prevents, or reduces the frequency, rate or extent of abscisic acid (ABA) signaling.
|
2 | Q9FGF8 (/IMP) Q9FGF8 (/IMP) |
Positive regulation of abscisic acid-activated signaling pathway GO:0009789
Any process that activates or increases the frequency, rate or extent of abscisic acid (ABA) signaling.
|
2 | Q9LSX0 (/IMP) Q9LSX0 (/IMP) |
Plant-type secondary cell wall biogenesis GO:0009834
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall after cell expansion is complete. An example of this is found in Arabidopsis thaliana.
|
2 | Q9ZQP3 (/TAS) Q9ZQP3 (/TAS) |
Jasmonic acid and ethylene-dependent systemic resistance GO:0009861
The jasmonic acid and ethylene (ethene) dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.
|
2 | Q9LND1 (/IMP) Q9LND1 (/IMP) |
Embryonic pattern specification GO:0009880
The process that results in the patterns of cell differentiation that will arise in an embryo.
|
2 | Q9FYK5 (/IMP) Q9SAD4 (/IMP) |
Flower development GO:0009908
The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem.
|
2 | Q6J9Q2 (/IMP) Q6J9Q2 (/IMP) |
Positive regulation of seed germination GO:0010030
Any process that activates or increase the rate of seed germination.
|
2 | Q9M644 (/IMP) Q9M644 (/IMP) |
Lateral root morphogenesis GO:0010102
The process in which the anatomical structures of a lateral root are generated and organized. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.
|
2 | Q6J9Q2 (/IMP) Q6J9Q2 (/IMP) |
Cutin biosynthetic process GO:0010143
The chemical reactions and pathways resulting in the formation of cutin, a waxy substance, which combined with cellulose forms a substance nearly impervious to water and constituting the cuticle in plants.
|
2 | Q9XI33 (/IMP) Q9XI33 (/IMP) |
Wax metabolic process GO:0010166
The chemical reactions and pathways involving wax, a compound containing C16 and C18 fatty acids.
|
2 | Q9XI33 (/IMP) Q9XI33 (/IMP) |
Positive regulation of cellular defense response GO:0010186
Any process that activates or increases the frequency, rate or extent of cellular defense response.
|
2 | Q9LSX0 (/IMP) Q9LSX0 (/IMP) |
Bract development GO:0010432
The process whose specific outcome is the progression of the bract over time, from its formation to the mature structure. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.
|
2 | Q6J9Q2 (/IGI) Q6J9Q2 (/IGI) |
Bract development GO:0010432
The process whose specific outcome is the progression of the bract over time, from its formation to the mature structure. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.
|
2 | Q6J9Q2 (/IMP) Q6J9Q2 (/IMP) |
Floral meristem growth GO:0010451
The increase in size or mass of a floral meristem, a population of undifferentiated cells in a plant that gives rise to a flower.
|
2 | Q6J9Q2 (/IMP) Q6J9Q2 (/IMP) |
Floral meristem determinacy GO:0010582
The process in which a floral meristem becomes determinate (i.e. ceases to produce lateral organs and may or may not terminally differentiate).
|
2 | Q6J9Q2 (/IGI) Q6J9Q2 (/IGI) |
Regulation of cell death GO:0010941
Any process that modulates the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.
|
2 | Q9SNE1 (/IMP) Q9SNE1 (/IMP) |
Cellular response to heat GO:0034605
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
|
2 | O80917 (/IEP) Q7G1L2 (/IEP) |
Hyperosmotic salinity response GO:0042538
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
|
2 | Q7XAV5 (/IEP) Q7XAV5 (/IEP) |
Defense response to bacterium GO:0042742
Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
|
2 | Q9SNE1 (/IMP) Q9SNE1 (/IMP) |
Root development GO:0048364
The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo.
|
2 | Q9SUQ2 (/IEP) Q9SUQ2 (/IEP) |
Response to freezing GO:0050826
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a freezing stimulus, temperatures below 0 degrees Celsius.
|
2 | Q9LN86 (/IMP) Q9LN86 (/IMP) |
Regulation of unidimensional cell growth GO:0051510
Any process that modulates the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one
|
2 | Q9LN86 (/IMP) Q9LN86 (/IMP) |
Detection of hypoxia GO:0070483
The series of events in which a stimulus indicating lowered oxygen tension is received by a cell and converted into a molecular signal. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
2 | Q9SSA8 (/IEP) Q9SSA8 (/IEP) |
Cellular response to ethylene stimulus GO:0071369
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.
|
2 | F4IDA7 (/IMP) F4IDA7 (/IMP) |
Cellular response to hypoxia GO:0071456
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
2 | F4IDA7 (/IEP) F4IDA7 (/IEP) |
Cellular response to freezing GO:0071497
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a freezing stimulus, temperatures below 0 degrees Celsius.
|
2 | Q9LYU3 (/IEP) Q9LYU3 (/IEP) |
Stomatal closure GO:0090332
The process of closing of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.
|
2 | Q9LSX0 (/IMP) Q9LSX0 (/IMP) |
Negative regulation of lateral root development GO:1901332
Any process that stops, prevents or reduces the frequency, rate or extent of lateral root development.
|
2 | Q6J9Q2 (/IGI) Q6J9Q2 (/IGI) |
Negative regulation of wax biosynthetic process GO:1904277
Any process that stops, prevents or reduces the frequency, rate or extent of wax biosynthetic process.
|
2 | Q9FKG2 (/IMP) Q9FKG2 (/IMP) |
Response to reactive oxygen species GO:0000302
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.
|
1 | Q8VZ91 (/IEP) |
Starch catabolic process GO:0005983
The chemical reactions and pathways resulting in the breakdown of starch, the most important reserve polysaccharide in plants.
|
1 | A0MES8 (/NAS) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q9SKW5 (/IEP) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q9FYK5 (/IMP) |
Defense response GO:0006952
Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
|
1 | Q8LDC8 (/IMP) |
Response to osmotic stress GO:0006970
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
|
1 | A0MES8 (/IMP) |
Cell death GO:0008219
Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538).
|
1 | P42736 (/IMP) |
Response to water GO:0009415
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.
|
1 | Q9SKW5 (/IMP) |
Response to light stimulus GO:0009416
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
|
1 | Q8H1E4 (/IEP) |
Response to fungus GO:0009620
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.
|
1 | Q5MFV3 (/IEP) |
Response to high light intensity GO:0009644
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.
|
1 | Q8VZ91 (/IMP) |
Chloroplast organization GO:0009658
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
|
1 | Q7G1L2 (/IMP) |
Cytokinin-activated signaling pathway GO:0009736
A series of molecular signals generated by the binding of a cytokinin to a receptor, and ending with regulation of a downstream cellular process, e.g. transcription.
|
1 | Q8H1E4 (/IMP) |
Abscisic acid-activated signaling pathway GO:0009738
A series of molecular signals generated by the binding of the plant hormone abscisic acid (ABA) to a receptor, and ending with modulation of a cellular process, e.g. transcription.
|
1 | A0MES8 (/IMP) |
Response to sucrose GO:0009744
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.
|
1 | A0MES8 (/IEP) |
Response to glucose GO:0009749
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.
|
1 | A0MES8 (/IMP) |
Jasmonic acid mediated signaling pathway GO:0009867
A series of molecular signals mediated by jasmonic acid.
|
1 | Q8LDC8 (/TAS) |
Ethylene-activated signaling pathway GO:0009873
A series of molecular signals generated by the reception of ethylene (ethene, C2H4) by a receptor and ending with modulation of a cellular process, e.g. transcription.
|
1 | Q8LDC8 (/IGI) |
Regulation of stomatal movement GO:0010119
Any process that modulates the frequency, rate or extent of stomatal movement.
|
1 | A0MES8 (/IGI) |
Sugar mediated signaling pathway GO:0010182
The process in which a change in the level of a mono- or disaccharide such as glucose, fructose or sucrose triggers the expression of genes controlling metabolic and developmental processes.
|
1 | A0MES8 (/TAS) |
Heat acclimation GO:0010286
Any process that increases heat tolerance of an organism in response to high temperatures.
|
1 | P42736 (/IMP) |
Response to trehalose GO:0010353
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose stimulus.
|
1 | A0MES8 (/IMP) |
Root meristem growth GO:0010449
The increase in size or mass of a root meristem, a population of undifferentiated cells in a plant root which maintains a continuous balance between the production of stem cells and the incorporation of their derivatives into the growth of the root.
|
1 | A0MES8 (/IMP) |
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
1 | Q9LUM4 (/IEP) |
Regulation of triglyceride catabolic process GO:0010896
Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of triglyceride.
|
1 | A0MES8 (/IMP) |
Regulation of auxin mediated signaling pathway GO:0010928
Any process that modulates the rate, frequency or extent of auxin mediated signaling pathway. Auxin mediated signaling pathway is the series of molecular signals generated in response to detection of auxin.
|
1 | Q9SZ06 (/IEP) |
Mitochondria-nucleus signaling pathway GO:0031930
A series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.
|
1 | A0MES8 (/IDA) |
Mitochondria-nucleus signaling pathway GO:0031930
A series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.
|
1 | A0MES8 (/IMP) |
Regulation of protein localization GO:0032880
Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location.
|
1 | A0MES8 (/IDA) |
Regulation of cell differentiation GO:0045595
Any process that modulates the frequency, rate or extent of cell differentiation, the process in which relatively unspecialized cells acquire specialized structural and functional features.
|
1 | Q8H1E4 (/IMP) |
Seed development GO:0048316
The process whose specific outcome is the progression of the seed over time, from its formation to the mature structure. A seed is a propagating organ formed in the sexual reproductive cycle of gymnosperms and angiosperms, consisting of a protective coat enclosing an embryo and food reserves.
|
1 | A0MES8 (/IMP) |
Lateral root development GO:0048527
The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.
|
1 | A0MES8 (/IMP) |
Defense response to fungus GO:0050832
Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
|
1 | Q9FKG1 (/IMP) |
Response to other organism GO:0051707
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.
|
1 | P42736 (/IEP) |
Regulation of cell cycle GO:0051726
Any process that modulates the rate or extent of progression through the cell cycle.
|
1 | Q9FYK5 (/IMP) |
Cellular response to salt stress GO:0071472
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
|
1 | Q8H1E4 (/IEP) |
Regulation of tryptophan metabolic process GO:0090357
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.
|
1 | Q9SZ06 (/IEP) |
Specification of plant organ axis polarity GO:0090708
The process in which the polarity of a plant organ axis is specified.
|
1 | Q9SAD4 (/IMP) |
Positive regulation of cellular response to heat GO:1900036
Any process that activates or increases the frequency, rate or extent of cellular response to heat.
|
1 | Q9SKT1 (/IMP) |
Plant organ morphogenesis GO:1905392
The developmental process by which a plant organ is generated and organized.
|
1 | Q9SAD4 (/IMP) |
Regulation of response to water deprivation GO:2000070
Any process that modulates the frequency, rate or extent of response to water deprivation.
|
1 | Q9SKT1 (/IEP) |
Regulation of L-ascorbic acid biosynthetic process GO:2000082
Any process that modulates the frequency, rate or extent of L-ascorbic acid biosynthetic process.
|
1 | A0MES8 (/IDA) |
There are 11 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
50 |
A0MES8 (/IDA)
C7J2Z1 (/IDA)
F4IDA7 (/IDA)
F4IDA7 (/IDA)
F4IFX1 (/IDA)
O22259 (/IDA)
O80917 (/IDA)
O82132 (/IDA)
O82132 (/IDA)
O82132 (/IDA)
(40 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
9 | O80338 (/TAS) O80338 (/TAS) O80340 (/TAS) O80340 (/TAS) O80341 (/TAS) O80341 (/TAS) P42736 (/TAS) Q8LDC8 (/TAS) Q9LTC6 (/TAS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
5 | A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) A2WVZ6 (/ISS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
4 | P42736 (/IDA) Q9M374 (/IDA) Q9M374 (/IDA) Q9SKT1 (/IDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
3 | P42736 (/IDA) Q9SSA8 (/IDA) Q9SSA8 (/IDA) |
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
|
2 | O80340 (/IDA) O80340 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | A3FMG9 (/RCA) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
1 | F4IFX1 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | Q9SAD4 (/IDA) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
1 | Q8VYM0 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
1 | Q9FE67 (/IDA) |