The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 826: Translation initiation factor eIF4B
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
5 | P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) |
|
Single-stranded RNA binding GO:0003727
Interacting selectively and non-covalently with single-stranded RNA.
|
5 | P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) |
|
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
5 | P34167 (/HDA) P34167 (/HDA) P34167 (/HDA) P34167 (/HDA) P34167 (/HDA) |
|
RNA strand annealing activity GO:0033592
Facilitates the base-pairing of complementary single-stranded RNA.
|
5 | P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) |
|
RNA strand-exchange activity GO:0034057
Facilitates the displacement of one strand of an RNA-RNA duplex and its replacement with a different strand of higher complementarity.
|
5 | P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) |
|
Ribosomal small subunit binding GO:0043024
Interacting selectively and non-covalently with any part of the small ribosomal subunit.
|
5 | P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) |
There are 7 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Formation of translation preinitiation complex GO:0001731
The joining of the small ribosomal subunit, ternary complex, and mRNA.
|
5 | P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) |
|
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
|
5 | P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) |
|
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
|
5 | P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) |
|
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
|
5 | P34167 (/IGI) P34167 (/IGI) P34167 (/IGI) P34167 (/IGI) P34167 (/IGI) |
|
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
|
5 | P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) |
|
Eukaryotic translation initiation factor 4F complex assembly GO:0097010
The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 4F complex.
|
5 | P34167 (/IGI) P34167 (/IGI) P34167 (/IGI) P34167 (/IGI) P34167 (/IGI) |
|
Eukaryotic translation initiation factor 4F complex assembly GO:0097010
The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 4F complex.
|
5 | P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) P34167 (/IMP) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
|
5 | P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) P34167 (/IDA) |
