The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 53: Serine/arginine-rich splicing factor 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 18 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
140 |
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
(130 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
108 |
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
(98 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
57 |
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
(47 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
49 |
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
(39 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
46 |
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
(36 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
46 |
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
(36 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
Protein kinase B binding GO:0043422
Interacting selectively and non-covalently with protein kinase B, an intracellular kinase that is important in regulating glucose metabolism.
|
46 |
D4A9L2 (/IPI)
D4A9L2 (/IPI)
D4A9L2 (/IPI)
D4A9L2 (/IPI)
D4A9L2 (/IPI)
D4A9L2 (/IPI)
D4A9L2 (/IPI)
D4A9L2 (/IPI)
D4A9L2 (/IPI)
D4A9L2 (/IPI)
(36 more) |
Protein kinase B binding GO:0043422
Interacting selectively and non-covalently with protein kinase B, an intracellular kinase that is important in regulating glucose metabolism.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
DNA topoisomerase binding GO:0044547
Interacting selectively and non-covalently with a DNA topoisomerase.
|
46 |
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
Q07955 (/IPI)
(36 more) |
DNA topoisomerase binding GO:0044547
Interacting selectively and non-covalently with a DNA topoisomerase.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
RS domain binding GO:0050733
Interacting selectively and non-covalently with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing.
|
46 |
Q6PDM2 (/IPI)
Q6PDM2 (/IPI)
Q6PDM2 (/IPI)
Q6PDM2 (/IPI)
Q6PDM2 (/IPI)
Q6PDM2 (/IPI)
Q6PDM2 (/IPI)
Q6PDM2 (/IPI)
Q6PDM2 (/IPI)
Q6PDM2 (/IPI)
(36 more) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
11 |
Q13242 (/IPI)
Q13242 (/IPI)
Q13242 (/IPI)
Q13242 (/IPI)
Q13242 (/IPI)
Q13242 (/IPI)
Q13242 (/IPI)
Q13242 (/IPI)
Q13242 (/IPI)
Q13242 (/IPI)
(1 more) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
3 | Q9V3W7 (/IDA) Q9V3W7 (/IDA) Q9V3W7 (/IDA) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
3 | Q9V3W7 (/ISS) Q9V3W7 (/ISS) Q9V3W7 (/ISS) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
1 | Q9NEW6 (/NAS) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
1 | Q9D0B0 (/ISO) |
There are 35 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
MRNA 5'-splice site recognition GO:0000395
Recognition of the intron 5'-splice site by components of the assembling spliceosome.
|
139 |
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
(129 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
57 |
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
(47 more) |
MRNA splice site selection GO:0006376
Selection of a splice site by components of the assembling spliceosome.
|
57 |
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
(47 more) |
MRNA processing GO:0006397
Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
|
57 |
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
(47 more) |
RNA export from nucleus GO:0006405
The directed movement of RNA from the nucleus to the cytoplasm.
|
57 |
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
(47 more) |
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
|
57 |
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
(47 more) |
MRNA 3'-end processing GO:0031124
Any process involved in forming the mature 3' end of an mRNA molecule.
|
57 |
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
(47 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
49 |
Q07955 (/IC)
Q07955 (/IC)
Q07955 (/IC)
Q07955 (/IC)
Q07955 (/IC)
Q07955 (/IC)
Q07955 (/IC)
Q07955 (/IC)
Q07955 (/IC)
Q07955 (/IC)
(39 more) |
Alternative mRNA splicing, via spliceosome GO:0000380
The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition.
|
46 |
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
(36 more) |
Alternative mRNA splicing, via spliceosome GO:0000380
The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition.
|
46 |
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
(36 more) |
Alternative mRNA splicing, via spliceosome GO:0000380
The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
MRNA 5'-splice site recognition GO:0000395
Recognition of the intron 5'-splice site by components of the assembling spliceosome.
|
46 |
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
(36 more) |
MRNA 5'-splice site recognition GO:0000395
Recognition of the intron 5'-splice site by components of the assembling spliceosome.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
In utero embryonic development GO:0001701
The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.
|
46 |
Q6PDM2 (/IMP)
Q6PDM2 (/IMP)
Q6PDM2 (/IMP)
Q6PDM2 (/IMP)
Q6PDM2 (/IMP)
Q6PDM2 (/IMP)
Q6PDM2 (/IMP)
Q6PDM2 (/IMP)
Q6PDM2 (/IMP)
Q6PDM2 (/IMP)
(36 more) |
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
|
46 |
Q6PDM2 (/IDA)
Q6PDM2 (/IDA)
Q6PDM2 (/IDA)
Q6PDM2 (/IDA)
Q6PDM2 (/IDA)
Q6PDM2 (/IDA)
Q6PDM2 (/IDA)
Q6PDM2 (/IDA)
Q6PDM2 (/IDA)
Q6PDM2 (/IDA)
(36 more) |
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
|
46 |
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
(36 more) |
Positive regulation of RNA splicing GO:0033120
Any process that activates or increases the frequency, rate or extent of RNA splicing.
|
46 |
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
D4A9L2 (/IMP)
(36 more) |
Positive regulation of RNA splicing GO:0033120
Any process that activates or increases the frequency, rate or extent of RNA splicing.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
Oligodendrocyte differentiation GO:0048709
The process in which a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system.
|
46 |
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
(36 more) |
Cardiac muscle contraction GO:0060048
Muscle contraction of cardiac muscle tissue.
|
46 |
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
Q6PDM2 (/IGI)
(36 more) |
Liver regeneration GO:0097421
The regrowth of lost or destroyed liver.
|
46 |
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
D4A9L2 (/IEP)
(36 more) |
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
11 |
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
(1 more) |
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
3 | Q9V3W7 (/IMP) Q9V3W7 (/IMP) Q9V3W7 (/IMP) |
Regulation of transcriptional start site selection at RNA polymerase II promoter GO:0001178
Any process that modulates the rate, frequency or extent of a process involved in the selection of the specific location within the template strand of an RNA polymerase II promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.
|
3 | Q9V3W7 (/IMP) Q9V3W7 (/IMP) Q9V3W7 (/IMP) |
RNA export from nucleus GO:0006405
The directed movement of RNA from the nucleus to the cytoplasm.
|
3 | Q9V3W7 (/IMP) Q9V3W7 (/IMP) Q9V3W7 (/IMP) |
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
3 | Q9V3W7 (/IMP) Q9V3W7 (/IMP) Q9V3W7 (/IMP) |
Regulation of mRNA 3'-end processing GO:0031440
Any process that modulates the frequency, rate or extent of mRNA 3'-end processing, any process involved in forming the mature 3' end of an mRNA molecule.
|
3 | Q9V3W7 (/IMP) Q9V3W7 (/IMP) Q9V3W7 (/IMP) |
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
2 | Q5PPI1 (/ISS) Q9D0B0 (/ISS) |
MRNA splice site selection GO:0006376
Selection of a splice site by components of the assembling spliceosome.
|
1 | Q9NEW6 (/ISS) |
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
|
1 | Q9NEW6 (/NAS) |
Response to toxic substance GO:0009636
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.
|
1 | Q5PPI1 (/IEP) |
Embryo development ending in birth or egg hatching GO:0009792
The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell.
|
1 | Q9NEW6 (/IGI) |
Embryo development ending in birth or egg hatching GO:0009792
The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell.
|
1 | Q9NEW6 (/IMP) |
Response to alkaloid GO:0043279
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active.
|
1 | Q5PPI1 (/IEP) |
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
1 | Q9D0B0 (/ISO) |
There are 17 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
141 |
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
(131 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
139 |
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
Q0VCY7 (/ISS)
(129 more) |
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
92 |
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
(82 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
57 |
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
(47 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
57 |
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
Q07955 (/TAS)
(47 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
47 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(37 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
46 |
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
Q07955 (/HDA)
(36 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
46 |
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
D4A9L2 (/IDA)
(36 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
46 |
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
Q07955 (/IDA)
(36 more) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
46 |
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
Q6PDM2 (/ISO)
(36 more) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
11 |
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
Q13242 (/IDA)
(1 more) |
Precatalytic spliceosome GO:0071011
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
|
3 | Q9V3W7 (/HDA) Q9V3W7 (/HDA) Q9V3W7 (/HDA) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
3 | Q9V3W7 (/HDA) Q9V3W7 (/HDA) Q9V3W7 (/HDA) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
1 | Q9D0B0 (/ISO) |