The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 3: Polyadenylate-binding protein

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 27 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
70 B8K0D5 (/IPI) P04147 (/IPI) P04147 (/IPI) P04147 (/IPI) P04147 (/IPI) P04147 (/IPI) P04147 (/IPI) P04147 (/IPI) P11940 (/IPI) P11940 (/IPI)
(60 more)
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
40 P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(30 more)
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
32 A2A5N3 (/TAS) B2RXY9 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS)
(22 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
27 P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA)
(17 more)
Poly(U) RNA binding GO:0008266
Interacting selectively and non-covalently with a sequence of uracil residues in an RNA molecule.
27 P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(17 more)
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
26 P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(16 more)
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
25 P11940 (/IPI) P11940 (/IPI) P11940 (/IPI) P11940 (/IPI) P11940 (/IPI) P11940 (/IPI) P11940 (/IPI) P11940 (/IPI) P11940 (/IPI) P11940 (/IPI)
(15 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
24 P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(14 more)
Translation activator activity GO:0008494
Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide.
24 P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS)
(14 more)
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
15 P21187 (/ISS) P21187 (/ISS) P29341 (/ISS) Q5B630 (/ISS) Q62029 (/ISS) Q6DEY7 (/ISS) Q6GR16 (/ISS) Q6IP09 (/ISS) Q6IP09 (/ISS) Q8BN32 (/ISS)
(5 more)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
10 A3KFU5 (/IDA) A3KFU8 (/IDA) Q3UX16 (/IDA) Q6PHQ9 (/IDA) Q7K798 (/IDA) Q91YZ8 (/IDA) Q99LF8 (/IDA) Q9EPH8 (/IDA) Q9U302 (/IDA) V9GXG3 (/IDA)
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
8 A3KFU5 (/ISO) A3KFU8 (/ISO) P29341 (/ISO) Q3UX16 (/ISO) Q6PHQ9 (/ISO) Q91YZ8 (/ISO) Q99LF8 (/ISO) V9GXG3 (/ISO)
Poly(U) RNA binding GO:0008266
Interacting selectively and non-covalently with a sequence of uracil residues in an RNA molecule.
8 A3KFU5 (/ISO) A3KFU8 (/ISO) P29341 (/ISO) Q3UX16 (/ISO) Q6PHQ9 (/ISO) Q91YZ8 (/ISO) Q99LF8 (/ISO) V9GXG3 (/ISO)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
7 P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA)
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
7 P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP)
Ribonuclease inhibitor activity GO:0008428
Stops, prevents or reduces the activity of a ribonuclease, any enzyme that catalyzes the hydrolysis of phosphodiester bonds in chains of RNA.
7 P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA)
Protein kinase A catalytic subunit binding GO:0034236
Interacting selectively and non-covalently with one or both of the catalytic subunits of protein kinase A.
7 P04147 (/IPI) P04147 (/IPI) P04147 (/IPI) P04147 (/IPI) P04147 (/IPI) P04147 (/IPI) P04147 (/IPI)
Promoter-specific chromatin binding GO:1990841
Interacting selectively and non-covalently with a section of chromatin that is associated with gene promoter sequences of DNA.
7 P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
5 P21187 (/ISS) P21187 (/ISS) Q9W158 (/ISS) Q9W158 (/ISS) Q9W158 (/ISS)
Eukaryotic initiation factor 4G binding GO:0031370
Interacting selectively and non-covalently with eukaryotic initiation factor 4G, a polypeptide factor involved in the initiation of ribosome-mediated translation.
4 Q6DEY7 (/ISS) Q6GR16 (/ISS) Q6IP09 (/ISS) Q6IP09 (/ISS)
Protein self-association GO:0043621
Interacting selectively and non-covalently with a domain within the same polypeptide.
4 Q6DEY7 (/ISS) Q6GR16 (/ISS) Q6IP09 (/ISS) Q6IP09 (/ISS)
Eukaryotic initiation factor 4G binding GO:0031370
Interacting selectively and non-covalently with eukaryotic initiation factor 4G, a polypeptide factor involved in the initiation of ribosome-mediated translation.
3 P20965 (/IPI) P20965 (/IPI) Q98SP8 (/IPI)
Protein self-association GO:0043621
Interacting selectively and non-covalently with a domain within the same polypeptide.
3 P20965 (/IPI) P20965 (/IPI) Q98SP8 (/IPI)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
1 P29341 (/ISO)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
1 P29341 (/ISO)
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
1 P29341 (/ISO)
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
1 P29341 (/ISO)

There are 71 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Gene silencing by RNA GO:0031047
Any process in which RNA molecules inactivate expression of target genes.
54 P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS)
(44 more)
Positive regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0060213
Any process that increases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.
54 P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS)
(44 more)
Positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:1900153
Any process that activates or increases the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.
54 P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS) P11940 (/ISS)
(44 more)
Negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:2000623
Any process that stops, prevents or reduces the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.
27 P29341 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS)
(17 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
26 P11940 (/IC) P11940 (/IC) P11940 (/IC) P11940 (/IC) P11940 (/IC) P11940 (/IC) P11940 (/IC) P11940 (/IC) P11940 (/IC) P11940 (/IC)
(16 more)
MRNA polyadenylation GO:0006378
The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript.
25 P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS)
(15 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
24 P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS)
(14 more)
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
24 P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS)
(14 more)
Regulation of mRNA stability GO:0043488
Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.
24 P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS)
(14 more)
Positive regulation of viral genome replication GO:0045070
Any process that activates or increases the frequency, rate or extent of viral genome replication.
24 P11940 (/IMP) P11940 (/IMP) P11940 (/IMP) P11940 (/IMP) P11940 (/IMP) P11940 (/IMP) P11940 (/IMP) P11940 (/IMP) P11940 (/IMP) P11940 (/IMP)
(14 more)
MRNA stabilization GO:0048255
Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules.
24 P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS)
(14 more)
Negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:2000623
Any process that stops, prevents or reduces the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.
24 P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(14 more)
Regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0060211
Any process that modulates the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.
8 P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P31209 (/IDA)
Regulation of translational initiation GO:0006446
Any process that modulates the frequency, rate or extent of translational initiation.
7 P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA)
Regulation of translational initiation GO:0006446
Any process that modulates the frequency, rate or extent of translational initiation.
7 P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP)
Regulation of mRNA stability GO:0043488
Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.
7 A3KFU5 (/IMP) A3KFU8 (/IMP) Q3UX16 (/IMP) Q6PHQ9 (/IMP) Q91YZ8 (/IMP) Q99LF8 (/IMP) V9GXG3 (/IMP)
Regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0060211
Any process that modulates the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.
7 P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP) P04147 (/IMP)
Myeloid cell development GO:0061515
The process whose specific outcome is the progression of a myeloid cell over time, from its formation to the mature structure.
7 A3KFU5 (/IMP) A3KFU8 (/IMP) Q3UX16 (/IMP) Q6PHQ9 (/IMP) Q91YZ8 (/IMP) Q99LF8 (/IMP) V9GXG3 (/IMP)
MRNA stabilization GO:0048255
Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules.
4 Q6DEY7 (/ISS) Q6GR16 (/ISS) Q6IP09 (/ISS) Q6IP09 (/ISS)
Negative regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0060212
Any process that decreases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.
4 P20965 (/IDA) P20965 (/IDA) P31209 (/IDA) Q98SP8 (/IDA)
Negative regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0060212
Any process that decreases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.
4 Q6DEY7 (/ISS) Q6GR16 (/ISS) Q6IP09 (/ISS) Q6IP09 (/ISS)
RNA processing GO:0006396
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
3 Q13310 (/TAS) Q13310 (/TAS) Q13310 (/TAS)
RNA catabolic process GO:0006401
The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
3 Q13310 (/TAS) Q13310 (/TAS) Q13310 (/TAS)
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
3 Q13310 (/TAS) Q13310 (/TAS) Q13310 (/TAS)
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
3 F1QB54 (/IMP) Q499B6 (/IMP) Q6P5M4 (/IMP)
Blood coagulation GO:0007596
The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
3 Q13310 (/TAS) Q13310 (/TAS) Q13310 (/TAS)
Long-term memory GO:0007616
The memory process that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation.
3 Q9W158 (/IMP) Q9W158 (/IMP) Q9W158 (/IMP)
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
3 Q9W158 (/IDA) Q9W158 (/IDA) Q9W158 (/IDA)
MRNA stabilization GO:0048255
Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules.
3 P20965 (/IDA) P20965 (/IDA) Q98SP8 (/IDA)
Oocyte maturation GO:0001556
A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization.
2 A2A5N3 (/IDA) B2RXY9 (/IDA)
Oocyte maturation GO:0001556
A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization.
2 A2A5N3 (/IMP) B2RXY9 (/IMP)
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
2 A2A5N3 (/IDA) B2RXY9 (/IDA)
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
2 A2A5N3 (/IMP) B2RXY9 (/IMP)
MRNA polyadenylation GO:0006378
The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript.
2 A2A5N3 (/IMP) B2RXY9 (/IMP)
Male meiosis cytokinesis GO:0007112
A cell cycle process that occurs as part of the male meiotic cell cycle and results in the division of the cytoplasm of a cell to produce two daughter cells.
2 P21187 (/IMP) P21187 (/IMP)
Male meiotic nuclear division GO:0007140
A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline.
2 P21187 (/IMP) P21187 (/IMP)
Chemical synaptic transmission GO:0007268
The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.
2 P21187 (/IMP) P21187 (/IMP)
Spermatogenesis GO:0007283
The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.
2 P21187 (/IMP) P21187 (/IMP)
Spermatid nucleus differentiation GO:0007289
The specialization of the spermatid nucleus during the development of a spermatid into a mature male gamete competent for fertilization.
2 P21187 (/IMP) P21187 (/IMP)
Dorsal/ventral pattern formation GO:0009953
The regionalization process in which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.
2 P21187 (/IMP) P21187 (/IMP)
MRNA metabolic process GO:0016071
The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
2 Q9H361 (/NAS) Q9H361 (/NAS)
Chordate embryonic development GO:0043009
The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.
2 Q6DEY7 (/ISS) Q6GR16 (/ISS)
Regulation of compound eye photoreceptor development GO:0045314
Any process that modulates the frequency, rate or extent of compound eye photoreceptor development.
2 P21187 (/IGI) P21187 (/IGI)
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
2 P21187 (/IGI) P21187 (/IGI)
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
2 P21187 (/TAS) P21187 (/TAS)
Chromatin-mediated maintenance of transcription GO:0048096
Maintenance of transcription by remodelling of chromatin into an 'open configuration'. Once established, this regulation is mitotically stable and is maintained over many cell divisions. It is also heritable.
2 A2A5N3 (/IMP) B2RXY9 (/IMP)
Oogenesis GO:0048477
The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
2 P21187 (/IMP) P21187 (/IMP)
Oocyte development GO:0048599
The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.
2 P21187 (/IMP) P21187 (/IMP)
Nucleus localization GO:0051647
Any process in which the nucleus is transported to, and/or maintained in, a specific location within the cell.
2 A2A5N3 (/IMP) B2RXY9 (/IMP)
Negative regulation of neuron death GO:1901215
Any process that stops, prevents or reduces the frequency, rate or extent of neuron death.
2 P21187 (/IGI) P21187 (/IGI)
Nematode larval development GO:0002119
The process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.
1 Q9U302 (/IMP)
Germ cell development GO:0007281
The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
1 Q9U302 (/IMP)
Regulation of mitotic cell cycle, embryonic GO:0009794
Any process that modulates the frequency, rate or extent of replication and segregation of genetic material in the embryo.
1 Q9U302 (/IGI)
MRNA metabolic process GO:0016071
The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
1 Q9U302 (/IMP)
Gene silencing by RNA GO:0031047
Any process in which RNA molecules inactivate expression of target genes.
1 P29341 (/IMP)
MRNA 3'-end processing GO:0031124
Any process involved in forming the mature 3' end of an mRNA molecule.
1 P31209 (/ISO)
Germ cell proliferation GO:0036093
The multiplication or reproduction of germ cells, reproductive cells in multicellular organisms, resulting in the expansion of a cell population.
1 Q9U302 (/IMP)
Establishment of mitotic spindle localization GO:0040001
The cell cycle process in which the directed movement of the mitotic spindle to a specific location in the cell occurs.
1 Q9U302 (/IMP)
Positive regulation of vulval development GO:0040026
Any process that activates or increases the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.
1 Q9U302 (/IMP)
Chordate embryonic development GO:0043009
The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.
1 Q98SP8 (/IEP)
Positive regulation of viral genome replication GO:0045070
Any process that activates or increases the frequency, rate or extent of viral genome replication.
1 P29341 (/ISO)
Positive regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0060213
Any process that increases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.
1 P29341 (/IMP)
Regulation of spindle assembly GO:0090169
Any process that modulates the rate, frequency or extent of spindle assembly. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.
1 Q9U302 (/IGI)
Positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:1900153
Any process that activates or increases the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.
1 P29341 (/IMP)
Negative regulation of exoribonuclease activity GO:1901918
Any process that stops, prevents or reduces the frequency, rate or extent of exoribonuclease activity.
1 P31209 (/IDA)
Positive regulation of exoribonuclease activity GO:1901919
Any process that activates or increases the frequency, rate or extent of exoribonuclease activity.
1 P31209 (/IDA)
Regulation of mitotic cytokinetic process GO:1903436
Any process that modulates the frequency, rate or extent of mitotic cytokinetic process.
1 Q9U302 (/IGI)
Positive regulation of cytoplasmic translational initiation GO:1904690
Any process that activates or increases the frequency, rate or extent of cytoplasmic translational initiation.
1 P31209 (/ISO)
Positive regulation of germ cell proliferation GO:1905938
Any process that activates or increases the frequency, rate or extent of germ cell proliferation.
1 Q9U302 (/IMP)
Positive regulation of gonad development GO:1905941
Any process that activates or increases the frequency, rate or extent of gonad development.
1 Q9U302 (/IMP)
Negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:2000623
Any process that stops, prevents or reduces the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.
1 P29341 (/ISO)

There are 41 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
67 A0A024R9C1 (/IDA) A0A024R9C1 (/IDA) A0A024R9C1 (/IDA) A0A024R9C1 (/IDA) A0A024R9C1 (/IDA) A0A024R9C1 (/IDA) A0A024R9C1 (/IDA) A0A024R9C1 (/IDA) A0A024R9C1 (/IDA) A0A024R9C1 (/IDA)
(57 more)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
45 P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA)
(35 more)
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
40 P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(30 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
34 P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(24 more)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
29 P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(19 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
27 P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS)
(17 more)
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
27 P29341 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS)
(17 more)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
27 P29341 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS) P61286 (/ISS)
(17 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
24 P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS) P11940 (/TAS)
(14 more)
Focal adhesion GO:0005925
Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
24 P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA)
(14 more)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
24 P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA) P11940 (/HDA)
(14 more)
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
24 P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(14 more)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
24 P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA) P11940 (/IDA)
(14 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
16 P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P21187 (/IDA) P21187 (/IDA) P29341 (/IDA)
(6 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
9 P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P21187 (/HDA) P21187 (/HDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
8 A3KFU5 (/ISO) A3KFU8 (/ISO) P29341 (/ISO) Q3UX16 (/ISO) Q6PHQ9 (/ISO) Q91YZ8 (/ISO) Q99LF8 (/ISO) V9GXG3 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
8 A3KFU5 (/ISO) A3KFU8 (/ISO) P29341 (/ISO) Q3UX16 (/ISO) Q6PHQ9 (/ISO) Q91YZ8 (/ISO) Q99LF8 (/ISO) V9GXG3 (/ISO)
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
8 A3KFU5 (/ISO) A3KFU8 (/ISO) P29341 (/ISO) Q3UX16 (/ISO) Q6PHQ9 (/ISO) Q91YZ8 (/ISO) Q99LF8 (/ISO) V9GXG3 (/ISO)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
8 A3KFU5 (/ISO) A3KFU8 (/ISO) P29341 (/ISO) Q3UX16 (/ISO) Q6PHQ9 (/ISO) Q91YZ8 (/ISO) Q99LF8 (/ISO) V9GXG3 (/ISO)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
7 P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA) P04147 (/HDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
7 A3KFU5 (/ISO) A3KFU8 (/ISO) Q3UX16 (/ISO) Q6PHQ9 (/ISO) Q91YZ8 (/ISO) Q99LF8 (/ISO) V9GXG3 (/ISO)
Ribosome GO:0005840
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
7 P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA) P04147 (/IDA)
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
4 P20965 (/IDA) P20965 (/IDA) Q19579 (/IDA) Q9U302 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
3 P21187 (/HDA) P21187 (/HDA) P31209 (/HDA)
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
3 B8K0D5 (/IPI) Q6TGY6 (/IPI) Q803E7 (/IPI)
P-body GO:0000932
A focus in the cytoplasm where mRNAs may become inactivated by decapping or some other mechanism. Protein and RNA localized to these foci are involved in mRNA degradation, nonsense-mediated mRNA decay (NMD), translational repression, and RNA-mediated gene silencing.
2 Q7K798 (/IDA) Q9U302 (/IDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
2 Q6DEY7 (/ISS) Q6GR16 (/ISS)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
2 Q9H361 (/NAS) Q9H361 (/NAS)
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
2 Q6IP09 (/ISS) Q6IP09 (/ISS)
P granule GO:0043186
A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes.
2 Q7K798 (/IDA) Q9U302 (/IDA)
Precatalytic spliceosome GO:0071011
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
2 P21187 (/HDA) P21187 (/HDA)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
2 P21187 (/HDA) P21187 (/HDA)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
1 Q9EPH8 (/IDA)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
1 P29341 (/ISO)
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
1 P29341 (/ISO)
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
1 P29341 (/EXP)
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
1 P29341 (/IDA)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
1 P29341 (/ISO)
Post-mRNA release spliceosomal complex GO:0071014
A spliceosomal complex that is formed following the release of the spliced product from the post-spliceosomal complex and contains the excised intron and three snRNPs, including U5.
1 P31209 (/IDA)
Messenger ribonucleoprotein complex GO:1990124
A ribonucleoprotein complex containing both protein and messenger RNA (mRNA) molecules.
1 Q9EPH8 (/IDA)
Messenger ribonucleoprotein complex GO:1990124
A ribonucleoprotein complex containing both protein and messenger RNA (mRNA) molecules.
1 P29341 (/ISO)
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