The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 24: Heterogeneous nuclear ribonucleoprotein q isoform
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 11 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
50 |
O43390 (/IPI)
O43390 (/IPI)
O43390 (/IPI)
O43390 (/IPI)
O43390 (/IPI)
O43390 (/IPI)
O43390 (/IPI)
O43390 (/IPI)
O43390 (/IPI)
O43390 (/IPI)
(40 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
49 |
O43390 (/HDA)
O43390 (/HDA)
O43390 (/HDA)
O43390 (/HDA)
O43390 (/HDA)
O43390 (/HDA)
O43390 (/HDA)
O43390 (/HDA)
O43390 (/HDA)
O43390 (/HDA)
(39 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
28 |
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
(18 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
21 |
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
(11 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
19 |
A0A0B4KGF9 (/IDA)
A0A0B4KGK5 (/IDA)
A0A0B4KGK8 (/IDA)
A0A0B4KH21 (/IDA)
A0A0B4KH24 (/IDA)
A0A0B4KHH8 (/IDA)
A0A0B4KHI4 (/IDA)
A0A0B4KHT5 (/IDA)
A0A0R4IHZ5 (/IDA)
A0A0R4ITI5 (/IDA)
(9 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
16 |
A0A0B4KGF9 (/ISS)
A0A0B4KGK5 (/ISS)
A0A0B4KGK8 (/ISS)
A0A0B4KH21 (/ISS)
A0A0B4KH24 (/ISS)
A0A0B4KHH8 (/ISS)
A0A0B4KHI4 (/ISS)
A0A0B4KHT5 (/ISS)
A4V364 (/ISS)
A8JR54 (/ISS)
(6 more) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
2 | Q566E4 (/IDA) Q7TP47 (/IDA) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
1 | A0A0B4KHI4 (/IDA) |
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
|
1 | Q7TMK9 (/IDA) |
MRNA 5'-UTR binding GO:0048027
Interacting selectively and non-covalently with the 5' untranslated region of an mRNA molecule.
|
1 | Q7TP47 (/IDA) |
There are 29 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
65 |
A0A0B4KGF9 (/IC)
A0A0B4KGK5 (/IC)
A0A0B4KGK8 (/IC)
A0A0B4KH21 (/IC)
A0A0B4KH24 (/IC)
A0A0B4KHH8 (/IC)
A0A0B4KHI4 (/IC)
A0A0B4KHT5 (/IC)
A4V364 (/IC)
A8JR54 (/IC)
(55 more) |
Osteoblast differentiation GO:0001649
The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone.
|
28 |
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
(18 more) |
RNA processing GO:0006396
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
|
28 |
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
(18 more) |
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
|
28 |
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
(18 more) |
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
28 |
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
(18 more) |
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
28 |
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
(18 more) |
CRD-mediated mRNA stabilization GO:0070934
An mRNA stabilization process in which one or more RNA-binding proteins associate with a sequence in the open reading frame called the coding region instability determinant (CRD).
|
28 |
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
O60506 (/IMP)
(18 more) |
Cellular response to interferon-gamma GO:0071346
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.
|
28 |
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
(18 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
21 |
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
(11 more) |
MRNA processing GO:0006397
Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
|
21 |
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
(11 more) |
RNA metabolic process GO:0016070
The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
|
21 |
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
(11 more) |
Oocyte dorsal/ventral axis specification GO:0007310
The establishment, maintenance and elaboration of the dorsal/ventral axis of the oocyte. An example of this is found in Drosophila melanogaster.
|
16 |
A0A0B4KGF9 (/IMP)
A0A0B4KGK5 (/IMP)
A0A0B4KGK8 (/IMP)
A0A0B4KH21 (/IMP)
A0A0B4KH24 (/IMP)
A0A0B4KHH8 (/IMP)
A0A0B4KHI4 (/IMP)
A0A0B4KHT5 (/IMP)
A4V364 (/IMP)
A8JR54 (/IMP)
(6 more) |
Negative regulation of synaptic growth at neuromuscular junction GO:0045886
Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic growth at neuromuscular junction.
|
16 |
A0A0B4KGF9 (/IMP)
A0A0B4KGK5 (/IMP)
A0A0B4KGK8 (/IMP)
A0A0B4KH21 (/IMP)
A0A0B4KH24 (/IMP)
A0A0B4KHH8 (/IMP)
A0A0B4KHI4 (/IMP)
A0A0B4KHT5 (/IMP)
A4V364 (/IMP)
A8JR54 (/IMP)
(6 more) |
Regulation of oskar mRNA translation GO:0046011
Any process that modulates the frequency, rate or extent of oskar mRNA translation. To ensure the localization of Oskar protein at the posterior pole of the oocyte, translation of oskar mRNA is repressed during its transport to the posterior pole and activated upon localization of the mRNA at the posterior cortex.
|
16 |
A0A0B4KGF9 (/IMP)
A0A0B4KGK5 (/IMP)
A0A0B4KGK8 (/IMP)
A0A0B4KH21 (/IMP)
A0A0B4KH24 (/IMP)
A0A0B4KHH8 (/IMP)
A0A0B4KHI4 (/IMP)
A0A0B4KHT5 (/IMP)
A4V364 (/IMP)
A8JR54 (/IMP)
(6 more) |
Dorsal appendage formation GO:0046843
Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.
|
16 |
A0A0B4KGF9 (/IMP)
A0A0B4KGK5 (/IMP)
A0A0B4KGK8 (/IMP)
A0A0B4KH21 (/IMP)
A0A0B4KH24 (/IMP)
A0A0B4KHH8 (/IMP)
A0A0B4KHI4 (/IMP)
A0A0B4KHT5 (/IMP)
A4V364 (/IMP)
A8JR54 (/IMP)
(6 more) |
Regulation of neuromuscular synaptic transmission GO:1900073
Any process that modulates the frequency, rate or extent of neuromuscular synaptic transmission.
|
16 |
A0A0B4KGF9 (/IMP)
A0A0B4KGK5 (/IMP)
A0A0B4KGK8 (/IMP)
A0A0B4KH21 (/IMP)
A0A0B4KH24 (/IMP)
A0A0B4KHH8 (/IMP)
A0A0B4KHI4 (/IMP)
A0A0B4KHT5 (/IMP)
A4V364 (/IMP)
A8JR54 (/IMP)
(6 more) |
Negative regulation of catalytic activity GO:0043086
Any process that stops or reduces the activity of an enzyme.
|
9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Positive regulation of mRNA catabolic process GO:0061014
Any process that increases the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
|
9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
MRNA destabilization GO:0061157
Any process that decreases the stability of an mRNA molecule, making it more vulnerable to degradative processes. Messenger RNA is the intermediate molecule between DNA and protein. It includes UTR and coding sequences. It does not contain introns.
|
9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Axon extension involved in axon guidance GO:0048846
The long distance growth of a single cell process, that is involved in the migration of an axon growth cone, where the migration is directed to a specific target site by a combination of attractive and repulsive cues.
|
3 | A0A0R4IHZ5 (/IMP) A0A0R4ITI5 (/IMP) A0A0R4ITR2 (/IMP) |
Circadian rhythm GO:0007623
Any biological process in an organism that recurs with a regularity of approximately 24 hours.
|
2 | Q566E4 (/IEP) Q7TP47 (/IEP) |
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
1 | Q7TMK9 (/ISO) |
Negative regulation of catalytic activity GO:0043086
Any process that stops or reduces the activity of an enzyme.
|
1 | Q566E4 (/IMP) |
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
1 | Q7TP47 (/IMP) |
Positive regulation of mRNA catabolic process GO:0061014
Any process that increases the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
|
1 | Q566E4 (/IMP) |
MRNA destabilization GO:0061157
Any process that decreases the stability of an mRNA molecule, making it more vulnerable to degradative processes. Messenger RNA is the intermediate molecule between DNA and protein. It includes UTR and coding sequences. It does not contain introns.
|
1 | Q566E4 (/IMP) |
CRD-mediated mRNA stabilization GO:0070934
An mRNA stabilization process in which one or more RNA-binding proteins associate with a sequence in the open reading frame called the coding region instability determinant (CRD).
|
1 | Q7TMK9 (/ISO) |
Cellular response to interferon-gamma GO:0071346
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.
|
1 | Q7TMK9 (/ISO) |
Negative regulation of mRNA modification GO:0090367
Any process that decreases the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.
|
1 | Q7TP47 (/IMP) |
There are 37 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
49 |
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
(39 more) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
49 |
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
(39 more) |
Histone pre-mRNA 3'end processing complex GO:0071204
A ribonucleoprotein that binds to specific sites in, and is required for cleavage of, the 3'-end of histone pre-mRNAs. The complex contains the U7 snRNP and additional proteins, including the stem-loop binding protein (SLBP) and the exonuclease 3'hExo/Eri-1.
|
29 |
O60506 (/ISS)
O60506 (/ISS)
O60506 (/ISS)
O60506 (/ISS)
O60506 (/ISS)
O60506 (/ISS)
O60506 (/ISS)
O60506 (/ISS)
O60506 (/ISS)
O60506 (/ISS)
(19 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
28 |
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
(18 more) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
28 |
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
O60506 (/HDA)
(18 more) |
CRD-mediated mRNA stability complex GO:0070937
A protein complex that binds to, and promotes stabilization of, mRNA molecules containing the coding region instability determinant (CRD). In human, it may consist of IGF2BP1, HNRNPU, SYNCRIP/HNRNPQ, YBX1, and DHX9.
|
28 |
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
(18 more) |
GAIT complex GO:0097452
A protein complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. The complex binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs and suppresses their translation by blocking the recruitment of the 43S ribosomal complex to m7G cap-bound eIF4G. In humans it includes RPL13A, EPRS, SYNCRIP and GAPDH; mouse complexes lack SYNCRIP.
|
28 |
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
O60506 (/IDA)
(18 more) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
28 |
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
O60506 (/TAS)
(18 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
27 |
A0A0B4KGF9 (/IDA)
A0A0B4KGK5 (/IDA)
A0A0B4KGK8 (/IDA)
A0A0B4KH21 (/IDA)
A0A0B4KH24 (/IDA)
A0A0B4KHH8 (/IDA)
A0A0B4KHI4 (/IDA)
A0A0B4KHT5 (/IDA)
A2AW41 (/IDA)
A4V364 (/IDA)
(17 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
21 |
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
O43390 (/IDA)
(11 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
21 |
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
O43390 (/TAS)
(11 more) |
Spliceosomal complex GO:0005681
Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.
|
21 |
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
O43390 (/NAS)
(11 more) |
Ribonucleoprotein granule GO:0035770
A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.
|
16 |
A0A0B4KGF9 (/IDA)
A0A0B4KGK5 (/IDA)
A0A0B4KGK8 (/IDA)
A0A0B4KH21 (/IDA)
A0A0B4KH24 (/IDA)
A0A0B4KHH8 (/IDA)
A0A0B4KHI4 (/IDA)
A0A0B4KHT5 (/IDA)
A4V364 (/IDA)
A8JR54 (/IDA)
(6 more) |
Precatalytic spliceosome GO:0071011
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
|
16 |
A0A0B4KGF9 (/HDA)
A0A0B4KGK5 (/HDA)
A0A0B4KGK8 (/HDA)
A0A0B4KH21 (/HDA)
A0A0B4KH24 (/HDA)
A0A0B4KHH8 (/HDA)
A0A0B4KHI4 (/HDA)
A0A0B4KHT5 (/HDA)
A4V364 (/HDA)
A8JR54 (/HDA)
(6 more) |
Postsynapse of neuromuscular junction GO:0098975
The postsynapse of a neuromuscular junction. In vertebrate muscles this includes the motor end-plate, consisting of postjunctional folds of the sarcolemma.
|
16 |
A0A0B4KGF9 (/IDA)
A0A0B4KGK5 (/IDA)
A0A0B4KGK8 (/IDA)
A0A0B4KH21 (/IDA)
A0A0B4KH24 (/IDA)
A0A0B4KHH8 (/IDA)
A0A0B4KHI4 (/IDA)
A0A0B4KHT5 (/IDA)
A4V364 (/IDA)
A8JR54 (/IDA)
(6 more) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
10 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q7TMK9 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
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10 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q7TMK9 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
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9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
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9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
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9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
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9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Growth cone GO:0030426
The migrating motile tip of a growing neuron projection, where actin accumulates, and the actin cytoskeleton is the most dynamic.
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9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Axon terminus GO:0043679
Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal button is a specialized region of it.
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9 | A2AW41 (/ISO) F7B5B5 (/ISO) Q3U8W9 (/ISO) Q3UKV5 (/ISO) Q3UMT8 (/ISO) Q3UZI0 (/ISO) Q8VHM5 (/ISO) Q99KG1 (/ISO) Q9CT37 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
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3 | Q566E4 (/IDA) Q7TMK9 (/IDA) Q7TP47 (/IDA) |
CRD-mediated mRNA stability complex GO:0070937
A protein complex that binds to, and promotes stabilization of, mRNA molecules containing the coding region instability determinant (CRD). In human, it may consist of IGF2BP1, HNRNPU, SYNCRIP/HNRNPQ, YBX1, and DHX9.
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2 | Q7TMK9 (/ISS) Q7TP47 (/ISS) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
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2 | Q7TMK9 (/ISS) Q7TP47 (/ISS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
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1 | A0A0B4KHI4 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
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1 | Q7TP47 (/IDA) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
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1 | Q566E4 (/IDA) |
Growth cone GO:0030426
The migrating motile tip of a growing neuron projection, where actin accumulates, and the actin cytoskeleton is the most dynamic.
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1 | Q566E4 (/IDA) |
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
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1 | Q7TP47 (/IDA) |
Axon terminus GO:0043679
Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal button is a specialized region of it.
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1 | Q566E4 (/IDA) |
Basal cortex GO:0045180
The region that lies just beneath the plasma membrane on the basal edge of a cell.
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1 | A0A0B4KHI4 (/IDA) |
CRD-mediated mRNA stability complex GO:0070937
A protein complex that binds to, and promotes stabilization of, mRNA molecules containing the coding region instability determinant (CRD). In human, it may consist of IGF2BP1, HNRNPU, SYNCRIP/HNRNPQ, YBX1, and DHX9.
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1 | Q7TMK9 (/ISO) |
Histone pre-mRNA 3'end processing complex GO:0071204
A ribonucleoprotein that binds to specific sites in, and is required for cleavage of, the 3'-end of histone pre-mRNAs. The complex contains the U7 snRNP and additional proteins, including the stem-loop binding protein (SLBP) and the exonuclease 3'hExo/Eri-1.
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1 | Q7TMK9 (/IDA) |
GAIT complex GO:0097452
A protein complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. The complex binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs and suppresses their translation by blocking the recruitment of the 43S ribosomal complex to m7G cap-bound eIF4G. In humans it includes RPL13A, EPRS, SYNCRIP and GAPDH; mouse complexes lack SYNCRIP.
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1 | Q7TMK9 (/ISO) |
Proximal dendrite GO:1990635
The dendrite of the dendritic tree that is closest to the neuronal cell body (the soma).
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1 | Q7TP47 (/IDA) |