The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 158: heterogeneous nuclear ribonucleoprotein A3 isoform...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 7 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
7 | P51991 (/HDA) P51991 (/HDA) P51991 (/HDA) P51991 (/HDA) P51991 (/HDA) P51991 (/HDA) P51991 (/HDA) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
7 | P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
7 | Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
7 | Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
7 | P51991 (/IPI) P51991 (/IPI) P51991 (/IPI) P51991 (/IPI) P51991 (/IPI) P51991 (/IPI) P51991 (/IPI) |
RNA transmembrane transporter activity GO:0051033
Enables the transfer of RNA, ribonucleic acid, from one side of a membrane to the other.
|
7 | Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) |
RNA transmembrane transporter activity GO:0051033
Enables the transfer of RNA, ribonucleic acid, from one side of a membrane to the other.
|
7 | Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) |
There are 5 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
7 | P51991 (/IC) P51991 (/IC) P51991 (/IC) P51991 (/IC) P51991 (/IC) P51991 (/IC) P51991 (/IC) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
7 | P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) |
RNA metabolic process GO:0016070
The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
|
7 | P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) |
MRNA transport GO:0051028
The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
7 | Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) Q6URK4 (/IMP) |
MRNA transport GO:0051028
The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
7 | Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) |
There are 17 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
14 |
P51991 (/IDA)
P51991 (/IDA)
P51991 (/IDA)
P51991 (/IDA)
P51991 (/IDA)
P51991 (/IDA)
P51991 (/IDA)
Q6URK4 (/IDA)
Q6URK4 (/IDA)
Q6URK4 (/IDA)
(4 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
9 | B4DDB6 (/IDA) B4DDB6 (/IDA) P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
7 | Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
7 | P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
7 | Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
7 | Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) |
Postsynaptic density GO:0014069
An electron dense network of proteins within and adjacent to the postsynaptic membrane of an asymmetric, neuron-neuron synapse. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.
|
7 | Q6URK4 (/EXP) Q6URK4 (/EXP) Q6URK4 (/EXP) Q6URK4 (/EXP) Q6URK4 (/EXP) Q6URK4 (/EXP) Q6URK4 (/EXP) |
Postsynaptic density GO:0014069
An electron dense network of proteins within and adjacent to the postsynaptic membrane of an asymmetric, neuron-neuron synapse. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.
|
7 | Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) |
Postsynaptic density GO:0014069
An electron dense network of proteins within and adjacent to the postsynaptic membrane of an asymmetric, neuron-neuron synapse. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.
|
7 | Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) |
Ribonucleoprotein granule GO:0035770
A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.
|
7 | Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) |
Ribonucleoprotein granule GO:0035770
A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.
|
7 | Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) |
Neuron projection GO:0043005
A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
|
7 | Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) |
Neuron projection GO:0043005
A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
|
7 | Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
7 | P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) P51991 (/IDA) |
Messenger ribonucleoprotein complex GO:1990124
A ribonucleoprotein complex containing both protein and messenger RNA (mRNA) molecules.
|
7 | Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) Q6URK4 (/IDA) |
Messenger ribonucleoprotein complex GO:1990124
A ribonucleoprotein complex containing both protein and messenger RNA (mRNA) molecules.
|
7 | Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) Q8BG05 (/ISO) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
7 | P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) P51991 (/TAS) |