The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 119: RNA-binding motif protein, X chromosome
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 22 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
30 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(20 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
29 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(19 more) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
28 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(18 more) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
28 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(18 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
22 |
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
(12 more) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
20 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(10 more) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
20 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(10 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
20 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(10 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
19 |
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
(9 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
19 |
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
(9 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
19 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(9 more) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
19 |
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
(9 more) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
19 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(9 more) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
19 |
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
P38159 (/IPI)
(9 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
2 | Q91VM5 (/ISO) Q9WV02 (/ISO) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
1 | Q9WV02 (/ISO) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
1 | Q9WV02 (/ISO) |
Single-stranded RNA binding GO:0003727
Interacting selectively and non-covalently with single-stranded RNA.
|
1 | Q4V898 (/IDA) |
Single-stranded RNA binding GO:0003727
Interacting selectively and non-covalently with single-stranded RNA.
|
1 | Q9WV02 (/ISO) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
1 | Q9WV02 (/ISO) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
1 | Q9WV02 (/ISO) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
1 | Q9WV02 (/ISO) |
There are 37 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
48 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(38 more) |
Positive regulation of mRNA splicing, via spliceosome GO:0048026
Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
48 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(38 more) |
Protein homooligomerization GO:0051260
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
|
48 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(38 more) |
Transcription by RNA polymerase II GO:0006366
The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
|
30 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(20 more) |
Membrane protein ectodomain proteolysis GO:0006509
The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain).
|
30 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(20 more) |
Cellular response to interleukin-1 GO:0071347
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.
|
30 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(20 more) |
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
29 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(19 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
29 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(19 more) |
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
20 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(10 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
20 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(10 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
19 |
P38159 (/IC)
P38159 (/IC)
P38159 (/IC)
P38159 (/IC)
P38159 (/IC)
P38159 (/IC)
P38159 (/IC)
P38159 (/IC)
P38159 (/IC)
P38159 (/IC)
(9 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
19 |
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
(9 more) |
Osteoblast differentiation GO:0001649
The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone.
|
19 |
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
(9 more) |
Transcription by RNA polymerase II GO:0006366
The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
|
19 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(9 more) |
Membrane protein ectodomain proteolysis GO:0006509
The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain).
|
19 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(9 more) |
RNA metabolic process GO:0016070
The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
|
19 |
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
(9 more) |
Protein complex oligomerization GO:0051259
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
|
19 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(9 more) |
Cellular response to interleukin-1 GO:0071347
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.
|
19 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(9 more) |
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
2 | Q91VM5 (/ISO) Q9WV02 (/ISO) |
MRNA splice site selection GO:0006376
Selection of a splice site by components of the assembling spliceosome.
|
2 | Q91VM5 (/ISO) Q9WV02 (/ISO) |
Hematopoietic progenitor cell differentiation GO:0002244
The process in which precursor cell type acquires the specialized features of a hematopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells.
|
1 | O35698 (/IMP) |
Transcription by RNA polymerase II GO:0006366
The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
|
1 | Q9WV02 (/ISO) |
MRNA splice site selection GO:0006376
Selection of a splice site by components of the assembling spliceosome.
|
1 | P84586 (/IDA) |
MRNA splice site selection GO:0006376
Selection of a splice site by components of the assembling spliceosome.
|
1 | Q4V898 (/IMP) |
Membrane protein ectodomain proteolysis GO:0006509
The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain).
|
1 | Q9WV02 (/ISO) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q4V898 (/IMP) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q9WV02 (/ISO) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
1 | Q91VM5 (/IMP) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
1 | Q9WV02 (/ISO) |
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
1 | P84586 (/IDA) |
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
1 | Q91VM5 (/ISO) |
Positive regulation of mRNA splicing, via spliceosome GO:0048026
Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
1 | P84586 (/IDA) |
Positive regulation of mRNA splicing, via spliceosome GO:0048026
Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
1 | Q91VM5 (/ISO) |
Protein complex oligomerization GO:0051259
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
|
1 | Q9WV02 (/ISO) |
Protein homooligomerization GO:0051260
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
|
1 | P84586 (/IDA) |
Protein homooligomerization GO:0051260
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
|
1 | Q91VM5 (/ISO) |
Cellular response to interleukin-1 GO:0071347
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.
|
1 | Q9WV02 (/ISO) |
There are 20 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
30 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(20 more) |
Nuclear euchromatin GO:0005719
The dispersed less dense form of chromatin in the interphase nucleus. It exists in at least two forms, a some being in the form of transcriptionally active chromatin which is the least condensed, while the rest is inactive euchromatin which is more condensed than active chromatin but less condensed than heterochromatin.
|
30 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(20 more) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
30 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(20 more) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
30 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(20 more) |
Supraspliceosomal complex GO:0044530
Multicomponent complex of RNA and proteins that is composed of four active spliceosomes, termed native spliceosomes, connected to each other by the pre-mRNA. The supraspliceosome is the nuclear machine where the pre-mRNA processing takes place, like the 5'-end capping, 3'-end cleavage, splicing and editing.
|
29 |
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
A5A6M3 (/ISS)
(19 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
22 |
O35698 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(12 more) |
Supraspliceosomal complex GO:0044530
Multicomponent complex of RNA and proteins that is composed of four active spliceosomes, termed native spliceosomes, connected to each other by the pre-mRNA. The supraspliceosome is the nuclear machine where the pre-mRNA processing takes place, like the 5'-end capping, 3'-end cleavage, splicing and editing.
|
20 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(10 more) |
Extracellular space GO:0005615
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
|
19 |
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
(9 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
19 |
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
P38159 (/TAS)
(9 more) |
Nuclear euchromatin GO:0005719
The dispersed less dense form of chromatin in the interphase nucleus. It exists in at least two forms, a some being in the form of transcriptionally active chromatin which is the least condensed, while the rest is inactive euchromatin which is more condensed than active chromatin but less condensed than heterochromatin.
|
19 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(9 more) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
19 |
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
P38159 (/HDA)
(9 more) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
19 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(9 more) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
19 |
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
P38159 (/IDA)
(9 more) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
19 |
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
P38159 (/NAS)
(9 more) |
Supraspliceosomal complex GO:0044530
Multicomponent complex of RNA and proteins that is composed of four active spliceosomes, termed native spliceosomes, connected to each other by the pre-mRNA. The supraspliceosome is the nuclear machine where the pre-mRNA processing takes place, like the 5'-end capping, 3'-end cleavage, splicing and editing.
|
2 | Q91VM5 (/ISO) Q9WV02 (/ISO) |
Male germ cell nucleus GO:0001673
The nucleus of a male germ cell, a reproductive cell in males.
|
1 | O35698 (/IC) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9WV02 (/ISO) |
Nuclear euchromatin GO:0005719
The dispersed less dense form of chromatin in the interphase nucleus. It exists in at least two forms, a some being in the form of transcriptionally active chromatin which is the least condensed, while the rest is inactive euchromatin which is more condensed than active chromatin but less condensed than heterochromatin.
|
1 | Q9WV02 (/ISO) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
1 | Q9WV02 (/ISO) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
1 | Q9WV02 (/ISO) |