The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 103: Polyadenylate-binding protein RBP47B
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
10 | Q0WW84 (/IDA) Q0WW84 (/IDA) Q8VXZ9 (/IDA) Q8VXZ9 (/IDA) Q93W34 (/IDA) Q93W34 (/IDA) Q9SAB3 (/IDA) Q9SAB3 (/IDA) Q9SX79 (/IDA) Q9SX80 (/IDA) |
|
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
|
10 | Q0WW84 (/ISS) Q0WW84 (/ISS) Q8VXZ9 (/ISS) Q8VXZ9 (/ISS) Q93W34 (/ISS) Q93W34 (/ISS) Q9SAB3 (/ISS) Q9SAB3 (/ISS) Q9SX79 (/ISS) Q9SX80 (/ISS) |
|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
2 | Q9SAB3 (/IDA) Q9SAB3 (/IDA) |
|
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
|
1 | Q9LEB4 (/IDA) |
There are 4 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cellular response to heat GO:0034605
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
|
6 | Q0WW84 (/ISS) Q0WW84 (/ISS) Q8VXZ9 (/ISS) Q8VXZ9 (/ISS) Q9SX79 (/ISS) Q9SX80 (/ISS) |
|
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
|
2 | Q9SAB3 (/IDA) Q9SAB3 (/IDA) |
|
Response to ozone GO:0010193
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ozone stimulus.
|
2 | Q9SAB3 (/IEP) Q9SAB3 (/IEP) |
|
Stress granule assembly GO:0034063
The aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.
|
2 | Q0WW84 (/IEP) Q0WW84 (/IEP) |
There are 5 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
10 | Q0WW84 (/ISS) Q0WW84 (/ISS) Q8VXZ9 (/ISS) Q8VXZ9 (/ISS) Q93W34 (/ISS) Q93W34 (/ISS) Q9SAB3 (/ISS) Q9SAB3 (/ISS) Q9SX79 (/ISS) Q9SX80 (/ISS) |
|
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
|
6 | Q0WW84 (/ISS) Q0WW84 (/ISS) Q8VXZ9 (/ISS) Q8VXZ9 (/ISS) Q9SX79 (/ISS) Q9SX80 (/ISS) |
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
4 | Q0WW84 (/IDA) Q0WW84 (/IDA) Q93W34 (/IDA) Q93W34 (/IDA) |
|
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
|
2 | Q0WW84 (/IDA) Q0WW84 (/IDA) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9LEB4 (/IDA) |
