The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Hect, E3 ligase catalytic domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: E3 ubiquitin-protein ligase NEDD4-like

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 62 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
33 A1CQG2 (/ISS) A1D3C5 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) B0XQ72 (/ISS) B0XQ72 (/ISS)
(23 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
32 A0A0G2JUY1 (/IPI) A0A0G2JXP3 (/IPI) A0A0G2K612 (/IPI) A2A5Z6 (/IPI) D3ZCF5 (/IPI) F1LRN8 (/IPI) P39940 (/IPI) P39940 (/IPI) P39940 (/IPI) P46934 (/IPI)
(22 more)
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
20 A0A0G2JUY1 (/IDA) A0A0G2JXP3 (/IDA) F1LRN8 (/IDA) P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) Q03280 (/IDA) Q03280 (/IDA) Q5BDP1 (/IDA) Q62940 (/IDA)
(10 more)
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
13 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) P46934 (/IDA) P46935 (/IDA) P46935 (/IDA) Q8CFI0 (/IDA) Q92462 (/IDA) Q9HCE7 (/IDA) Q9HCE7 (/IDA)
(3 more)
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
8 D3ZBM7 (/ISS) E1C656 (/ISS) F1N6G5 (/ISS) F8W2M1 (/ISS) Q28BK1 (/ISS) Q3U0D9 (/ISS) Q6DCL5 (/ISS) Q6DCL5 (/ISS)
Sodium channel inhibitor activity GO:0019871
Stops, prevents, or reduces the activity of a sodium channel.
7 P46934 (/IDA) P46935 (/IDA) P46935 (/IDA) Q8CFI0 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
7 A2A5Z6 (/TAS) Q9CUN6 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HCE7 (/TAS) Q9HCE7 (/TAS)
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
6 A2A5Z6 (/ISO) P46935 (/ISO) P46935 (/ISO) Q3U0D9 (/ISO) Q8CFI0 (/ISO) Q9CUN6 (/ISO)
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
6 Q96PU5 (/TAS) Q96PU5 (/TAS) Q96PU5 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS)
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
6 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP) Q92462 (/IMP) Q9V853 (/IMP) Q9V853 (/IMP)
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
4 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP) Q5BDP1 (/IMP)
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
4 Q96PU5 (/NAS) Q96PU5 (/NAS) Q96PU5 (/NAS) Q9VVI3 (/NAS)
Ubiquitin binding GO:0043130
Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation.
4 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) P46934 (/IDA)
Ion channel binding GO:0044325
Interacting selectively and non-covalently with one or more specific sites on an ion channel, a protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.
4 H0VCR8 (/IPI) Q96PU5 (/IPI) Q96PU5 (/IPI) Q96PU5 (/IPI)
SMAD binding GO:0046332
Interacting selectively and non-covalently with a SMAD signaling protein.
4 F1M3F2 (/IPI) Q9HAU4 (/IPI) Q9HAU4 (/IPI) Q9HAU4 (/IPI)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
3 Q4QIR6 (/ISM) Q580G4 (/ISM) Q580G4 (/ISM)
Potassium channel regulator activity GO:0015459
Modulates potassium channel activity via direct interaction interaction with a potassium channel (binding or modification).
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Sodium channel regulator activity GO:0017080
Modulates the activity of a sodium channel.
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
3 Q8IYU2 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA)
Potassium channel inhibitor activity GO:0019870
Stops, prevents, or reduces the activity of a potassium channel.
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Phosphatidylinositol binding GO:0035091
Interacting selectively and non-covalently with any inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives.
3 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
3 Q9HAU4 (/IPI) Q9HAU4 (/IPI) Q9HAU4 (/IPI)
Rac GTPase binding GO:0048365
Interacting selectively and non-covalently with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases.
3 Q8IYU2 (/IPI) Q8IYU2 (/IPI) Q8IYU2 (/IPI)
Proline-rich region binding GO:0070064
Interacting selectively and non-covalently with a proline-rich region, i.e. a region that contains a high proportion of proline residues, in a protein.
3 P46934 (/IPI) P46935 (/IPI) P46935 (/IPI)
Phospholipid binding GO:0005543
Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.
2 O14326 (/ISM) Q92462 (/ISM)
Phospholipid binding GO:0005543
Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.
2 Q9HCE7 (/TAS) Q9HCE7 (/TAS)
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
2 P46935 (/ISO) P46935 (/ISO)
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
2 P46934 (/IPI) Q9VVI3 (/IPI)
Ionotropic glutamate receptor binding GO:0035255
Interacting selectively and non-covalently with an ionotropic glutamate receptor. Ionotropic glutamate receptors bind glutamate and exert an effect through the regulation of ion channels.
2 P46935 (/IDA) P46935 (/IDA)
Activin binding GO:0048185
Interacting selectively and non-covalently with activin, a dimer of inhibin-beta subunits.
2 Q9HCE7 (/NAS) Q9HCE7 (/NAS)
Phosphoserine residue binding GO:0050815
Interacting selectively and non-covalently with a phosphorylated serine residue within a protein.
2 P46935 (/IDA) P46935 (/IDA)
Phosphothreonine residue binding GO:0050816
Interacting selectively and non-covalently with a phosphorylated threonine residue within a protein.
2 P46935 (/IDA) P46935 (/IDA)
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
2 O13834 (/ISM) O14326 (/ISM)
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
2 D5SHR3 (/ISS) Q9W325 (/ISS)
I-SMAD binding GO:0070411
Interacting selectively and non-covalently with an inhibitory SMAD signaling protein.
2 Q9HCE7 (/IPI) Q9HCE7 (/IPI)
R-SMAD binding GO:0070412
Interacting selectively and non-covalently with a receptor-regulated SMAD signaling protein.
2 Q9HCE7 (/IPI) Q9HCE7 (/IPI)
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
1 P51593 (/IDA)
Notch binding GO:0005112
Interacting selectively and non-covalently with the Notch (N) protein, a surface receptor.
1 Q9VVI3 (/IPI)
Transforming growth factor beta receptor binding GO:0005160
Interacting selectively and non-covalently with the transforming growth factor beta receptor.
1 F1M3F2 (/IPI)
Transforming growth factor beta receptor binding GO:0005160
Interacting selectively and non-covalently with the transforming growth factor beta receptor.
1 A2A5Z6 (/ISO)
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
1 Q62940 (/IDA)
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
1 Q62940 (/IPI)
Potassium channel regulator activity GO:0015459
Modulates potassium channel activity via direct interaction interaction with a potassium channel (binding or modification).
1 Q8CFI0 (/ISO)
Myosin binding GO:0017022
Interacting selectively and non-covalently with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments.
1 Q9VVI3 (/IPI)
Sodium channel regulator activity GO:0017080
Modulates the activity of a sodium channel.
1 Q8CFI0 (/ISO)
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
1 Q3U0D9 (/ISO)
Potassium channel inhibitor activity GO:0019870
Stops, prevents, or reduces the activity of a potassium channel.
1 F1LRN8 (/IMP)
Potassium channel inhibitor activity GO:0019870
Stops, prevents, or reduces the activity of a potassium channel.
1 Q8CFI0 (/ISO)
Sodium channel inhibitor activity GO:0019871
Stops, prevents, or reduces the activity of a sodium channel.
1 Q8CFI0 (/ISO)
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
1 Q9VVI3 (/IDA)
Beta-2 adrenergic receptor binding GO:0031698
Interacting selectively and non-covalently with a beta-2 adrenergic receptor.
1 P46934 (/IDA)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
1 A2A5Z6 (/ISO)
Ion channel binding GO:0044325
Interacting selectively and non-covalently with one or more specific sites on an ion channel, a protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.
1 Q8CFI0 (/ISO)
SMAD binding GO:0046332
Interacting selectively and non-covalently with a SMAD signaling protein.
1 A2A5Z6 (/ISO)
Rac GTPase binding GO:0048365
Interacting selectively and non-covalently with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases.
1 Q3U0D9 (/ISO)
Phosphoserine residue binding GO:0050815
Interacting selectively and non-covalently with a phosphorylated serine residue within a protein.
1 P46934 (/ISS)
Phosphothreonine residue binding GO:0050816
Interacting selectively and non-covalently with a phosphorylated threonine residue within a protein.
1 P46934 (/ISS)
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
1 Q9CUN6 (/ISO)
RNA polymerase binding GO:0070063
Interacting selectively and non-covalently with an RNA polymerase molecule or complex.
1 P46934 (/IPI)
Proline-rich region binding GO:0070064
Interacting selectively and non-covalently with a proline-rich region, i.e. a region that contains a high proportion of proline residues, in a protein.
1 P46934 (/IMP)
I-SMAD binding GO:0070411
Interacting selectively and non-covalently with an inhibitory SMAD signaling protein.
1 Q9CUN6 (/ISO)
R-SMAD binding GO:0070412
Interacting selectively and non-covalently with a receptor-regulated SMAD signaling protein.
1 Q9CUN6 (/ISO)

There are 266 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
30 A1CQG2 (/ISS) A1D3C5 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) B0XQ72 (/ISS) B0XQ72 (/ISS)
(20 more)
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
20 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) P46934 (/IDA) P46935 (/IDA) P46935 (/IDA) Q03280 (/IDA) Q03280 (/IDA) Q5BDP1 (/IDA) Q8IYU2 (/IDA)
(10 more)
Protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway GO:0043328
The process of directing proteins towards the vacuole that contributes to protein catabolism via the multivesicular body (MVB) pathway.
16 A1CQG2 (/ISS) A1D3C5 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) A2QQ28 (/ISS) B0XQ72 (/ISS) B0XQ72 (/ISS)
(6 more)
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
15 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) P46934 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
(5 more)
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
11 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP) P46934 (/IMP) P46935 (/IMP) P46935 (/IMP) Q03280 (/IMP) Q03280 (/IMP) Q92462 (/IMP) Q9V853 (/IMP)
(1 more)
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
11 D3ZBM7 (/ISS) E1C656 (/ISS) F1N6G5 (/ISS) F8W2M1 (/ISS) Q28BK1 (/ISS) Q3U0D9 (/ISS) Q6DCL5 (/ISS) Q6DCL5 (/ISS) Q8IB94 (/ISS) Q9CUN6 (/ISS)
(1 more)
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
11 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP) Q5BDP1 (/IMP) Q96PU5 (/IMP) Q96PU5 (/IMP) Q96PU5 (/IMP) Q9CUN6 (/IMP) Q9V853 (/IMP) Q9V853 (/IMP)
(1 more)
Golgi organization GO:0007030
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.
8 D3ZBM7 (/ISS) E1C656 (/ISS) F1N6G5 (/ISS) F8W2M1 (/ISS) Q28BK1 (/ISS) Q3U0D9 (/ISS) Q6DCL5 (/ISS) Q6DCL5 (/ISS)
Regulation of cell migration GO:0030334
Any process that modulates the frequency, rate or extent of cell migration.
8 D3ZBM7 (/ISS) E1C656 (/ISS) F1N6G5 (/ISS) F8W2M1 (/ISS) Q28BK1 (/ISS) Q3U0D9 (/ISS) Q6DCL5 (/ISS) Q6DCL5 (/ISS)
Membrane fusion GO:0061025
The membrane organization process that joins two lipid bilayers to form a single membrane.
8 D3ZBM7 (/ISS) E1C656 (/ISS) F1N6G5 (/ISS) F8W2M1 (/ISS) Q28BK1 (/ISS) Q3U0D9 (/ISS) Q6DCL5 (/ISS) Q6DCL5 (/ISS)
Protein K48-linked ubiquitination GO:0070936
A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.
8 D3ZBM7 (/ISS) E1C656 (/ISS) F1N6G5 (/ISS) F8W2M1 (/ISS) Q28BK1 (/ISS) Q3U0D9 (/ISS) Q6DCL5 (/ISS) Q6DCL5 (/ISS)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
6 Q96PU5 (/TAS) Q96PU5 (/TAS) Q96PU5 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS)
Protein polyubiquitination GO:0000209
Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
6 Q96PU5 (/TAS) Q96PU5 (/TAS) Q96PU5 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS)
Protein monoubiquitination GO:0006513
Addition of a single ubiquitin group to a protein.
6 A0A0G2JUY1 (/IMP) A0A0G2JXP3 (/IMP) F1LRN8 (/IMP) P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Protein K48-linked ubiquitination GO:0070936
A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.
6 Q8IYU2 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Protein polyubiquitination GO:0000209
Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
5 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) Q9HCE7 (/IDA) Q9HCE7 (/IDA)
Protein monoubiquitination GO:0006513
Addition of a single ubiquitin group to a protein.
5 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) P46935 (/IDA) P46935 (/IDA)
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
5 P46935 (/ISO) P46935 (/ISO) Q3U0D9 (/ISO) Q8CFI0 (/ISO) Q9CUN6 (/ISO)
BMP signaling pathway GO:0030509
A series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
5 Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HCE7 (/TAS) Q9HCE7 (/TAS)
Negative regulation of transforming growth factor beta receptor signaling pathway GO:0030512
Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway.
5 Q9HAU4 (/IDA) Q9HAU4 (/IDA) Q9HAU4 (/IDA) Q9HCE7 (/IDA) Q9HCE7 (/IDA)
Ubiquitin-dependent SMAD protein catabolic process GO:0030579
The chemical reactions and pathways resulting in the breakdown of SMAD signaling proteins by ubiquitination and targeting to the proteasome.
5 Q9HAU4 (/IDA) Q9HAU4 (/IDA) Q9HAU4 (/IDA) Q9HCE7 (/IDA) Q9HCE7 (/IDA)
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
5 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA) Q9HCE7 (/IDA) Q9HCE7 (/IDA)
Positive regulation of receptor-mediated endocytosis GO:0048260
Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.
5 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP) Q9V853 (/IMP) Q9V853 (/IMP)
Wnt signaling pathway, planar cell polarity pathway GO:0060071
The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity.
5 Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HCE7 (/TAS) Q9HCE7 (/TAS)
Positive regulation of dendrite extension GO:1903861
Any process that activates or increases the frequency, rate or extent of dendrite extension.
5 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA) Q9HCE7 (/IDA) Q9HCE7 (/IDA)
Protein polyubiquitination GO:0000209
Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
4 C7G034 (/ISS) P51593 (/ISS) Q9CUN6 (/ISS) Q9PUN2 (/ISS)
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
4 A2A5Z6 (/ISO) Q3U0D9 (/ISO) Q8CFI0 (/ISO) Q9CUN6 (/ISO)
Negative regulation of sodium ion transport GO:0010766
Any process that decreases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
4 P46934 (/IDA) P46935 (/IDA) P46935 (/IDA) Q8CFI0 (/IDA)
Cellular response to UV GO:0034644
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.
4 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP) P46934 (/IMP)
Regulation of ion transmembrane transport GO:0034765
Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.
4 P46934 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Regulation of membrane potential GO:0042391
Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.
4 P46934 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway GO:0043162
The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the multivesicular body (MVB) sorting pathway; ubiquitin-tagged proteins are sorted into MVBs, and delivered to a lysosome/vacuole for degradation.
4 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP) P46934 (/IMP)
Positive regulation of endocytosis GO:0045807
Any process that activates or increases the frequency, rate or extent of endocytosis.
4 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP) Q9VVI3 (/IMP)
Regulation of potassium ion transmembrane transporter activity GO:1901016
Any process that modulates the frequency, rate or extent of potassium ion transmembrane transporter activity.
4 P46934 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Negative regulation of sodium ion transmembrane transporter activity GO:2000650
Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transporter activity.
4 P46934 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Protein polyubiquitination GO:0000209
Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of membrane depolarization GO:0003254
Any process that modulates the rate, frequency or extent of membrane depolarization. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive.
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Chromatin assembly or disassembly GO:0006333
The formation or destruction of chromatin structures.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Protein monoubiquitination GO:0006513
Addition of a single ubiquitin group to a protein.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Regulation of nitrogen utilization GO:0006808
Any process that modulates the frequency, rate or extent of nitrogen utilization.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Sodium ion transport GO:0006814
The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
3 Q96PU5 (/NAS) Q96PU5 (/NAS) Q96PU5 (/NAS)
Cellular sodium ion homeostasis GO:0006883
Any process involved in the maintenance of an internal steady state of sodium ions at the level of a cell.
3 Q96PU5 (/NAS) Q96PU5 (/NAS) Q96PU5 (/NAS)
Mitochondrion organization GO:0007005
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Mitochondrion organization GO:0007005
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Golgi organization GO:0007030
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.
3 Q8IYU2 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA)
Ectoderm development GO:0007398
The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation.
3 Q9HCE7 (/TAS) Q9HCE7 (/TAS) Q9PUN2 (/TAS)
Neuromuscular junction development GO:0007528
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction.
3 P46935 (/IMP) P46935 (/IMP) Q9VVI3 (/IMP)
Excretion GO:0007588
The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds.
3 Q96PU5 (/NAS) Q96PU5 (/NAS) Q96PU5 (/NAS)
Response to metal ion GO:0010038
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Regulation of mRNA export from nucleus GO:0010793
Any process that modulates the frequency, rate or extent of the directed movement of mRNA from the nucleus to the cytoplasm.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of mRNA export from nucleus GO:0010793
Any process that modulates the frequency, rate or extent of the directed movement of mRNA from the nucleus to the cytoplasm.
3 P39940 (/IPI) P39940 (/IPI) P39940 (/IPI)
Regulation of dolichol biosynthetic process GO:0010794
Any process that modulates the frequency, rate or extent of dolichol biosynthesis. Dolichol biosynthesis consists of the chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Regulation of dolichol biosynthetic process GO:0010794
Any process that modulates the frequency, rate or extent of dolichol biosynthesis. Dolichol biosynthesis consists of the chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of ubiquinone biosynthetic process GO:0010795
Any process that modulates the frequency, rate or extent of ubiquinone biosynthesis. Ubiquinone biosynthesis consists of the chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Regulation of ubiquinone biosynthetic process GO:0010795
Any process that modulates the frequency, rate or extent of ubiquinone biosynthesis. Ubiquinone biosynthesis consists of the chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of multivesicular body size GO:0010796
Any process that modulates the volume of a multivesicular body, a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
3 Q96PU5 (/NAS) Q96PU5 (/NAS) Q96PU5 (/NAS)
Protein deubiquitination GO:0016579
The removal of one or more ubiquitin groups from a protein.
3 Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS)
Rac protein signal transduction GO:0016601
A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state.
3 Q8IYU2 (/TAS) Q8IYU2 (/TAS) Q8IYU2 (/TAS)
Poly(A)+ mRNA export from nucleus GO:0016973
The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of transforming growth factor beta receptor signaling pathway GO:0017015
Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway.
3 Q9HAU4 (/NAS) Q9HAU4 (/NAS) Q9HAU4 (/NAS)
Viral life cycle GO:0019058
A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
3 Q96PU5 (/TAS) Q96PU5 (/TAS) Q96PU5 (/TAS)
Regulation of phosphate metabolic process GO:0019220
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving phosphates.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Water homeostasis GO:0030104
Any process involved in the maintenance of an internal steady state of water within an organism or cell.
3 Q96PU5 (/NAS) Q96PU5 (/NAS) Q96PU5 (/NAS)
Cell differentiation GO:0030154
The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
3 Q9HCE7 (/IDA) Q9HCE7 (/IDA) Q9PUN2 (/IDA)
Regulation of cell migration GO:0030334
Any process that modulates the frequency, rate or extent of cell migration.
3 Q8IYU2 (/IMP) Q8IYU2 (/IMP) Q8IYU2 (/IMP)
Negative regulation of transforming growth factor beta receptor signaling pathway GO:0030512
Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway.
3 Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS)
Negative regulation of BMP signaling pathway GO:0030514
Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.
3 Q9HCE7 (/TAS) Q9HCE7 (/TAS) Q9PUN2 (/TAS)
Regulation of initiation of mating projection growth GO:0031384
Any process that modulates the frequency, rate, or extent of the start of mating projection formation by unicellular fungi.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of protein stability GO:0031647
Any process that affects the structure and integrity of a protein, altering the likelihood of its degradation or aggregation.
3 Q96PU5 (/IMP) Q96PU5 (/IMP) Q96PU5 (/IMP)
Positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436
Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of ergosterol biosynthetic process GO:0032443
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Regulation of ergosterol biosynthetic process GO:0032443
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Late endosome to vacuole transport via multivesicular body sorting pathway GO:0032511
The directed movement of substances from endosomes to vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the vacuole.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Late endosome to vacuole transport via multivesicular body sorting pathway GO:0032511
The directed movement of substances from endosomes to vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the vacuole.
3 P39940 (/IPI) P39940 (/IPI) P39940 (/IPI)
Receptor catabolic process GO:0032801
The chemical reactions and pathways resulting in the breakdown of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
3 P46934 (/IDA) Q9HCE7 (/IDA) Q9HCE7 (/IDA)
Regulation of protein localization GO:0032880
Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of protein localization GO:0032880
Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location.
3 P39940 (/IPI) P39940 (/IPI) P39940 (/IPI)
Regulation of actin cytoskeleton organization GO:0032956
Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Ion transmembrane transport GO:0034220
A process in which an ion is transported across a membrane.
3 Q96PU5 (/TAS) Q96PU5 (/TAS) Q96PU5 (/TAS)
Ribophagy GO:0034517
The selective autophagy process in which cells degrade mature ribosomes under conditions of starvation.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Regulation of protein catabolic process GO:0042176
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
3 Q96PU5 (/NAS) Q96PU5 (/NAS) Q96PU5 (/NAS)
Response to drug GO:0042493
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Response to drug GO:0042493
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
3 P39940 (/IPI) P39940 (/IPI) P39940 (/IPI)
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
3 P39940 (/IPI) P39940 (/IPI) P39940 (/IPI)
Positive regulation of fatty acid biosynthetic process GO:0045723
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Positive regulation of protein catabolic process GO:0045732
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
3 P46934 (/IDA) P46935 (/IDA) P46935 (/IDA)
Positive regulation of protein catabolic process GO:0045732
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
3 A0A0G2JUY1 (/IMP) A0A0G2JXP3 (/IMP) F1LRN8 (/IMP)
Positive regulation of protein catabolic process GO:0045732
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
3 P46935 (/ISO) P46935 (/ISO) Q8CFI0 (/ISO)
Negative regulation of Notch signaling pathway GO:0045746
Any process that stops, prevents, or reduces the frequency, rate or extent of the Notch signaling pathway.
3 A0A0R4IDE6 (/IMP) Q3KRP0 (/IMP) Q9VVI3 (/IMP)
Positive regulation of endocytosis GO:0045807
Any process that activates or increases the frequency, rate or extent of endocytosis.
3 Q96PU5 (/NAS) Q96PU5 (/NAS) Q96PU5 (/NAS)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
3 Q9HAU4 (/NAS) Q9HAU4 (/NAS) Q9HAU4 (/NAS)
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Protein autoubiquitination GO:0051865
The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.
3 P39940 (/IGI) P39940 (/IGI) P39940 (/IGI)
Regulation of membrane repolarization GO:0060306
Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential, usually from positive to negative.
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Membrane fusion GO:0061025
The membrane organization process that joins two lipid bilayers to form a single membrane.
3 Q8IYU2 (/IMP) Q8IYU2 (/IMP) Q8IYU2 (/IMP)
Ubiquitin-dependent endocytosis GO:0070086
Endocytosis of a protein that requires the substrate to be modified by ubiquitination. Several plasma membrane proteins, including cell surface permeases and some receptors, are targeted for internalization by endocytosis, and are thereafter delivered to the vacuole or lysosome, where they are degraded.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Protein K63-linked ubiquitination GO:0070534
A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a protein. K63-linked ubiquitination does not target the substrate protein for degradation, but is involved in several pathways, notably as a signal to promote error-free DNA postreplication repair.
3 P46934 (/ISS) P46935 (/ISS) P46935 (/ISS)
Mitochondria-associated ubiquitin-dependent protein catabolic process GO:0072671
The chemical reactions and pathways resulting in the breakdown of proteins transported from mitochondria and targeted to cytoplasmic proteasomes for degradation as a response to oxidative stress conditions.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Ventricular cardiac muscle cell action potential GO:0086005
An action potential that occurs in a ventricular cardiac muscle cell.
3 Q96PU5 (/ISS) Q96PU5 (/ISS) Q96PU5 (/ISS)
Positive regulation of canonical Wnt signaling pathway GO:0090263
Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.
3 Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS)
Negative regulation of potassium ion transmembrane transporter activity GO:1901017
Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transporter activity.
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Positive regulation of trophoblast cell migration GO:1901165
Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.
3 Q9HAU4 (/IDA) Q9HAU4 (/IDA) Q9HAU4 (/IDA)
Negative regulation of potassium ion transmembrane transport GO:1901380
Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transport.
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Negative regulation of sodium ion transmembrane transport GO:1902306
Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transport.
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Negative regulation of protein localization to cell surface GO:2000009
Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to the cell surface.
3 Q96PU5 (/IDA) Q96PU5 (/IDA) Q96PU5 (/IDA)
Regulation of ribosomal large subunit export from nucleus GO:2000203
Any process that modulates the frequency, rate or extent of ribosomal large subunit export from nucleus.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of rRNA processing GO:2000232
Any process that modulates the frequency, rate or extent of rRNA processing.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of tRNA processing GO:2000235
Any process that modulates the frequency, rate or extent of tRNA processing.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Regulation of tRNA export from nucleus GO:2000238
Any process that modulates the frequency, rate or extent of tRNA export from nucleus.
3 P39940 (/IMP) P39940 (/IMP) P39940 (/IMP)
Positive regulation of caveolin-mediated endocytosis GO:2001288
Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.
3 Q96PU5 (/ISS) Q96PU5 (/ISS) Q96PU5 (/ISS)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
2 P46935 (/IMP) P46935 (/IMP)
Mitotic cell cycle GO:0000278
Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent.
2 Q03280 (/IMP) Q03280 (/IMP)
Endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000447
Endonucleolytic cleavage between the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2 Q03280 (/IMP) Q03280 (/IMP)
Cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000448
Endonucleolytic cleavage within ITS2 between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
2 Q03280 (/IMP) Q03280 (/IMP)
Endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000472
Endonucleolytic cleavage between the 5'-External Transcribed Spacer (5'-ETS) and the 5' end of the SSU-rRNA of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.
2 Q03280 (/IMP) Q03280 (/IMP)
Endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000480
Endonucleolytic cleavage within the 5'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. Endonucleolytic cleavage within the 5'-ETS of the pre-RNA is conserved as one of the early steps of rRNA processing in all eukaryotes, but the specific position of cleavage is variable.
2 Q03280 (/IMP) Q03280 (/IMP)
Embryonic development via the syncytial blastoderm GO:0001700
The process whose specific outcome is the progression of the embryo over time, from zygote formation through syncytial blastoderm to the hatching of the first instar larva. An example of this process is found in Drosophila melanogaster.
2 Q9V853 (/IMP) Q9V853 (/IMP)
Adaptive immune response GO:0002250
An immune response mediated by cells expressing specific receptors for antigen produced through a somatic diversification process, and allowing for an enhanced secondary response to subsequent exposures to the same antigen (immunological memory).
2 P46935 (/IMP) P46935 (/IMP)
Outflow tract morphogenesis GO:0003151
The process in which the anatomical structures of the outflow tract are generated and organized. The outflow tract is the portion of the heart through which blood flows into the arteries.
2 P46935 (/IGI) P46935 (/IGI)
Outflow tract morphogenesis GO:0003151
The process in which the anatomical structures of the outflow tract are generated and organized. The outflow tract is the portion of the heart through which blood flows into the arteries.
2 P46935 (/IMP) P46935 (/IMP)
Endocardial cushion development GO:0003197
The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.
2 P46935 (/IGI) P46935 (/IGI)
Endocardial cushion development GO:0003197
The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.
2 P46935 (/IMP) P46935 (/IMP)
Protein export from nucleus GO:0006611
The directed movement of a protein from the nucleus into the cytoplasm.
2 Q9HCE7 (/IDA) Q9HCE7 (/IDA)
Nucleocytoplasmic transport GO:0006913
The directed movement of molecules between the nucleus and the cytoplasm.
2 Q03280 (/IMP) Q03280 (/IMP)
Nucleus organization GO:0006997
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleus.
2 Q03280 (/IMP) Q03280 (/IMP)
Transforming growth factor beta receptor signaling pathway GO:0007179
A series of molecular signals initiated by the binding of an extracellular ligand to a transforming growth factor beta receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
2 Q9HCE7 (/TAS) Q9HCE7 (/TAS)
Germarium-derived egg chamber formation GO:0007293
Construction of a stage-1 egg chamber in the anterior part of the germarium, from the progeny of germ-line and somatic stem cells. An example of this is found in Drosophila melanogaster.
2 Q9V853 (/IGI) Q9V853 (/IGI)
Regulation of cell size GO:0008361
Any process that modulates the size of a cell.
2 Q03280 (/HMP) Q03280 (/HMP)
Negative regulation of sodium ion transport GO:0010766
Any process that decreases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
2 Q5U1Z5 (/IMP) Q8CFI0 (/IMP)
BMP signaling pathway GO:0030509
A series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
2 Q9HCE7 (/IDA) Q9HCE7 (/IDA)
BMP signaling pathway GO:0030509
A series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
2 Q9V853 (/IMP) Q9V853 (/IMP)
BMP signaling pathway GO:0030509
A series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
2 Q9CUN6 (/ISS) Q9PUN2 (/ISS)
Negative regulation of transforming growth factor beta receptor signaling pathway GO:0030512
Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway.
2 A2A5Z6 (/ISO) Q9CUN6 (/ISO)
Negative regulation of BMP signaling pathway GO:0030514
Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.
2 Q9HCE7 (/IDA) Q9HCE7 (/IDA)
Negative regulation of BMP signaling pathway GO:0030514
Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.
2 Q9V853 (/IGI) Q9V853 (/IGI)
Negative regulation of BMP signaling pathway GO:0030514
Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.
2 Q9V853 (/IMP) Q9V853 (/IMP)
Ubiquitin-dependent SMAD protein catabolic process GO:0030579
The chemical reactions and pathways resulting in the breakdown of SMAD signaling proteins by ubiquitination and targeting to the proteasome.
2 A2A5Z6 (/ISO) Q9CUN6 (/ISO)
Negative regulation of vascular endothelial growth factor receptor signaling pathway GO:0030948
Any process that stops, prevents, or reduces the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.
2 P46935 (/IDA) P46935 (/IDA)
Negative regulation of vascular endothelial growth factor receptor signaling pathway GO:0030948
Any process that stops, prevents, or reduces the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.
2 P46934 (/ISS) Q62940 (/ISS)
Protein localization to cell surface GO:0034394
A process in which a protein is transported to, or maintained in, a location within the external part of the cell wall and/or plasma membrane.
2 Q9HCE7 (/IDA) Q9HCE7 (/IDA)
Negative regulation of hippo signaling GO:0035331
Any process that stops, prevents, or reduces the frequency, rate or extent of hippo signaling.
2 Q9V853 (/IGI) Q9V853 (/IGI)
Regulation of growth GO:0040008
Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development.
2 Q9V853 (/IGI) Q9V853 (/IGI)
Regulation of growth GO:0040008
Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development.
2 Q9V853 (/IMP) Q9V853 (/IMP)
T cell activation GO:0042110
The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
2 P46935 (/IMP) P46935 (/IMP)
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
2 Q8CFI0 (/ISO) Q9CUN6 (/ISO)
Negative regulation of smoothened signaling pathway GO:0045879
Any process that stops, prevents, or reduces the frequency, rate or extent of smoothened signaling.
2 Q9V853 (/IMP) Q9V853 (/IMP)
Positive regulation of smoothened signaling pathway GO:0045880
Any process that activates or increases the frequency, rate or extent of smoothened signaling.
2 Q9V853 (/IMP) Q9V853 (/IMP)
Male gamete generation GO:0048232
Generation of the male gamete; specialised haploid cells produced by meiosis and along with a female gamete takes part in sexual reproduction.
2 Q9V853 (/IMP) Q9V853 (/IMP)
Blood vessel morphogenesis GO:0048514
The process in which the anatomical structures of blood vessels are generated and organized. The blood vessel is the vasculature carrying blood.
2 P46935 (/IGI) P46935 (/IGI)
Blood vessel morphogenesis GO:0048514
The process in which the anatomical structures of blood vessels are generated and organized. The blood vessel is the vasculature carrying blood.
2 P46935 (/IMP) P46935 (/IMP)
Embryonic hindgut morphogenesis GO:0048619
The process in which the anatomical structures of the hindgut are generated and organized, during the embryonic phase.
2 Q9V853 (/IMP) Q9V853 (/IMP)
Regulation of dendrite morphogenesis GO:0048814
Any process that modulates the frequency, rate or extent of dendrite morphogenesis.
2 P46935 (/IMP) P46935 (/IMP)
Regulation of dendrite morphogenesis GO:0048814
Any process that modulates the frequency, rate or extent of dendrite morphogenesis.
2 P46935 (/ISO) P46935 (/ISO)
Regulation of synapse organization GO:0050807
Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).
2 P46935 (/IMP) P46935 (/IMP)
Engulfment of target by autophagosome GO:0061736
The membrane invagination process by which an autophagosomal membrane surrounds an object that will be degraded by macroautophagy.
2 Q9HCE7 (/IMP) Q9HCE7 (/IMP)
Substrate localization to autophagosome GO:0061753
The localization process by which an autophagic substrate is delivered to a forming autophagosome.
2 Q9HCE7 (/IMP) Q9HCE7 (/IMP)
Protein K63-linked ubiquitination GO:0070534
A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a protein. K63-linked ubiquitination does not target the substrate protein for degradation, but is involved in several pathways, notably as a signal to promote error-free DNA postreplication repair.
2 P46935 (/ISO) P46935 (/ISO)
Protein modification by small protein conjugation or removal GO:0070647
A protein modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to or removed from a target protein.
2 O14326 (/IC) Q92462 (/IC)
Protein K48-linked ubiquitination GO:0070936
A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.
2 Q3U0D9 (/ISO) Q8CFI0 (/ISO)
Protein targeting to vacuole involved in autophagy GO:0071211
The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.
2 Q9HCE7 (/IMP) Q9HCE7 (/IMP)
Protein localization to plasma membrane GO:0072659
A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane.
2 Q9HCE7 (/TAS) Q9HCE7 (/TAS)
Endothelial to hematopoietic transition GO:0098508
The generation of hematopoietic stem cells from hemogenic endothelial cells by a process that includes tight-junction dissolution and loss of cell polarity followed by delamination from the endothelium.
2 A0A0R4IDE6 (/IGI) Q3KRP0 (/IGI)
Endothelial to hematopoietic transition GO:0098508
The generation of hematopoietic stem cells from hemogenic endothelial cells by a process that includes tight-junction dissolution and loss of cell polarity followed by delamination from the endothelium.
2 A0A0R4IDE6 (/IMP) Q3KRP0 (/IMP)
Regulation of postsynaptic neurotransmitter receptor internalization GO:0099149
Any process that modulates the frequency, rate or extent of endocytosis of neurotransmitter receptor at the postsynapse.
2 P46935 (/ISO) P46935 (/ISO)
Regulation of protein catabolic process at postsynapse, modulating synaptic transmission GO:0099576
Any process that modulates synaptic transmission by regulating a catabolic process occurring at a postsynapse.
2 P46935 (/ISO) P46935 (/ISO)
Positive regulation of dendrite extension GO:1903861
Any process that activates or increases the frequency, rate or extent of dendrite extension.
2 Q8CFI0 (/ISO) Q9CUN6 (/ISO)
Positive regulation of ubiquitin-dependent protein catabolic process GO:2000060
Any process that activates or increases the frequency, rate or extent of ubiquitin-dependent protein catabolic process.
2 Q9HCE7 (/IMP) Q9HCE7 (/IMP)
Protein polyubiquitination GO:0000209
Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
1 Q9CUN6 (/ISO)
Heart looping GO:0001947
The tube morphogenesis process in which the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceding their future integration. Heart looping begins with dextral-looping and ends when the main regional divisions of the mature heart and primordium of the great arterial trunks become established preceeding septation.
1 F8W2M1 (/IMP)
Positive regulation of receptor internalization GO:0002092
Any process that activates or increases the frequency, rate or extent of receptor internalization.
1 Q9VVI3 (/IMP)
Negative regulation of systemic arterial blood pressure GO:0003085
The process that reduces the force with which blood travels through the systemic arterial circulatory system.
1 Q8CFI0 (/IMP)
Atrioventricular valve formation GO:0003190
The developmental process pertaining to the initial formation of the atrioventricular valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.
1 F8W2M1 (/IMP)
Cardiac ventricle morphogenesis GO:0003208
The process in which the cardiac ventricle is generated and organized. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart.
1 F8W2M1 (/IMP)
Regulation of membrane depolarization GO:0003254
Any process that modulates the rate, frequency or extent of membrane depolarization. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive.
1 Q8CFI0 (/ISO)
Base-excision repair GO:0006284
In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.
1 P51593 (/ISS)
RRNA processing GO:0006364
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
1 O13834 (/ISO)
Cellular protein modification process GO:0006464
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
1 Q9PUN2 (/TAS)
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
1 O14326 (/IC)
Protein monoubiquitination GO:0006513
Addition of a single ubiquitin group to a protein.
1 Q8CFI0 (/ISO)
Protein monoubiquitination GO:0006513
Addition of a single ubiquitin group to a protein.
1 P51593 (/ISS)
Protein export from nucleus GO:0006611
The directed movement of a protein from the nucleus into the cytoplasm.
1 Q9CUN6 (/ISO)
Protein targeting to lysosome GO:0006622
The process of directing proteins towards the lysosome using signals contained within the protein.
1 P46934 (/IDA)
Immune response GO:0006955
Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
1 Q62940 (/IEP)
Golgi organization GO:0007030
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.
1 Q3U0D9 (/ISO)
Lysosomal transport GO:0007041
The directed movement of substances into, out of or within a lysosome.
1 P46934 (/IDA)
Axon guidance GO:0007411
The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.
1 Q9VVI3 (/IMP)
Imaginal disc-derived wing vein morphogenesis GO:0008586
The process in which anatomical structures of the veins on an imaginal disc-derived wing are generated and organized.
1 Q9VVI3 (/IMP)
Response to salt stress GO:0009651
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
1 Q8CFI0 (/IMP)
Response to metal ion GO:0010038
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
1 Q8CFI0 (/ISO)
Positive regulation of sodium ion transport GO:0010765
Any process that increases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
1 Q8CFI0 (/IGI)
Negative regulation of sodium ion transport GO:0010766
Any process that decreases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
1 Q8CFI0 (/ISO)
Negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage GO:0010768
Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a UV damage stimulus.
1 P46934 (/IMP)
Positive regulation of phosphatidylinositol 3-kinase signaling GO:0014068
Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphatidylinositol 3-kinase cascade.
1 P46934 (/IMP)
Response to denervation involved in regulation of muscle adaptation GO:0014894
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a denervation stimulus. This process occurs as part of the regulation of muscle adaptation.
1 Q62940 (/IEP)
Axon midline choice point recognition GO:0016199
The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline.
1 Q9VVI3 (/IMP)
Regulation of macroautophagy GO:0016241
Any process that modulates the frequency, rate or extent of macroautophagy.
1 P46934 (/TAS)
Histone ubiquitination GO:0016574
The modification of histones by addition of ubiquitin groups.
1 P51593 (/ISS)
Transmission of virus GO:0019089
The transfer of virions in order to create new infection.
1 P46934 (/IMP)
Cell differentiation GO:0030154
The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
1 Q9CUN6 (/ISO)
Cell differentiation GO:0030154
The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
1 Q9CUN6 (/ISS)
Negative regulation of ossification GO:0030279
Any process that stops, prevents, or reduces the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance.
1 Q9CUN6 (/IMP)
Regulation of cell migration GO:0030334
Any process that modulates the frequency, rate or extent of cell migration.
1 Q3U0D9 (/ISO)
BMP signaling pathway GO:0030509
A series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
1 Q9CUN6 (/ISO)
Negative regulation of BMP signaling pathway GO:0030514
Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.
1 Q9CUN6 (/ISO)
Neuron projection development GO:0031175
The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
1 P46934 (/IEP)
Positive regulation of protein ubiquitination GO:0031398
Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin groups to a protein.
1 P51593 (/ISS)
Receptor internalization GO:0031623
A receptor-mediated endocytosis process that results in the movement of receptors from the plasma membrane to the inside of the cell. The process begins when cell surface receptors are monoubiquitinated following ligand-induced activation. Receptors are subsequently taken up into endocytic vesicles from where they are either targeted to the lysosome or vacuole for degradation or recycled back to the plasma membrane.
1 P46934 (/IDA)
Receptor internalization GO:0031623
A receptor-mediated endocytosis process that results in the movement of receptors from the plasma membrane to the inside of the cell. The process begins when cell surface receptors are monoubiquitinated following ligand-induced activation. Receptors are subsequently taken up into endocytic vesicles from where they are either targeted to the lysosome or vacuole for degradation or recycled back to the plasma membrane.
1 Q9VVI3 (/IMP)
Receptor internalization GO:0031623
A receptor-mediated endocytosis process that results in the movement of receptors from the plasma membrane to the inside of the cell. The process begins when cell surface receptors are monoubiquitinated following ligand-induced activation. Receptors are subsequently taken up into endocytic vesicles from where they are either targeted to the lysosome or vacuole for degradation or recycled back to the plasma membrane.
1 Q9VVI3 (/IPI)
Regulation of protein stability GO:0031647
Any process that affects the structure and integrity of a protein, altering the likelihood of its degradation or aggregation.
1 Q8CFI0 (/ISO)
Regulation of protein stability GO:0031647
Any process that affects the structure and integrity of a protein, altering the likelihood of its degradation or aggregation.
1 Q8CFI0 (/ISS)
Receptor catabolic process GO:0032801
The chemical reactions and pathways resulting in the breakdown of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
1 Q9CUN6 (/ISO)
Circadian regulation of gene expression GO:0032922
Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.
1 P51593 (/ISS)
DsRNA transport GO:0033227
The directed movement of dsRNA, double-stranded ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
1 Q8T3L0 (/IMP)
Protein localization to Golgi apparatus GO:0034067
A process in which a protein is transported to, or maintained in, a location within the Golgi apparatus.
1 Q92462 (/IMP)
Protein localization to cell surface GO:0034394
A process in which a protein is transported to, or maintained in, a location within the external part of the cell wall and/or plasma membrane.
1 Q9CUN6 (/ISO)
Regulation of ion transmembrane transport GO:0034765
Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.
1 Q8CFI0 (/ISO)
Regulation of membrane potential GO:0042391
Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.
1 Q8CFI0 (/ISO)
Glucocorticoid receptor signaling pathway GO:0042921
Any series of molecular signals generated as a consequence of a glucocorticoid binding to its receptor.
1 P46934 (/IDA)
Protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway GO:0043328
The process of directing proteins towards the vacuole that contributes to protein catabolism via the multivesicular body (MVB) pathway.
1 Q5BDP1 (/IDA)
Development involved in symbiotic interaction GO:0044111
The progression of an organism from an initial condition to a later condition, occurring when the organism is in a symbiotic interaction.
1 P46934 (/IMP)
Negative regulation of Notch signaling pathway GO:0045746
Any process that stops, prevents, or reduces the frequency, rate or extent of the Notch signaling pathway.
1 Q9VVI3 (/IDA)
Negative regulation of Notch signaling pathway GO:0045746
Any process that stops, prevents, or reduces the frequency, rate or extent of the Notch signaling pathway.
1 Q9VVI3 (/IGI)
Negative regulation of smoothened signaling pathway GO:0045879
Any process that stops, prevents, or reduces the frequency, rate or extent of smoothened signaling.
1 Q9VVI3 (/IGI)
Positive regulation of nucleocytoplasmic transport GO:0046824
Any process that activates or increases the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.
1 P46934 (/IDA)
Regulation of dendrite morphogenesis GO:0048814
Any process that modulates the frequency, rate or extent of dendrite morphogenesis.
1 Q62940 (/IDA)
Regulation of dendrite morphogenesis GO:0048814
Any process that modulates the frequency, rate or extent of dendrite morphogenesis.
1 P46934 (/ISS)
Progesterone receptor signaling pathway GO:0050847
Any series of molecular signals generated as a consequence of a progesterone binding to its receptor.
1 P46934 (/IDA)
Regulation of intracellular pH GO:0051453
Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion.
1 Q92462 (/IGI)
Response to calcium ion GO:0051592
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.
1 P46934 (/TAS)
Positive regulation of synapse assembly GO:0051965
Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.
1 Q9VVI3 (/IMP)
Regulation of membrane repolarization GO:0060306
Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential, usually from positive to negative.
1 Q8CFI0 (/ISO)
Membrane fusion GO:0061025
The membrane organization process that joins two lipid bilayers to form a single membrane.
1 Q3U0D9 (/ISO)
Parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization GO:0061734
A positive regulation of the macromitophagy pathway that is triggered by mitochondrial depolarization and requires the function of a parkin-family molecule.
1 Q9CUN6 (/IMP)
Engulfment of target by autophagosome GO:0061736
The membrane invagination process by which an autophagosomal membrane surrounds an object that will be degraded by macroautophagy.
1 Q9CUN6 (/ISO)
Substrate localization to autophagosome GO:0061753
The localization process by which an autophagic substrate is delivered to a forming autophagosome.
1 Q9CUN6 (/ISO)
Protein K63-linked ubiquitination GO:0070534
A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a protein. K63-linked ubiquitination does not target the substrate protein for degradation, but is involved in several pathways, notably as a signal to promote error-free DNA postreplication repair.
1 Q62940 (/IDA)
Protein targeting to vacuole involved in autophagy GO:0071211
The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.
1 Q9CUN6 (/ISO)
Ventricular cardiac muscle cell action potential GO:0086005
An action potential that occurs in a ventricular cardiac muscle cell.
1 F1LRN8 (/IMP)
Ventricular cardiac muscle cell action potential GO:0086005
An action potential that occurs in a ventricular cardiac muscle cell.
1 Q8CFI0 (/ISO)
Regulation of postsynaptic neurotransmitter receptor internalization GO:0099149
Any process that modulates the frequency, rate or extent of endocytosis of neurotransmitter receptor at the postsynapse.
1 Q62940 (/IDA)
Regulation of postsynaptic neurotransmitter receptor internalization GO:0099149
Any process that modulates the frequency, rate or extent of endocytosis of neurotransmitter receptor at the postsynapse.
1 Q62940 (/IMP)
Regulation of protein catabolic process at postsynapse, modulating synaptic transmission GO:0099576
Any process that modulates synaptic transmission by regulating a catabolic process occurring at a postsynapse.
1 Q62940 (/IDA)
Regulation of protein catabolic process at postsynapse, modulating synaptic transmission GO:0099576
Any process that modulates synaptic transmission by regulating a catabolic process occurring at a postsynapse.
1 Q62940 (/IMP)
Protein localization by the NVT pathway GO:0120113
A pathway targeting soluble cytosolic proteins to the vacuole lumen. It uses a selective autophagy receptor protein Nbr1, which is an ortholog of mammalian NBR1, and is remotely related to S. cerevisiae Cvt pathway receptor protein Atg19. Similar to the Cvt pathway, the cargos transported by this pathway are hydrolases, which presumably contribute to the hydrolytic activities in the vacuole lumen. Different from the Cvt pathway, this pathway does not require the macroautophagy machinery, but instead relies on the ESCRT machinery for cargo sequestration. This pathway is observed in the fission yeast S. pombe.
1 Q92462 (/IMP)
Regulation of potassium ion transmembrane transporter activity GO:1901016
Any process that modulates the frequency, rate or extent of potassium ion transmembrane transporter activity.
1 Q8CFI0 (/ISO)
Negative regulation of potassium ion transmembrane transporter activity GO:1901017
Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transporter activity.
1 F1LRN8 (/IMP)
Negative regulation of potassium ion transmembrane transporter activity GO:1901017
Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transporter activity.
1 Q8CFI0 (/ISO)
Positive regulation of trophoblast cell migration GO:1901165
Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.
1 A2A5Z6 (/ISO)
Negative regulation of potassium ion transmembrane transport GO:1901380
Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transport.
1 Q8CFI0 (/ISO)
Negative regulation of sodium ion transmembrane transport GO:1902306
Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transport.
1 Q8CFI0 (/ISO)
Negative regulation of protein localization to plasma membrane GO:1903077
Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to plasma membrane.
1 Q92462 (/IMP)
Negative regulation of reactive oxygen species biosynthetic process GO:1903427
Any process that stops, prevents or reduces the frequency, rate or extent of reactive oxygen species biosynthetic process.
1 F8W2M1 (/IGI)
Negative regulation of reactive oxygen species biosynthetic process GO:1903427
Any process that stops, prevents or reduces the frequency, rate or extent of reactive oxygen species biosynthetic process.
1 F8W2M1 (/IMP)
Positive regulation of cardioblast proliferation GO:1905062
Any process that activates or increases the frequency, rate or extent of cardioblast proliferation.
1 Q9VVI3 (/IMP)
Positive regulation of cardiac myofibril assembly GO:1905306
Any process that activates or increases the frequency, rate or extent of cardiac myofibril assembly.
1 Q9VVI3 (/IMP)
Negative regulation of uracil import across plasma membrane GO:1905530
Any process that stops, prevents or reduces the frequency, rate or extent of uracil import across plasma membrane.
1 Q92462 (/IMP)
Negative regulation of leucine import across plasma membrane GO:1905533
Any process that stops, prevents or reduces the frequency, rate or extent of leucine import across plasma membrane.
1 Q92462 (/IMP)
Negative regulation of protein localization to cell surface GO:2000009
Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to the cell surface.
1 Q8CFI0 (/ISO)
Positive regulation of ubiquitin-dependent protein catabolic process GO:2000060
Any process that activates or increases the frequency, rate or extent of ubiquitin-dependent protein catabolic process.
1 Q9CUN6 (/ISO)
Negative regulation of sodium ion transmembrane transporter activity GO:2000650
Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transporter activity.
1 Q8CFI0 (/ISO)
Regulation of bicellular tight junction assembly GO:2000810
Any process that modulates the frequency, rate or extent of tight junction assembly.
1 Q8CFI0 (/IDA)
Positive regulation of cation channel activity GO:2001259
Any process that activates or increases the frequency, rate or extent of cation channel activity.
1 Q8CFI0 (/IGI)
Positive regulation of caveolin-mediated endocytosis GO:2001288
Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.
1 F1LRN8 (/IMP)
Positive regulation of caveolin-mediated endocytosis GO:2001288
Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.
1 Q8CFI0 (/ISO)

There are 59 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
11 A2A5Z6 (/TAS) P46934 (/TAS) Q96PU5 (/TAS) Q96PU5 (/TAS) Q96PU5 (/TAS) Q9CUN6 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HCE7 (/TAS)
(1 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
10 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) P46934 (/IDA) P46935 (/IDA) P46935 (/IDA) Q92462 (/IDA) Q9HCE7 (/IDA) Q9HCE7 (/IDA) Q9VVI3 (/IDA)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
8 D3ZBM7 (/ISS) E1C656 (/ISS) F1N6G5 (/ISS) F8W2M1 (/ISS) Q28BK1 (/ISS) Q3U0D9 (/ISS) Q6DCL5 (/ISS) Q6DCL5 (/ISS)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
8 Q96PU5 (/TAS) Q96PU5 (/TAS) Q96PU5 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HAU4 (/TAS) Q9HCE7 (/TAS) Q9HCE7 (/TAS)
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
6 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) Q9HAU4 (/IDA) Q9HAU4 (/IDA) Q9HAU4 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
6 P46935 (/IDA) P46935 (/IDA) Q8GY23 (/IDA) Q8H0T4 (/IDA) Q9V853 (/IDA) Q9V853 (/IDA)
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
6 J3QQM4 (/IDA) J3QQM4 (/IDA) J3QQM4 (/IDA) Q9HAU4 (/IDA) Q9HAU4 (/IDA) Q9HAU4 (/IDA)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
6 P46934 (/HDA) Q96PU5 (/HDA) Q96PU5 (/HDA) Q96PU5 (/HDA) Q9HCE7 (/HDA) Q9HCE7 (/HDA)
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
5 P39940 (/IPI) P39940 (/IPI) P39940 (/IPI) P46935 (/IPI) P46935 (/IPI)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
5 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) P51593 (/IDA) Q8H0T4 (/IDA)
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
4 P46934 (/ISS) Q8GY23 (/ISS) Q9V853 (/ISS) Q9V853 (/ISS)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
4 P51593 (/ISS) Q8T3L0 (/ISS) Q9CUN6 (/ISS) Q9PUN2 (/ISS)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
4 H0YBH3 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
4 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA) P46934 (/IDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
4 P46934 (/IDA) Q9HCE7 (/IDA) Q9HCE7 (/IDA) Q9VVI3 (/IDA)
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
4 H0YBH3 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
3 Q8IYU2 (/IDA) Q8IYU2 (/IDA) Q8IYU2 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
3 O13834 (/HDA) Q03280 (/HDA) Q03280 (/HDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
3 Q9HAU4 (/NAS) Q9HAU4 (/NAS) Q9HAU4 (/NAS)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
3 P39940 (/HDA) P39940 (/HDA) P39940 (/HDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
3 P39940 (/HDA) P39940 (/HDA) P39940 (/HDA)
Cellular bud tip GO:0005934
The end of a cellular bud distal to the site of attachment to the mother cell.
3 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA)
Endosome membrane GO:0010008
The lipid bilayer surrounding an endosome.
3 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
3 P46935 (/IDA) P46935 (/IDA) Q8GY23 (/IDA)
Extrinsic component of cytoplasmic side of plasma membrane GO:0031234
The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region.
3 P39940 (/IDA) P39940 (/IDA) P39940 (/IDA)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
3 P46935 (/IDA) P46935 (/IDA) Q62940 (/IDA)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
3 P46935 (/IMP) P46935 (/IMP) Q62940 (/IMP)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
2 Q03280 (/HDA) Q03280 (/HDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
2 Q8GY23 (/IDA) Q8H0T4 (/IDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
2 Q580G4 (/ISM) Q580G4 (/ISM)
Microvillus GO:0005902
Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells.
2 P46935 (/ISO) P46935 (/ISO)
Axon GO:0030424
The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
2 A0A0G2K612 (/IDA) D3ZCF5 (/IDA)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
2 A0A0G2K612 (/IDA) D3ZCF5 (/IDA)
Dendritic spine GO:0043197
A small, membranous protrusion from a dendrite that forms a postsynaptic compartment - typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable including \thin\, \stubby\, \mushroom\, and \branched\, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity.
2 P46935 (/IDA) P46935 (/IDA)
Membrane raft GO:0045121
Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
2 P46935 (/ISO) P46935 (/ISO)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
2 P46935 (/ISO) P46935 (/ISO)
Postsynaptic cytosol GO:0099524
The region of the cytosol consisting of all cytosol that is part of the postsynapse.
2 P46935 (/IDA) P46935 (/IDA)
Postsynaptic cytosol GO:0099524
The region of the cytosol consisting of all cytosol that is part of the postsynapse.
2 P46935 (/IMP) P46935 (/IMP)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
1 Q3U0D9 (/ISO)
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
1 A2A5Z6 (/ISO)
Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
1 P46934 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q8T3L0 (/ISS)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q9CUN6 (/ISO)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
1 Q3U0D9 (/ISO)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
1 Q92462 (/HDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 P46934 (/ISS)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
1 P46934 (/IMP)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
1 Q9CUN6 (/ISO)
Microvillus GO:0005902
Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells.
1 Q62940 (/IDA)
Cell cortex GO:0005938
The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
1 P46934 (/IDA)
Plasmodesma GO:0009506
A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.
1 Q8GY23 (/IDA)
Apicolateral plasma membrane GO:0016327
The apical end of the lateral plasma membrane of epithelial cells.
1 P46934 (/TAS)
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
1 Q3U0D9 (/ISO)
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
1 A2A5Z6 (/ISO)
Axon GO:0030424
The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
1 Q9CUN6 (/ISO)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
1 Q9CUN6 (/ISO)
Membrane raft GO:0045121
Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
1 Q62940 (/IDA)
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
1 P46934 (/IDA)
Cell periphery GO:0071944
The part of a cell encompassing the cell cortex, the plasma membrane, and any external encapsulating structures.
1 Q92462 (/IDA)
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