The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Classic Zinc Finger
".
FunFam 653: Zinc finger protein Pegasus
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 10 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
17 |
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
(7 more) |
|
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
17 |
Q9H5V7 (/ISA)
Q9H5V7 (/ISA)
Q9H5V7 (/ISA)
Q9H5V7 (/ISA)
Q9H5V7 (/ISA)
Q9H5V7 (/ISA)
Q9H5V7 (/ISA)
Q9H5V7 (/ISA)
Q9H5V7 (/ISA)
Q9H5V7 (/ISA)
(7 more) |
|
DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to repress or decrease transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
17 |
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
(7 more) |
|
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
17 |
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
(7 more) |
|
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
17 |
Q9H5V7 (/IPI)
Q9H5V7 (/IPI)
Q9H5V7 (/IPI)
Q9H5V7 (/IPI)
Q9H5V7 (/IPI)
Q9H5V7 (/IPI)
Q9H5V7 (/IPI)
Q9H5V7 (/IPI)
Q9H5V7 (/IPI)
Q9H5V7 (/IPI)
(7 more) |
|
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
1 | Q8BU00 (/ISO) |
|
DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to repress or decrease transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
1 | Q8BU00 (/ISO) |
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
1 | Q7JM79 (/ISS) |
|
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | Q8BU00 (/ISO) |
|
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
1 | Q8BU00 (/ISO) |
There are 9 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
17 |
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
Q9H5V7 (/IDA)
(7 more) |
|
Protein heterooligomerization GO:0051291
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers that are not all identical. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
|
17 |
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
(7 more) |
|
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
1 | Q8BU00 (/ISO) |
|
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q7JM79 (/TAS) |
|
Regulation of cell migration GO:0030334
Any process that modulates the frequency, rate or extent of cell migration.
|
1 | Q7JM79 (/IMP) |
|
Positive regulation by host of viral release from host cell GO:0044791
A process in which a host organism activates or increases the frequency, rate or extent of the release of a virus with which it is infected, from its cells.
|
1 | Q60916 (/ISO) |
|
Positive regulation by host of viral process GO:0044794
A process in which a host organism activates or increases the frequency, rate or extent of the release of a process being mediated by a virus with which it is infected.
|
1 | Q60916 (/ISO) |
|
Regulation of neuron differentiation GO:0045664
Any process that modulates the frequency, rate or extent of neuron differentiation.
|
1 | Q7JM79 (/IMP) |
|
Protein heterooligomerization GO:0051291
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers that are not all identical. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
|
1 | Q8BU00 (/ISO) |
There are 6 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
17 |
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
Q9H5V7 (/IMP)
(7 more) |
|
Fibrillar center GO:0001650
A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
|
1 | A0A087X055 (/IDA) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q7JM79 (/IDA) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q60916 (/ISO) |
|
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
1 | A0A087X055 (/IDA) |
|
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
1 | Q8BU00 (/ISO) |
