The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Classic Zinc Finger
".
FunFam 43: Scratch family zinc finger 2
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 30 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
32 |
G5ECN8 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(22 more) |
DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to repress or decrease transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
32 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(22 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
27 |
G5ECN8 (/IPI)
O43623 (/IPI)
O43623 (/IPI)
O43623 (/IPI)
O43623 (/IPI)
O43623 (/IPI)
O43623 (/IPI)
O43623 (/IPI)
O43623 (/IPI)
O43623 (/IPI)
(17 more) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
27 |
G5ECN8 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(17 more) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
26 |
O43623 (/ISA)
O43623 (/ISA)
O43623 (/ISA)
O43623 (/ISA)
O43623 (/ISA)
O43623 (/ISA)
O43623 (/ISA)
O43623 (/ISA)
O43623 (/ISA)
O43623 (/ISA)
(16 more) |
E-box binding GO:0070888
Interacting selectively and non-covalently with an E-box, a DNA motif with the consensus sequence CANNTG that is found in the promoters of a wide array of genes expressed in neurons, muscle and other tissues.
|
20 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(10 more) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
19 |
O43623 (/NAS)
O43623 (/NAS)
O43623 (/NAS)
O43623 (/NAS)
O43623 (/NAS)
O43623 (/NAS)
O43623 (/NAS)
O43623 (/NAS)
O43623 (/NAS)
O43623 (/NAS)
(9 more) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
6 | Q91051 (/NAS) Q9BWW7 (/NAS) Q9BWW7 (/NAS) Q9BWW7 (/NAS) Q9BWW7 (/NAS) Q9BWW7 (/NAS) |
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
5 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) Q99M85 (/ISO) |
DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to repress or decrease transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
5 | Q9BWW7 (/IC) Q9BWW7 (/IC) Q9BWW7 (/IC) Q9BWW7 (/IC) Q9BWW7 (/IC) |
DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to repress or decrease transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
5 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) Q99M85 (/ISO) |
DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to repress or decrease transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
4 | P25932 (/IGI) P25932 (/IGI) P97469 (/IGI) P97469 (/IGI) |
E-box binding GO:0070888
Interacting selectively and non-covalently with an E-box, a DNA motif with the consensus sequence CANNTG that is found in the promoters of a wide array of genes expressed in neurons, muscle and other tissues.
|
4 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
3 | P97469 (/IDA) P97469 (/IDA) Q9QY31 (/IDA) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
3 | P08044 (/IDA) P25932 (/IDA) P25932 (/IDA) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
3 | Q8SXL3 (/ISS) Q9U7P8 (/ISS) Q9VJP2 (/ISS) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
3 | P97469 (/ISO) P97469 (/ISO) Q99M85 (/ISO) |
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
2 | Q29R14 (/ISS) Q9NQ03 (/ISS) |
DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to repress or decrease transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
2 | Q29R14 (/ISS) Q9NQ03 (/ISS) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
2 | P97469 (/IDA) P97469 (/IDA) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
2 | A0A1D5PVG0 (/IPI) Q91051 (/IPI) |
Kinase binding GO:0019900
Interacting selectively and non-covalently with a kinase, any enzyme that catalyzes the transfer of a phosphate group.
|
2 | Q02085 (/ISO) Q02085 (/ISO) |
Phosphoprotein binding GO:0051219
Interacting selectively and non-covalently with a phosphorylated protein.
|
2 | A0A1D5PVG0 (/IPI) Q91051 (/IPI) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
1 | Q9QY31 (/IDA) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
1 | Q9QY31 (/IDA) |
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | Q91051 (/NAS) |
Kinase binding GO:0019900
Interacting selectively and non-covalently with a kinase, any enzyme that catalyzes the transfer of a phosphate group.
|
1 | O95863 (/IPI) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
1 | P08044 (/IDA) |
Repressing transcription factor binding GO:0070491
Interacting selectively and non-covalently with a transcription repressor, any protein whose activity is required to prevent or downregulate transcription.
|
1 | P08044 (/IPI) |
E-box binding GO:0070888
Interacting selectively and non-covalently with an E-box, a DNA motif with the consensus sequence CANNTG that is found in the promoters of a wide array of genes expressed in neurons, muscle and other tissues.
|
1 | Q9NQ03 (/ISS) |
There are 168 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
35 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(25 more) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
27 |
G5ECN8 (/IMP)
O08954 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(17 more) |
Epithelial to mesenchymal transition GO:0001837
A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
|
22 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(12 more) |
Positive regulation of cell migration GO:0030335
Any process that activates or increases the frequency, rate or extent of cell migration.
|
21 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(11 more) |
Sensory perception of sound GO:0007605
The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound.
|
20 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(10 more) |
Desmosome disassembly GO:0035921
The controlled breakdown of a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.
|
20 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(10 more) |
Pigmentation GO:0043473
The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells.
|
20 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(10 more) |
Osteoblast differentiation GO:0001649
The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone.
|
19 |
O43623 (/IEP)
O43623 (/IEP)
O43623 (/IEP)
O43623 (/IEP)
O43623 (/IEP)
O43623 (/IEP)
O43623 (/IEP)
O43623 (/IEP)
O43623 (/IEP)
O43623 (/IEP)
(9 more) |
Aortic valve morphogenesis GO:0003180
The process in which the structure of the aortic valve is generated and organized.
|
19 |
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
(9 more) |
Epithelial to mesenchymal transition involved in endocardial cushion formation GO:0003198
A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the endocardial cushion.
|
19 |
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
(9 more) |
Epithelial to mesenchymal transition involved in endocardial cushion formation GO:0003198
A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the endocardial cushion.
|
19 |
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
(9 more) |
Negative regulation of vitamin D biosynthetic process GO:0010957
Any process that decreases the rate, frequency or extent of a vitamin D biosynthetic process. Vitamin D biosynthesis is the chemical reactions and pathways resulting in the formation of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).
|
19 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(9 more) |
Negative regulation of DNA damage response, signal transduction by p53 class mediator GO:0043518
Any process that stops, prevents, or reduces the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.
|
19 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(9 more) |
Notch signaling involved in heart development GO:0061314
The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the progression of the heart over time.
|
19 |
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
(9 more) |
Negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage GO:1902230
Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.
|
19 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(9 more) |
Regulation of bicellular tight junction assembly GO:2000810
Any process that modulates the frequency, rate or extent of tight junction assembly.
|
19 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(9 more) |
Cell migration involved in endocardial cushion formation GO:0003273
The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.
|
18 |
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
(8 more) |
Notch signaling pathway GO:0007219
A series of molecular signals initiated by the binding of an extracellular ligand to the receptor Notch on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
|
18 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(8 more) |
Negative regulation of keratinocyte proliferation GO:0010839
Any process that decreases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.
|
18 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(8 more) |
Neural crest cell development GO:0014032
The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.
|
18 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(8 more) |
Negative regulation of chondrocyte differentiation GO:0032331
Any process that stops, prevents, or reduces the frequency, rate or extent of chondrocyte differentiation.
|
18 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(8 more) |
Regulation of chemokine production GO:0032642
Any process that modulates the frequency, rate, or extent of chemokine production.
|
18 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(8 more) |
Negative regulation of cell adhesion mediated by integrin GO:0033629
Any process that stops, prevents, or reduces the frequency, rate, or extent of cell adhesion mediated by integrin.
|
18 |
O43623 (/IC)
O43623 (/IC)
O43623 (/IC)
O43623 (/IC)
O43623 (/IC)
O43623 (/IC)
O43623 (/IC)
O43623 (/IC)
O43623 (/IC)
O43623 (/IC)
(8 more) |
Regulation of osteoblast differentiation GO:0045667
Any process that modulates the frequency, rate or extent of osteoblast differentiation.
|
18 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(8 more) |
Epithelium development GO:0060429
The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.
|
18 |
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
(8 more) |
Negative regulation of vitamin D receptor signaling pathway GO:0070563
Any process that stops, prevents, or reduces the frequency, rate or extent of the vitamin D receptor signaling pathway activity.
|
18 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(8 more) |
Cellular response to epidermal growth factor stimulus GO:0071364
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epidermal growth factor stimulus.
|
18 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(8 more) |
Negative regulation of canonical Wnt signaling pathway GO:0090090
Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.
|
18 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(8 more) |
Negative regulation of canonical Wnt signaling pathway GO:0090090
Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.
|
18 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(8 more) |
Negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter GO:1900387
A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cell-cell adhesion.
|
18 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(8 more) |
Negative regulation of anoikis GO:2000811
Any process that stops, prevents or reduces the frequency, rate or extent of anoikis.
|
18 |
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
O43623 (/IMP)
(8 more) |
Negative regulation of extrinsic apoptotic signaling pathway in absence of ligand GO:2001240
Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.
|
18 |
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
O43623 (/ISS)
(8 more) |
Central nervous system development GO:0007417
The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
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6 | P08044 (/IMP) P25932 (/IMP) P25932 (/IMP) Q8SXL3 (/IMP) Q9U7P8 (/IMP) Q9VJP2 (/IMP) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
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6 | P08044 (/IMP) P25932 (/IMP) P25932 (/IMP) Q8SXL3 (/IMP) Q9U7P8 (/IMP) Q9VJP2 (/IMP) |
Asymmetric neuroblast division GO:0055059
The process resulting in the physical partitioning and separation of a neuroblast into two daughter cells with different developmental potentials.
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6 | P08044 (/IGI) P25932 (/IGI) P25932 (/IGI) Q8SXL3 (/IGI) Q9U7P8 (/IGI) Q9VJP2 (/IGI) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
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5 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) Q99M85 (/ISO) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
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5 | Q9BWW7 (/TAS) Q9BWW7 (/TAS) Q9BWW7 (/TAS) Q9BWW7 (/TAS) Q9BWW7 (/TAS) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
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5 | P19382 (/IDA) P25932 (/IDA) P25932 (/IDA) Q02085 (/IDA) Q02085 (/IDA) |
Epithelial to mesenchymal transition GO:0001837
A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
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4 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) |
Negative regulation of vitamin D biosynthetic process GO:0010957
Any process that decreases the rate, frequency or extent of a vitamin D biosynthetic process. Vitamin D biosynthesis is the chemical reactions and pathways resulting in the formation of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).
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4 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) |
Cell migration GO:0016477
The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. Cell migration is a central process in the development and maintenance of multicellular organisms.
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4 | P97469 (/IGI) P97469 (/IGI) Q02085 (/IGI) Q02085 (/IGI) |
Positive regulation of cell migration GO:0030335
Any process that activates or increases the frequency, rate or extent of cell migration.
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4 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) |
Negative regulation of DNA damage response, signal transduction by p53 class mediator GO:0043518
Any process that stops, prevents, or reduces the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.
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4 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
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4 | O95863 (/IMP) P08044 (/IMP) P25932 (/IMP) P25932 (/IMP) |
Roof of mouth development GO:0060021
The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
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4 | P97469 (/IGI) P97469 (/IGI) Q02085 (/IGI) Q02085 (/IGI) |
Cartilage morphogenesis GO:0060536
The process in which the anatomical structures of cartilage are generated and organized.
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4 | P97469 (/IGI) P97469 (/IGI) Q02085 (/IGI) Q02085 (/IGI) |
Negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage GO:1902230
Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.
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4 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) |
Regulation of neural precursor cell proliferation GO:2000177
Any process that modulates the frequency, rate or extent of neural precursor cell proliferation.
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4 | P08044 (/IMP) P25932 (/IMP) P25932 (/IMP) Q9VJP2 (/IMP) |
Regulation of bicellular tight junction assembly GO:2000810
Any process that modulates the frequency, rate or extent of tight junction assembly.
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4 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
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3 | O95863 (/ISS) Q29R14 (/ISS) Q9NQ03 (/ISS) |
Epithelial to mesenchymal transition GO:0001837
A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
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3 | O95863 (/IDA) Q02085 (/IDA) Q02085 (/IDA) |
Ventral cord development GO:0007419
The process whose specific outcome is the progression of the ventral cord over time, from its formation to the mature structure. The ventral cord is one of the distinguishing traits of the central nervous system of all arthropods (such as insects, crustaceans and arachnids) as well as many other invertebrates, such as the annelid worms.
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3 | Q8SXL3 (/HMP) Q9U7P8 (/HMP) Q9VJP2 (/HMP) |
Brain development GO:0007420
The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
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3 | Q8SXL3 (/IMP) Q9U7P8 (/IMP) Q9VJP2 (/IMP) |
Positive regulation of epithelial to mesenchymal transition GO:0010718
Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
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3 | O95863 (/IMP) Q02085 (/IMP) Q02085 (/IMP) |
Neural crest formation GO:0014029
The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes.
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3 | P19382 (/TAS) Q91924 (/TAS) Q91924 (/TAS) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
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3 | P08044 (/IDA) Q02085 (/IDA) Q02085 (/IDA) |
Regulation of neural precursor cell proliferation GO:2000177
Any process that modulates the frequency, rate or extent of neural precursor cell proliferation.
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3 | A4IGB7 (/IGI) Q6YI50 (/IGI) Q9VJP2 (/IGI) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
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2 | P25932 (/IGI) P25932 (/IGI) |
Mesoderm formation GO:0001707
The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts.
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2 | Q02085 (/IMP) Q02085 (/IMP) |
Cell fate specification GO:0001708
The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.
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2 | P25932 (/IMP) P25932 (/IMP) |
Cell fate determination GO:0001709
A process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.
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2 | P25932 (/IMP) P25932 (/IMP) |
Neural crest cell migration GO:0001755
The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo.
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2 | Q91924 (/IDA) Q91924 (/IDA) |
Epithelial to mesenchymal transition GO:0001837
A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
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2 | A0A0G2JZU3 (/TAS) Q6AY35 (/TAS) |
Epithelial to mesenchymal transition involved in endocardial cushion formation GO:0003198
A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the endocardial cushion.
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2 | Q02085 (/IGI) Q02085 (/IGI) |
Epithelial to mesenchymal transition involved in endocardial cushion formation GO:0003198
A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the endocardial cushion.
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2 | P97469 (/IMP) P97469 (/IMP) |
Cardiac muscle progenitor cell migration to the midline involved in heart field formation GO:0003261
The orderly movement of a myocardial progenitor cell toward the midline to form the heart field. Cardiac muscle progenitor cells are non-terminally differentiated, mesoderm-derived cells that are committed to differentiate into myocardial cells of the heart.
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2 | B3DH44 (/IMP) Q90414 (/IMP) |
Cell migration involved in endocardial cushion formation GO:0003273
The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.
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2 | P97469 (/IMP) P97469 (/IMP) |
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
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2 | Q02085 (/IGI) Q02085 (/IGI) |
Negative regulation of cell adhesion involved in substrate-bound cell migration GO:0006933
The disassembly of adhesions at the front and rear of a migrating cell. At the leading edge, adhesion disassembly accompanies the formation of new protrusions; at the cell rear, it promotes tail retraction.
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2 | P97469 (/IMP) P97469 (/IMP) |
Notch signaling pathway GO:0007219
A series of molecular signals initiated by the binding of an extracellular ligand to the receptor Notch on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
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2 | P97469 (/ISO) P97469 (/ISO) |
Notch signaling pathway GO:0007219
A series of molecular signals initiated by the binding of an extracellular ligand to the receptor Notch on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
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2 | P97469 (/ISS) P97469 (/ISS) |
Central nervous system development GO:0007417
The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
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2 | P25932 (/IGI) P25932 (/IGI) |
Open tracheal system development GO:0007424
The process whose specific outcome is the progression of an open tracheal system over time, from its formation to the mature structure. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles. An example of this is found in Drosophila melanogaster.
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2 | P25932 (/IMP) P25932 (/IMP) |
Epithelial cell migration, open tracheal system GO:0007427
The orderly movement of epithelial cells during development of an open tracheal system. An example of this is found in Drosophila melanogaster.
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2 | P25932 (/IMP) P25932 (/IMP) |
Maintenance of imaginal histoblast diploidy GO:0007489
The negative regulation of the differentiation of polytenized larval hypodermal cells from abdominal histoblasts. The abdominal histoblasts remain a small cluster of diploid cells among the polytenized larval hypodermal cells.
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2 | P25932 (/IMP) P25932 (/IMP) |
Mesoderm development GO:0007498
The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue.
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2 | Q02085 (/IMP) Q02085 (/IMP) |
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
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2 | B3DH44 (/IMP) Q90414 (/IMP) |
Sensory perception of sound GO:0007605
The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound.
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2 | P97469 (/ISO) P97469 (/ISO) |
Mesodermal cell migration GO:0008078
The orderly movement of mesodermal cells from one site to another.
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2 | B3DH44 (/IMP) Q90414 (/IMP) |
Response to radiation GO:0009314
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
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2 | P97469 (/IDA) P97469 (/IDA) |
Response to radiation GO:0009314
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
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2 | P97469 (/IMP) P97469 (/IMP) |
Positive regulation of epithelial to mesenchymal transition GO:0010718
Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
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2 | Q02085 (/ISO) Q02085 (/ISO) |
Negative regulation of keratinocyte proliferation GO:0010839
Any process that decreases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.
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2 | P97469 (/ISO) P97469 (/ISO) |
Neural crest cell development GO:0014032
The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.
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2 | P97469 (/ISO) P97469 (/ISO) |
Neural crest cell fate specification GO:0014036
The process in which a cell becomes capable of differentiating autonomously into a neural crest cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.
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2 | Q91924 (/IGI) Q91924 (/IGI) |
Negative regulation of cell-cell adhesion GO:0022408
Any process that stops, prevents or reduces the rate or extent of cell adhesion to another cell.
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2 | B3DH44 (/IMP) Q90414 (/IMP) |
Germ-line stem cell population maintenance GO:0030718
Any process by which an organism or tissue maintains a population of germ-line stem cells.
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2 | P25932 (/IMP) P25932 (/IMP) |
Hair follicle morphogenesis GO:0031069
The process in which the anatomical structures of the hair follicle are generated and organized.
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2 | Q02085 (/IDA) Q02085 (/IDA) |
Negative regulation of chondrocyte differentiation GO:0032331
Any process that stops, prevents, or reduces the frequency, rate or extent of chondrocyte differentiation.
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2 | P97469 (/ISO) P97469 (/ISO) |
Regulation of chemokine production GO:0032642
Any process that modulates the frequency, rate, or extent of chemokine production.
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2 | P97469 (/ISO) P97469 (/ISO) |
Negative regulation of DNA endoreduplication GO:0032876
Any process that stops, prevents, or reduces the frequency, rate or extent of DNA endoreduplication.
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2 | P25932 (/IMP) P25932 (/IMP) |
Somatic stem cell population maintenance GO:0035019
Any process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line.
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2 | P25932 (/IMP) P25932 (/IMP) |
Positive regulation of histone acetylation GO:0035066
Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to a histone protein.
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2 | P97469 (/IMP) P97469 (/IMP) |
Response to nicotine GO:0035094
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus.
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2 | P25932 (/IMP) P25932 (/IMP) |
Branch fusion, open tracheal system GO:0035147
Fusing of specific tracheal branches in an open tracheal system to branches from neighboring hemisegments to form a continuous tracheal network. Branch fusion is mediated by individual cells at the tip of each branch, which contact a similar cell and undergo a coordinated series of morphogenetic events that create a bicellular fusion joint.
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2 | P25932 (/IMP) P25932 (/IMP) |
Genital disc development GO:0035215
Progression of the genital imaginal disc over time, from its initial formation through to its metamorphosis to form the adult terminalia, comprising the entire set of internal and external genitalia and analia. Both sexes of Drosophila have a single genital disc formed from the female and male genital primordia, and the anal primordium. The anal primordium develops in both sexes, forming either male or female analia. However, only one of the genital primordia develops in each sex, forming either the male or the female genitalia.
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2 | P25932 (/IMP) P25932 (/IMP) |
Wing disc development GO:0035220
Progression of the wing disc over time, from its initial formation through to its metamorphosis to form adult structures including the wing hinge, wing blade and pleura.
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2 | P25932 (/IMP) P25932 (/IMP) |
Desmosome disassembly GO:0035921
The controlled breakdown of a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.
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2 | P97469 (/ISO) P97469 (/ISO) |
Cellular response to platelet-derived growth factor stimulus GO:0036120
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.
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2 | P97469 (/TAS) P97469 (/TAS) |
Intestinal stem cell homeostasis GO:0036335
Any biological process involved in the maintenance of the steady-state number of intestinal stem cells within a population of cells.
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2 | P25932 (/IMP) P25932 (/IMP) |
Cell migration involved in gastrulation GO:0042074
The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression).
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2 | B3DH44 (/IMP) Q90414 (/IMP) |
Gravitaxis GO:0042332
The directed movement of a motile cell or organism in response to gravity.
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2 | P25932 (/IMP) P25932 (/IMP) |
Regulation of apoptotic process GO:0042981
Any process that modulates the occurrence or rate of cell death by apoptotic process.
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2 | P97469 (/IC) P97469 (/IC) |
Negative regulation of apoptotic process GO:0043066
Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
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2 | P97469 (/IGI) P97469 (/IGI) |
Pigmentation GO:0043473
The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells.
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2 | P97469 (/ISO) P97469 (/ISO) |
Regulation of DNA damage response, signal transduction by p53 class mediator GO:0043516
Any process that modulates the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.
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2 | A4IGB7 (/IGI) Q6YI50 (/IGI) |
Regulation of neuron apoptotic process GO:0043523
Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons.
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2 | A4IGB7 (/IMP) Q6YI50 (/IMP) |
Wound healing, spreading of cells GO:0044319
The migration of a cell along or through a wound gap that contributes to the reestablishment of a continuous surface.
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2 | P97469 (/TAS) P97469 (/TAS) |
Positive regulation of fat cell differentiation GO:0045600
Any process that activates or increases the frequency, rate or extent of adipocyte differentiation.
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2 | P97469 (/IGI) P97469 (/IGI) |
Positive regulation of fat cell differentiation GO:0045600
Any process that activates or increases the frequency, rate or extent of adipocyte differentiation.
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2 | P97469 (/IMP) P97469 (/IMP) |
Regulation of osteoblast differentiation GO:0045667
Any process that modulates the frequency, rate or extent of osteoblast differentiation.
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2 | P97469 (/ISO) P97469 (/ISO) |
Negative regulation of cell cycle GO:0045786
Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle.
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2 | A0A0G2JZU3 (/TAS) Q6AY35 (/TAS) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
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2 | Q02085 (/ISO) Q02085 (/ISO) |
Regulation of compound eye pigmentation GO:0048076
Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.
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2 | P25932 (/IMP) P25932 (/IMP) |
Posterior lateral line neuromast primordium migration GO:0048920
The migration of a relatively undifferentiated cell along the developing posterior lateral line, originating from cranial ectodermal placodes situated behind the ear. The neuromast primordium deposits proneuromasts along the lateral line, from which the neuromasts will develop.
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2 | B3DH44 (/IGI) Q90414 (/IGI) |
Posterior lateral line neuromast primordium migration GO:0048920
The migration of a relatively undifferentiated cell along the developing posterior lateral line, originating from cranial ectodermal placodes situated behind the ear. The neuromast primordium deposits proneuromasts along the lateral line, from which the neuromasts will develop.
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2 | B3DH44 (/IMP) Q90414 (/IMP) |
White fat cell differentiation GO:0050872
The process in which a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole.
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2 | P97469 (/IMP) P97469 (/IMP) |
Roof of mouth development GO:0060021
The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
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2 | P97469 (/IMP) P97469 (/IMP) |
Epithelium development GO:0060429
The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.
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2 | P97469 (/IMP) P97469 (/IMP) |
Regulation of branching involved in salivary gland morphogenesis GO:0060693
Any process that modulates the rate, frequency, or extent of branching morphogenesis in the salivary gland epithelium.
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2 | P97469 (/IMP) P97469 (/IMP) |
Trophoblast giant cell differentiation GO:0060707
The process in which a relatively unspecialized cell acquires specialized features of a trophoblast giant cell of the placenta. Trophoblast giant cells are the cell of the placenta that line the maternal decidua.
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2 | Q02085 (/IDA) Q02085 (/IDA) |
Negative regulation of cell differentiation involved in embryonic placenta development GO:0060806
Any process that decreases the rate, frequency or extent of cell differentiation that contributes to the progression of the placenta over time, from its initial condition to its mature state.
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2 | Q02085 (/IDA) Q02085 (/IDA) |
Left/right pattern formation GO:0060972
The pattern specification process that results in the subdivision of the left/right axis in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.
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2 | Q02085 (/IMP) Q02085 (/IMP) |
Cardioblast migration to the midline involved in heart field formation GO:0060975
The orderly movement of a cardioblast toward the midline to form the heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
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2 | B3DH44 (/IMP) Q90414 (/IMP) |
Notch signaling involved in heart development GO:0061314
The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the progression of the heart over time.
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2 | Q02085 (/IGI) Q02085 (/IGI) |
Negative regulation of vitamin D receptor signaling pathway GO:0070563
Any process that stops, prevents, or reduces the frequency, rate or extent of the vitamin D receptor signaling pathway activity.
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2 | P97469 (/ISO) P97469 (/ISO) |
Heterochromatin organization GO:0070828
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin, a compact and highly condensed form of chromatin.
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2 | Q02085 (/IMP) Q02085 (/IMP) |
Cellular response to epidermal growth factor stimulus GO:0071364
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epidermal growth factor stimulus.
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2 | P97469 (/ISO) P97469 (/ISO) |
Cellular response to ionizing radiation GO:0071479
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
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2 | P97469 (/IGI) P97469 (/IGI) |
Negative regulation of canonical Wnt signaling pathway GO:0090090
Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.
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2 | P97469 (/ISO) P97469 (/ISO) |
Negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter GO:1900387
A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cell-cell adhesion.
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2 | P97469 (/ISO) P97469 (/ISO) |
Negative regulation of stem cell proliferation GO:2000647
Any process that stops, prevents or reduces the frequency, rate or extent of stem cell proliferation.
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2 | P97469 (/IMP) P97469 (/IMP) |
Negative regulation of anoikis GO:2000811
Any process that stops, prevents or reduces the frequency, rate or extent of anoikis.
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2 | P97469 (/ISO) P97469 (/ISO) |
Positive regulation of endothelial cell chemotaxis GO:2001028
Any process that activates or increases the frequency, rate or extent of endothelial cell chemotaxis.
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2 | P97469 (/IC) P97469 (/IC) |
Regulation of neuron migration GO:2001222
Any process that modulates the frequency, rate or extent of neuron migration.
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2 | Q8BTH6 (/IMP) Q99M85 (/IMP) |
Negative regulation of extrinsic apoptotic signaling pathway in absence of ligand GO:2001240
Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.
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2 | P97469 (/IDA) P97469 (/IDA) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
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1 | P08044 (/TAS) |
Mesoderm formation GO:0001707
The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts.
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1 | O95863 (/ISS) |
Neural crest cell migration GO:0001755
The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo.
|
1 | P19382 (/IMP) |
Epithelial to mesenchymal transition GO:0001837
A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
|
1 | O95863 (/ISS) |
Epithelial to mesenchymal transition GO:0001837
A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
|
1 | Q91051 (/NAS) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q9QY31 (/IDA) |
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
1 | Q9QY31 (/IDA) |
Ventral furrow formation GO:0007370
Formation of a ventral indentation (furrow) from the blastoderm epithelium, which is internalized to form a tube in the interior of the embryo, marking the start of gastrulation.
|
1 | P08044 (/IGI) |
Malpighian tubule morphogenesis GO:0007443
The process in which the anatomical structures of the Malpighian tubule are generated and organized. This process takes place entirely during the embryonic phase. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which leads into the posterior part of the gut.
|
1 | P08044 (/IMP) |
Mesoderm development GO:0007498
The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue.
|
1 | P08044 (/NAS) |
Mesoderm development GO:0007498
The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue.
|
1 | P08044 (/TAS) |
Ectoderm and mesoderm interaction GO:0007499
A cell-cell signaling process occurring between the two gastrulation-generated layers of the ectoderm and the mesoderm.
|
1 | P08044 (/NAS) |
Mesodermal cell fate determination GO:0007500
The cell fate determination process in which a cell becomes capable of differentiating autonomously into a mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.
|
1 | P08044 (/TAS) |
Gastrulation involving germ band extension GO:0010004
A complex and coordinated series of cellular movements, including germ band extension, that occurs at the end of cleavage during embryonic development. An example of this process is found in Drosophila melanogaster.
|
1 | P08044 (/IMP) |
Gastrulation involving germ band extension GO:0010004
A complex and coordinated series of cellular movements, including germ band extension, that occurs at the end of cleavage during embryonic development. An example of this process is found in Drosophila melanogaster.
|
1 | P08044 (/TAS) |
Positive regulation of epithelial to mesenchymal transition GO:0010718
Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
|
1 | O95863 (/ISS) |
Positive regulation of epithelial to mesenchymal transition GO:0010718
Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
|
1 | O95863 (/TAS) |
Neural crest formation GO:0014029
The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes.
|
1 | Q91051 (/NAS) |
Neural crest cell fate specification GO:0014036
The process in which a cell becomes capable of differentiating autonomously into a neural crest cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.
|
1 | P19382 (/IMP) |
Positive regulation of histone deacetylation GO:0031065
Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.
|
1 | P08044 (/IDA) |
Adherens junction organization GO:0034332
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an adherens junction. An adherens junction is a cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments.
|
1 | P08044 (/IMP) |
Negative regulation of programmed cell death GO:0043069
Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes.
|
1 | G5ECN8 (/IMP) |
Cellular response to fibroblast growth factor stimulus GO:0044344
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an fibroblast growth factor stimulus.
|
1 | O08954 (/IEP) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | P08044 (/IMP) |
Compound eye development GO:0048749
The process whose specific outcome is the progression of the compound eye over time, from its formation to the mature structure. The compound eye is an organ of sight that contains multiple repeating units, often arranged hexagonally. Each unit has its own lens and photoreceptor cell(s) and can generate either a single pixelated image or multiple images, per eye.
|
1 | P08044 (/IMP) |
Regulation of neurogenesis GO:0050767
Any process that modulates the frequency, rate or extent of neurogenesis, the generation of cells in the nervous system.
|
1 | Q9VJP2 (/IMP) |
Cardiac epithelial to mesenchymal transition GO:0060317
A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
|
1 | A0A1D5PVG0 (/IMP) |
Notch signaling involved in heart development GO:0061314
The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the progression of the heart over time.
|
1 | O95863 (/ISS) |
Heterochromatin organization GO:0070828
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin, a compact and highly condensed form of chromatin.
|
1 | O95863 (/ISS) |
Negative regulation of extrinsic apoptotic signaling pathway via death domain receptors GO:1902042
Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.
|
1 | Q6YI50 (/IMP) |
Negative regulation of extrinsic apoptotic signaling pathway via death domain receptors GO:1902042
Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.
|
1 | Q9NQ03 (/ISS) |
Negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator GO:1902166
Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.
|
1 | Q6YI50 (/IC) |
There are 22 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
29 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(19 more) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
19 |
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
O43623 (/IDA)
(9 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
19 |
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
O43623 (/TAS)
(9 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
7 | O08954 (/ISS) O95863 (/ISS) P08044 (/ISS) P19382 (/ISS) Q3MHQ4 (/ISS) Q3MHQ4 (/ISS) Q3MHQ4 (/ISS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
5 | O95863 (/IDA) P97469 (/IDA) P97469 (/IDA) Q02085 (/IDA) Q02085 (/IDA) |
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
|
5 | Q9BWW7 (/IDA) Q9BWW7 (/IDA) Q9BWW7 (/IDA) Q9BWW7 (/IDA) Q9BWW7 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
4 | P97469 (/ISO) P97469 (/ISO) Q02085 (/ISO) Q02085 (/ISO) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | G5ECN8 (/IC) P25932 (/IC) P25932 (/IC) |
Pericentric heterochromatin GO:0005721
Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
3 | O95863 (/IDA) Q02085 (/IDA) Q02085 (/IDA) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
2 | P97469 (/ISO) P97469 (/ISO) |
Pericentric heterochromatin GO:0005721
Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
2 | Q02085 (/ISO) Q02085 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
2 | Q02085 (/ISO) Q02085 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
2 | Q02085 (/ISO) Q02085 (/ISO) |
Nuclear chromosome GO:0000228
A chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact.
|
1 | Q9W0P9 (/IDA) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
1 | Q9NQ03 (/ISS) |
Cell GO:0005623
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
|
1 | O12939 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9VZK2 (/HDA) |
Transcription factor complex GO:0005667
A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.
|
1 | Q9QY31 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
1 | O95863 (/ISS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | O95863 (/IDA) |
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
|
1 | Q99M85 (/ISO) |
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
|
1 | Q29R14 (/ISS) |