The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Classic Zinc Finger
".
FunFam 224: Zinc finger protein 329
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 5 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
15 |
O75123 (/ISA)
O75123 (/ISA)
O75123 (/ISA)
Q3ZCT1 (/ISA)
Q3ZCT1 (/ISA)
Q3ZCT1 (/ISA)
Q3ZCT1 (/ISA)
Q3ZCT1 (/ISA)
Q3ZCT1 (/ISA)
Q6ZN57 (/ISA)
(5 more) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
9 | Q3ZCT1 (/IPI) Q3ZCT1 (/IPI) Q3ZCT1 (/IPI) Q3ZCT1 (/IPI) Q3ZCT1 (/IPI) Q3ZCT1 (/IPI) Q6ZN57 (/IPI) Q86UD4 (/IPI) Q86UD4 (/IPI) |
|
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
1 | Q9VG72 (/ISS) |
|
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
1 | Q9VG72 (/ISS) |
|
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | Q9VG72 (/ISS) |
There are 13 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Vasculogenesis GO:0001570
The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Kidney development GO:0001822
The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Nitrogen compound metabolic process GO:0006807
The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Post-embryonic development GO:0009791
The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Smooth muscle cell migration GO:0014909
The orderly movement of a smooth muscle cell from one site to another, often during the development of a multicellular organism.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Hemopoiesis GO:0030097
The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Multicellular organism growth GO:0035264
The increase in size or mass of an entire multicellular organism, as opposed to cell growth.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Platelet-derived growth factor receptor signaling pathway GO:0048008
The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Skeletal system morphogenesis GO:0048705
The process in which the anatomical structures of the skeleton are generated and organized.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Smooth muscle tissue development GO:0048745
The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Roof of mouth development GO:0060021
The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Face morphogenesis GO:0060325
The process in which the anatomical structures of the face are generated and organized. The face is the ventral division of the head.
|
3 | Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) Q8K2Z5 (/IMP) |
|
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
1 | Q9VG72 (/ISS) |
There are 5 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
6 | Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) |
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
6 | Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) Q3ZCT1 (/IDA) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9VG72 (/ISS) |
|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | Q62513 (/ISO) |
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | Q62513 (/ISO) |
