The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Mago nashi
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: Protein mago nashi homolog

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 2 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
70 F1M0X6 (/IPI) F1M0X6 (/IPI) O23676 (/IPI) O23676 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI)
(60 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
54 P61326 (/HDA) P61326 (/HDA) P61326 (/HDA) P61326 (/HDA) P61326 (/HDA) P61326 (/HDA) P61326 (/HDA) P61326 (/HDA) P61326 (/HDA) P61326 (/HDA)
(44 more)

There are 34 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
244 B9ENE7 (/ISS) B9ENE7 (/ISS) B9ENE7 (/ISS) B9ENE7 (/ISS) B9ENE7 (/ISS) B9ENE7 (/ISS) B9ENE7 (/ISS) B9ENE7 (/ISS) B9ENE7 (/ISS) B9ENE7 (/ISS)
(234 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
64 P49028 (/IC) P49028 (/IC) P49028 (/IC) P49028 (/IC) P49028 (/IC) P49028 (/IC) P49028 (/IC) P49028 (/IC) P49028 (/IC) P49028 (/IC)
(54 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
57 P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO)
(47 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
54 P61326 (/IGI) P61326 (/IGI) P61326 (/IGI) P61326 (/IGI) P61326 (/IGI) P61326 (/IGI) P61326 (/IGI) P61326 (/IGI) P61326 (/IGI) P61326 (/IGI)
(44 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
54 P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS)
(44 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
54 P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS)
(44 more)
RNA export from nucleus GO:0006405
The directed movement of RNA from the nucleus to the cytoplasm.
54 P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS)
(44 more)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
54 P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS)
(44 more)
MRNA 3'-end processing GO:0031124
Any process involved in forming the mature 3' end of an mRNA molecule.
54 P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS)
(44 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
52 P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP)
(42 more)
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
52 P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP) P61326 (/IMP)
(42 more)
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
52 P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO)
(42 more)
Female gamete generation GO:0007292
Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction.
52 P61327 (/NAS) P61327 (/NAS) P61327 (/NAS) P61327 (/NAS) P61327 (/NAS) P61327 (/NAS) P61327 (/NAS) P61327 (/NAS) P61327 (/NAS) P61327 (/NAS)
(42 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
42 Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS)
(32 more)
Sex determination GO:0007530
Any process that establishes and transmits the specification of sexual status of an individual organism.
13 Q8IBJ9 (/ISS) Q8IBJ9 (/ISS) Q8IBJ9 (/ISS) Q8IBJ9 (/ISS) Q8IBJ9 (/ISS) Q8IBJ9 (/ISS) Q8IBJ9 (/ISS) Q8IBJ9 (/ISS) Q8IBJ9 (/ISS) Q8IBJ9 (/ISS)
(3 more)
Microtubule cytoskeleton organization GO:0000226
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
12 P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS)
(2 more)
Negative regulation of transposition, DNA-mediated GO:0000335
Any process that stops, prevents, or reduces the frequency, rate or extent of DNA transposition.
12 P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP)
(2 more)
Pole plasm assembly GO:0007315
Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.
12 P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS)
(2 more)
Regulation of pole plasm oskar mRNA localization GO:0007317
Any process that modulates the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
12 P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP)
(2 more)
Oocyte microtubule cytoskeleton polarization GO:0008103
Establishment and maintenance of a specific axis of polarity of the oocyte microtubule network. The axis is set so that the minus and plus ends of the microtubules of the mid stage oocyte are positioned along the anterior cortex and at the posterior pole, respectively. An example of this is found in Drosophila melanogaster.
12 P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP)
(2 more)
Protein localization GO:0008104
Any process in which a protein is transported to, or maintained in, a specific location.
12 P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP)
(2 more)
Protein localization GO:0008104
Any process in which a protein is transported to, or maintained in, a specific location.
12 P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI)
(2 more)
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
12 P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP)
(2 more)
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
12 P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP)
(2 more)
Oocyte microtubule cytoskeleton organization GO:0016325
Formation and maintenance of a polarized microtubule array originating from a microtubule-organizing center (MTOC) in the oocyte. An example of this is found in Drosophila melanogaster.
12 P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS)
(2 more)
Pole plasm oskar mRNA localization GO:0045451
Any process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
12 P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS)
(2 more)
Maintenance of pole plasm mRNA location GO:0046594
The process of maintaining mRNA in a specific location in the oocyte pole plasm. An example of this process is found in Drosophila melanogaster.
12 P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS) P49028 (/TAS)
(2 more)
Oogenesis GO:0048477
The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
12 P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP) P49028 (/IMP)
(2 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
5 Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
2 Q96A72 (/IDA) Q96A72 (/IDA)
Embryo development ending in seed dormancy GO:0009793
The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
2 O23676 (/IMP) O23676 (/IMP)
Pollen tube guidance GO:0010183
The process in which the growth of pollen tube is directed towards the female gametophyte.
2 O23676 (/IMP) O23676 (/IMP)
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
2 O23676 (/IEP) O23676 (/IEP)
MRNA cis splicing, via spliceosome GO:0045292
The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.
1 O43037 (/ISS)

There are 30 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
72 F1M0X6 (/IDA) F1M0X6 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA)
(62 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
57 P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO)
(47 more)
Exon-exon junction complex GO:0035145
A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.
57 P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO)
(47 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
54 P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS) P61326 (/TAS)
(44 more)
Exon-exon junction complex GO:0035145
A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.
54 P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA)
(44 more)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
52 P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA) P61326 (/IDA)
(42 more)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
52 P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO) P61327 (/ISO)
(42 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
42 Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS)
(32 more)
U2-type precatalytic spliceosome GO:0071005
A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.
42 Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS)
(32 more)
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
42 Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS) Q0VC92 (/ISS)
(32 more)
Exon-exon junction complex GO:0035145
A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.
14 O23676 (/IPI) O23676 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI) P49028 (/IPI)
(4 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
12 P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA)
(2 more)
Pole plasm GO:0045495
Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.
12 P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA) P49028 (/IDA)
(2 more)
Precatalytic spliceosome GO:0071011
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
12 P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA)
(2 more)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
12 P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA) P49028 (/HDA)
(2 more)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
5 Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO)
U2-type precatalytic spliceosome GO:0071005
A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.
5 Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO)
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
5 Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO) Q9CQL1 (/ISO)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
3 O23676 (/IDA) O23676 (/IDA) Q586G7 (/IDA)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
2 O23676 (/IDA) O23676 (/IDA)
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
2 O23676 (/IDA) O23676 (/IDA)
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
2 O23676 (/IDA) O23676 (/IDA)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
2 F1M0X6 (/IDA) F1M0X6 (/IDA)
U2-type precatalytic spliceosome GO:0071005
A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.
2 Q96A72 (/IDA) Q96A72 (/IDA)
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
2 Q96A72 (/IDA) Q96A72 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 O43037 (/HDA)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
1 Q4Q6T2 (/ISO)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q55E21 (/ISS)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 O43037 (/HDA)
Exon-exon junction subcomplex mago-y14 GO:1990501
Component of the core exon-exon-junction complex (EJC). Fairly conserved in eukaryotes; in Drosophila, consists of the Mago and Y14 (tsunagi) gene products. Important for coupling nuclear and cytoplasmic events in gene expression. Inhibits the ATPase activity of eIF4AIII (Q9VHS8) to ensure a stable association of the EJC core with the mRNA.
1 Q586G7 (/IPI)