CATH Superfamily 2.80.10.50
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 9: Ryanodine receptor 1 (skeletal)
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 31 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
7 | A6P4B8 (/IPI) E9PZQ0 (/IPI) F1LMY4 (/IPI) F1QEX9 (/IPI) P11716 (/IPI) P21817 (/IPI) Q9TS33 (/IPI) |
Ryanodine-sensitive calcium-release channel activity GO:0005219
Enables the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
|
6 | F1LMY4 (/IDA) F1LPJ2 (/IDA) F1M7A1 (/IDA) P11716 (/IDA) P21817 (/IDA) Q9TS33 (/IDA) |
Ryanodine-sensitive calcium-release channel activity GO:0005219
Enables the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
|
6 | A2AGL3 (/ISS) E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) |
Ryanodine-sensitive calcium-release channel activity GO:0005219
Enables the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
|
4 | A6P4B8 (/IMP) E9PZQ0 (/IMP) F1QEX9 (/IMP) P21817 (/IMP) |
Voltage-gated calcium channel activity GO:0005245
Enables the transmembrane transfer of a calcium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Calcium channel activity GO:0005262
Enables the facilitated diffusion of a calcium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Calcium ion binding GO:0005509
Interacting selectively and non-covalently with calcium ions (Ca2+).
|
4 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
4 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Toxic substance binding GO:0015643
Interacting selectively and non-covalently with a toxic substance, a poisonous substance that causes damage to biological systems.
|
3 | A0A060WZC7 (/IDA) G1U7D3 (/IDA) P11716 (/IDA) |
Ryanodine-sensitive calcium-release channel activity GO:0005219
Enables the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
|
2 | A2AGL3 (/ISO) E9PZQ0 (/ISO) |
Showing 1 to 10 of 31 entries
There are 65 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cellular response to caffeine GO:0071313
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them.
|
7 | A2AGL3 (/ISS) E9PZQ0 (/ISS) F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) |
Protein homotetramerization GO:0051289
The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits.
|
6 | A2AGL3 (/ISS) E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) |
Cellular response to calcium ion GO:0071277
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.
|
6 | A2AGL3 (/ISS) E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) |
Release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0014808
The process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.
|
5 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Outflow tract morphogenesis GO:0003151
The process in which the anatomical structures of the outflow tract are generated and organized. The outflow tract is the portion of the heart through which blood flows into the arteries.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Muscle contraction GO:0006936
A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0014808
The process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.
|
4 | A0A060WZC7 (/IMP) E9PZQ0 (/IMP) G1U7D3 (/IMP) P11716 (/IMP) |
Skin development GO:0043588
The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Ossification involved in bone maturation GO:0043931
The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in the progression of the skeleton from its formation to its mature state.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Skeletal muscle fiber development GO:0048741
The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
|
4 | F1LMY4 (/ISS) P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Showing 1 to 10 of 65 entries
There are 41 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Sarcoplasmic reticulum membrane GO:0033017
The lipid bilayer surrounding the sarcoplasmic reticulum.
|
6 | A2AGL3 (/IDA) E9PZQ0 (/IDA) F1LMY4 (/IDA) P11716 (/IDA) P21817 (/IDA) Q9TS33 (/IDA) |
Terminal cisterna GO:0014802
The portion of sarcoplasmic reticulum devoted to calcium ion storage and calcium ion release.
|
4 | A0A060WZC7 (/IDA) F1LMY4 (/IDA) G1U7D3 (/IDA) P11716 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
4 | A0A060WZC7 (/IDA) E9PZQ0 (/IDA) G1U7D3 (/IDA) P11716 (/IDA) |
Sarcoplasmic reticulum GO:0016529
A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle cell; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage.
|
4 | E9PZQ0 (/IDA) F1LMY4 (/IDA) P11716 (/IDA) Q9TS33 (/IDA) |
Integral component of organelle membrane GO:0031301
The component of the organelle membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
4 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Sarcoplasmic reticulum membrane GO:0033017
The lipid bilayer surrounding the sarcoplasmic reticulum.
|
4 | P11716 (/ISS) P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) |
Ryanodine receptor complex GO:1990425
A voltage-gated calcium-release channel complex of the sarcoplasmic or endoplasmic reticulum. It plays an important role in the excitation-contraction (E-C) coupling of muscle cells. RyR comprises a family of ryanodine receptors, widely expressed throughout the animal kingdom.
|
4 | E9PZQ0 (/ISS) F1LMY4 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Terminal cisterna GO:0014802
The portion of sarcoplasmic reticulum devoted to calcium ion storage and calcium ion release.
|
3 | E9PZQ0 (/ISS) P16960 (/ISS) P21817 (/ISS) |
Sarcoplasmic reticulum GO:0016529
A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle cell; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage.
|
3 | P16960 (/ISS) P21817 (/ISS) Q15413 (/ISS) |
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
|
2 | F1LPJ2 (/IDA) F1M7A1 (/IDA) |
Showing 1 to 10 of 41 entries