The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Cupin
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 10: bifunctional arginine demethylase and lysyl-hydrox...

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 38 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Peptidyl-lysine 5-dioxygenase activity GO:0070815
Catalysis of the reaction: protein L-lysine + 2-oxoglutarate + O2 = protein 5-hydroxy-L-lysine + succinate + CO2.
17 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q623U2 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS)
(7 more)
Single-stranded RNA binding GO:0003727
Interacting selectively and non-covalently with single-stranded RNA.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Demethylase activity GO:0032451
Catalysis of the removal of a methyl group from a substrate.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Histone demethylase activity GO:0032452
Catalysis of the removal of a methyl group from a histone.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Histone demethylase activity (H3-R2 specific) GO:0033746
Catalysis of the removal of a methyl group from arginine at position 2 of the histone H3 protein.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Histone demethylase activity (H4-R3 specific) GO:0033749
Catalysis of the removal of a methyl group from arginine at position 3 of the histone H4 protein.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Transcription coactivator activity GO:0003713
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to activate the transcription of specific genes. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. Another type of coregulator activity is the bridging of a DNA-binding transcription factor to the basal transcription machinery. The Mediator complex, which bridges transcription factors and RNA polymerase, is also a transcription coactivator.
8 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q9ERI5 (/ISS)
Oxidative RNA demethylase activity GO:0035515
Catalysis of the removal of a methyl group from one or more nucleosides within a RNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.
7 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q6AYK2 (/ISS) Q9ERI5 (/ISS)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
6 Q6NYC1 (/IPI) Q6NYC1 (/IPI) Q6NYC1 (/IPI) Q6NYC1 (/IPI) Q9ERI5 (/IPI) Q9GYI4 (/IPI)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
6 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q9ERI5 (/IDA) Q9GYI4 (/IDA)
Transcription coactivator activity GO:0003713
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to activate the transcription of specific genes. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. Another type of coregulator activity is the bridging of a DNA-binding transcription factor to the basal transcription machinery. The Mediator complex, which bridges transcription factors and RNA polymerase, is also a transcription coactivator.
4 Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
4 Q6NYC1 (/TAS) Q6NYC1 (/TAS) Q6NYC1 (/TAS) Q6NYC1 (/TAS)
Single-stranded RNA binding GO:0003727
Interacting selectively and non-covalently with single-stranded RNA.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Iron ion binding GO:0005506
Interacting selectively and non-covalently with iron (Fe) ions.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Demethylase activity GO:0032451
Catalysis of the removal of a methyl group from a substrate.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Histone demethylase activity GO:0032452
Catalysis of the removal of a methyl group from a histone.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Histone demethylase activity GO:0032452
Catalysis of the removal of a methyl group from a histone.
4 Q6NYC1 (/TAS) Q6NYC1 (/TAS) Q6NYC1 (/TAS) Q6NYC1 (/TAS)
Histone demethylase activity (H3-R2 specific) GO:0033746
Catalysis of the removal of a methyl group from arginine at position 2 of the histone H3 protein.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Histone demethylase activity (H4-R3 specific) GO:0033749
Catalysis of the removal of a methyl group from arginine at position 3 of the histone H4 protein.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Oxidative RNA demethylase activity GO:0035515
Catalysis of the removal of a methyl group from one or more nucleosides within a RNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.
4 Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
4 Q6NYC1 (/IPI) Q6NYC1 (/IPI) Q6NYC1 (/IPI) Q6NYC1 (/IPI)
Peptidyl-lysine 5-dioxygenase activity GO:0070815
Catalysis of the reaction: protein L-lysine + 2-oxoglutarate + O2 = protein 5-hydroxy-L-lysine + succinate + CO2.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
P-TEFb complex binding GO:0106140
Interacting selectively and non-covalently with the P-TEFb complex.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Phosphatidylserine binding GO:0001786
Interacting selectively and non-covalently with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine.
1 Q9GYI4 (/IDA)
Transcription coactivator activity GO:0003713
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to activate the transcription of specific genes. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. Another type of coregulator activity is the bridging of a DNA-binding transcription factor to the basal transcription machinery. The Mediator complex, which bridges transcription factors and RNA polymerase, is also a transcription coactivator.
1 Q9ERI5 (/ISO)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
1 Q9ERI5 (/IDA)
Single-stranded RNA binding GO:0003727
Interacting selectively and non-covalently with single-stranded RNA.
1 Q9ERI5 (/ISO)
Iron ion binding GO:0005506
Interacting selectively and non-covalently with iron (Fe) ions.
1 Q9ERI5 (/ISO)
Demethylase activity GO:0032451
Catalysis of the removal of a methyl group from a substrate.
1 Q9ERI5 (/ISO)
Histone demethylase activity GO:0032452
Catalysis of the removal of a methyl group from a histone.
1 Q9ERI5 (/ISO)
Histone demethylase activity (H3-R2 specific) GO:0033746
Catalysis of the removal of a methyl group from arginine at position 2 of the histone H3 protein.
1 Q9ERI5 (/ISO)
Histone demethylase activity (H4-R3 specific) GO:0033749
Catalysis of the removal of a methyl group from arginine at position 3 of the histone H4 protein.
1 Q9ERI5 (/ISO)
Oxidative RNA demethylase activity GO:0035515
Catalysis of the removal of a methyl group from one or more nucleosides within a RNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.
1 Q9ERI5 (/ISO)
Signaling receptor activity GO:0038023
Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
1 Q9ERI5 (/IDA)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
1 Q9ERI5 (/ISO)
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
1 Q9ERI5 (/IDA)
Peptidyl-lysine 5-dioxygenase activity GO:0070815
Catalysis of the reaction: protein L-lysine + 2-oxoglutarate + O2 = protein 5-hydroxy-L-lysine + succinate + CO2.
1 Q9ERI5 (/ISO)
P-TEFb complex binding GO:0106140
Interacting selectively and non-covalently with the P-TEFb complex.
1 Q9ERI5 (/ISO)

There are 46 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine GO:0018395
The hydroxylation of peptidyl-lysine to peptidyl-5-hydroxy-L-lysine.
17 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q623U2 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS)
(7 more)
Sprouting angiogenesis GO:0002040
The extension of new blood vessels from existing vessels into avascular tissues, this process includes the specialization of endothelial cells into leading tip and stalk cells, proliferation and migration of the endothelial cells and cell adhesion resulting in angiogenic sprout fusion or lumen formation.
16 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6NYC1 (/ISS)
(6 more)
Protein demethylation GO:0006482
The removal of a methyl group, from a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Protein homooligomerization GO:0051260
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Histone H4-R3 demethylation GO:0070079
The modification of histone H4 by the removal of a methyl group from arginine at position 3 of the histone.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Regulation of mRNA splicing, via spliceosome GO:0048024
Any process that modulates the frequency, rate or extent of mRNA splicing via a spliceosomal mechanism.
12 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(2 more)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
8 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q9ERI5 (/ISS)
Oxidative RNA demethylation GO:0035513
The removal of the methyl group from one or more nucleotides within an RNA molecule involving oxidation (i.e. electron loss) of one or more atoms.
7 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q6AYK2 (/ISS) Q9ERI5 (/ISS)
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
7 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q6AYK2 (/ISS) Q9ERI5 (/ISS)
Regulation of mRNA splicing, via spliceosome GO:0048024
Any process that modulates the frequency, rate or extent of mRNA splicing via a spliceosomal mechanism.
5 Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q9ERI5 (/IMP)
Protein demethylation GO:0006482
The removal of a methyl group, from a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine GO:0018395
The hydroxylation of peptidyl-lysine to peptidyl-5-hydroxy-L-lysine.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Oxidative RNA demethylation GO:0035513
The removal of the methyl group from one or more nucleotides within an RNA molecule involving oxidation (i.e. electron loss) of one or more atoms.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
4 Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP)
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Protein homooligomerization GO:0051260
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Histone H3-R2 demethylation GO:0070078
The modification of histone H3 by the removal of a methyl group from arginine at position 2 of the histone.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Histone H4-R3 demethylation GO:0070079
The modification of histone H4 by the removal of a methyl group from arginine at position 3 of the histone.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Blood vessel development GO:0001568
The process whose specific outcome is the progression of a blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood.
1 Q9ERI5 (/IMP)
Kidney development GO:0001822
The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.
1 Q9ERI5 (/IMP)
Sprouting angiogenesis GO:0002040
The extension of new blood vessels from existing vessels into avascular tissues, this process includes the specialization of endothelial cells into leading tip and stalk cells, proliferation and migration of the endothelial cells and cell adhesion resulting in angiogenic sprout fusion or lumen formation.
1 Q9ERI5 (/IMP)
Protein demethylation GO:0006482
The removal of a methyl group, from a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.
1 Q9ERI5 (/ISO)
Phagocytosis GO:0006909
A vesicle-mediated transport process that results in the engulfment of external particulate material by phagocytes and their delivery to the lysosome. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles.
1 Q6PFM0 (/IMP)
Cell surface receptor signaling pathway GO:0007166
A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.
1 Q9ERI5 (/IDA)
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
1 Q9ERI5 (/IMP)
Peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine GO:0018395
The hydroxylation of peptidyl-lysine to peptidyl-5-hydroxy-L-lysine.
1 Q9ERI5 (/ISO)
Lung development GO:0030324
The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.
1 Q9ERI5 (/IMP)
T cell differentiation in thymus GO:0033077
The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus.
1 Q9ERI5 (/IMP)
Cell competition in a multicellular organism GO:0035212
Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.
1 Q9VD28 (/IMP)
Oxidative RNA demethylation GO:0035513
The removal of the methyl group from one or more nucleotides within an RNA molecule involving oxidation (i.e. electron loss) of one or more atoms.
1 Q9ERI5 (/ISO)
Macrophage activation GO:0042116
A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.
1 Q9ERI5 (/IMP)
Negative regulation of apoptotic process GO:0043066
Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
1 Q9VD28 (/IGI)
Negative regulation of apoptotic process GO:0043066
Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
1 Q9VD28 (/IMP)
Apoptotic cell clearance GO:0043277
The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte.
1 Q9ERI5 (/IMP)
Engulfment of apoptotic cell GO:0043652
The removal of the apoptotic cell by phagocytosis, by a neighboring cell or by a phagocyte.
1 Q9GYI4 (/IDA)
Engulfment of apoptotic cell GO:0043652
The removal of the apoptotic cell by phagocytosis, by a neighboring cell or by a phagocyte.
1 Q9GYI4 (/IGI)
Engulfment of apoptotic cell GO:0043652
The removal of the apoptotic cell by phagocytosis, by a neighboring cell or by a phagocyte.
1 Q9GYI4 (/IMP)
Recognition of apoptotic cell GO:0043654
The process in which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis.
1 Q9ERI5 (/IDA)
Recognition of apoptotic cell GO:0043654
The process in which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis.
1 Q9ERI5 (/IMP)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
1 Q9ERI5 (/ISO)
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
1 Q9ERI5 (/ISO)
Negative regulation of JNK cascade GO:0046329
Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade.
1 Q9VD28 (/IGI)
Regulation of mRNA splicing, via spliceosome GO:0048024
Any process that modulates the frequency, rate or extent of mRNA splicing via a spliceosomal mechanism.
1 Q9ERI5 (/ISO)
Erythrocyte development GO:0048821
The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure.
1 Q9ERI5 (/IMP)
Protein homooligomerization GO:0051260
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
1 Q9ERI5 (/ISO)
Retina development in camera-type eye GO:0060041
The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.
1 Q9ERI5 (/IMP)

There are 18 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
15 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q623U2 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS)
(5 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
13 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(3 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
12 Q58DS6 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5R6G2 (/ISS) Q5ZMK5 (/ISS) Q6AYK2 (/ISS) Q6GND3 (/ISS) Q6GND3 (/ISS) Q6PFM0 (/ISS)
(2 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
11 B2WTI4 (/IDA) K7EJU9 (/IDA) K7EJU9 (/IDA) K7EJU9 (/IDA) K7EJU9 (/IDA) K7EJU9 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
(1 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
7 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6Q4H1 (/IDA) Q9ERI5 (/IDA) Q9VD28 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
4 Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP) Q6NYC1 (/IMP)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
4 Q6NYC1 (/TAS) Q6NYC1 (/TAS) Q6NYC1 (/TAS) Q6NYC1 (/TAS)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
4 Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA) Q6NYC1 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q9ERI5 (/ISO)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
1 Q9ERI5 (/ISO)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
1 Q9ERI5 (/ISO)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q9ERI5 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q9ERI5 (/IDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
1 Q9ERI5 (/IDA)
Spanning component of plasma membrane GO:0044214
The component of the plasma membrane consisting of gene products and protein complexes that have some part that spans both leaflets of the membrane.
1 Q9GYI4 (/IDA)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
1 Q9ERI5 (/IDA)