The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 228: Rab3 interacting molecule, isoform R

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 2 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
1 Q22366 (/IPI)
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
1 Q22366 (/IPI)

There are 18 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Neurotransmitter secretion GO:0007269
The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission.
10 A0A0B4K677 (/NAS) A0A0B4K679 (/NAS) A0A0B4K6B1 (/NAS) A0A0B4K6B7 (/NAS) A0A0B4K6L8 (/NAS) A0A0B4K6M2 (/NAS) A0A0B4K742 (/NAS) A0A0B4K7E1 (/NAS) A0A0B4K7E7 (/NAS) Q9VEE5 (/NAS)
Neuromuscular synaptic transmission GO:0007274
The process of synaptic transmission from a neuron to a muscle, across a synapse.
10 A0A0B4K677 (/IMP) A0A0B4K679 (/IMP) A0A0B4K6B1 (/IMP) A0A0B4K6B7 (/IMP) A0A0B4K6L8 (/IMP) A0A0B4K6M2 (/IMP) A0A0B4K742 (/IMP) A0A0B4K7E1 (/IMP) A0A0B4K7E7 (/IMP) Q9VEE5 (/IMP)
Synaptic vesicle exocytosis GO:0016079
Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft.
10 A0A0B4K677 (/ISS) A0A0B4K679 (/ISS) A0A0B4K6B1 (/ISS) A0A0B4K6B7 (/ISS) A0A0B4K6L8 (/ISS) A0A0B4K6M2 (/ISS) A0A0B4K742 (/ISS) A0A0B4K7E1 (/ISS) A0A0B4K7E7 (/ISS) Q9VEE5 (/ISS)
Vesicle-mediated transport GO:0016192
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
10 A0A0B4K677 (/NAS) A0A0B4K679 (/NAS) A0A0B4K6B1 (/NAS) A0A0B4K6B7 (/NAS) A0A0B4K6L8 (/NAS) A0A0B4K6M2 (/NAS) A0A0B4K742 (/NAS) A0A0B4K7E1 (/NAS) A0A0B4K7E7 (/NAS) Q9VEE5 (/NAS)
Regulation of synaptic plasticity GO:0048167
A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.
10 A0A0B4K677 (/IMP) A0A0B4K679 (/IMP) A0A0B4K6B1 (/IMP) A0A0B4K6B7 (/IMP) A0A0B4K6L8 (/IMP) A0A0B4K6M2 (/IMP) A0A0B4K742 (/IMP) A0A0B4K7E1 (/IMP) A0A0B4K7E7 (/IMP) Q9VEE5 (/IMP)
Clustering of voltage-gated calcium channels GO:0070073
The process in which voltage-gated calcium channels become localized together in high densities.
10 A0A0B4K677 (/IMP) A0A0B4K679 (/IMP) A0A0B4K6B1 (/IMP) A0A0B4K6B7 (/IMP) A0A0B4K6L8 (/IMP) A0A0B4K6M2 (/IMP) A0A0B4K742 (/IMP) A0A0B4K7E1 (/IMP) A0A0B4K7E7 (/IMP) Q9VEE5 (/IMP)
Synaptic transmission, cholinergic GO:0007271
The vesicular release of acetylcholine from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.
1 Q22366 (/IMP)
Mating behavior GO:0007617
The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes.
1 Q22366 (/IMP)
Locomotory behavior GO:0007626
The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions.
1 Q22366 (/IMP)
Protein localization GO:0008104
Any process in which a protein is transported to, or maintained in, a specific location.
1 Q22366 (/IMP)
Synaptic vesicle priming GO:0016082
A process that converts synaptic vesicles to a state of competence for calcium triggered fusion with the active zone membrane by bringing the two membranes into very close proximity. Priming typically (but not always) occurs after docking (Jahn and Fasshauer, 2012). Primed vesicles are also capable of spontaneously fusing with the active zone membrane.
1 Q22366 (/IDA)
Calcium-ion regulated exocytosis GO:0017156
The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, induced by a rise in cytosolic calcium-ion levels.
1 Q9VEE5 (/ISS)
Defecation GO:0030421
The expulsion of feces from the rectum.
1 Q22366 (/IMP)
Positive regulation of synaptic transmission, cholinergic GO:0032224
Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.
1 Q22366 (/IMP)
Locomotion GO:0040011
Self-propelled movement of a cell or organism from one location to another.
1 Q22366 (/IMP)
Positive regulation of multicellular organism growth GO:0040018
Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size.
1 Q22366 (/IMP)
Regulation of pharyngeal pumping GO:0043051
Any process that modulates the contraction and relaxation movements of the pharyngeal muscle that mediates feeding in nematodes.
1 Q22366 (/IMP)
Positive regulation of synaptic transmission GO:0050806
Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse.
1 Q22366 (/IDA)

There are 5 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Presynaptic active zone GO:0048786
A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.
11 A0A0B4K677 (/IDA) A0A0B4K679 (/IDA) A0A0B4K6B1 (/IDA) A0A0B4K6B7 (/IDA) A0A0B4K6L8 (/IDA) A0A0B4K6M2 (/IDA) A0A0B4K742 (/IDA) A0A0B4K7E1 (/IDA) A0A0B4K7E7 (/IDA) Q22366 (/IDA)
(1 more)
Synaptic vesicle GO:0008021
A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
10 A0A0B4K677 (/NAS) A0A0B4K679 (/NAS) A0A0B4K6B1 (/NAS) A0A0B4K6B7 (/NAS) A0A0B4K6L8 (/NAS) A0A0B4K6M2 (/NAS) A0A0B4K742 (/NAS) A0A0B4K7E1 (/NAS) A0A0B4K7E7 (/NAS) Q9VEE5 (/NAS)
Axon GO:0030424
The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
1 Q22366 (/IDA)
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
1 Q22366 (/IDA)
Cytoskeleton of presynaptic active zone GO:0048788
The specialized cytoskeletal matrix of the presynaptic active zone. It has specialized functions in organizing synaptic events such as immobilisation or translocation of synaptic vesicles, and assembling active zone components. It is believed to form a molecular scaffold that organizes neurotransmitter release sites.
1 A0A0B4K6M2 (/IDA)
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