The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Zn-finger domain of Sec23/24
".
FunFam 6: TGF-beta activated kinase 1 (MAP3K7) binding prote...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
6 | Q5U303 (/IPI) Q99K90 (/IPI) Q9NYJ8 (/IPI) Q9NYJ8 (/IPI) Q9NYJ8 (/IPI) Q9NYJ8 (/IPI) |
K63-linked polyubiquitin modification-dependent protein binding GO:0070530
Interacting selectively and non-covalently with a protein upon poly-ubiquitination formed by linkages between lysine residues at position 63 in the target protein.
|
4 | Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) |
K63-linked polyubiquitin modification-dependent protein binding GO:0070530
Interacting selectively and non-covalently with a protein upon poly-ubiquitination formed by linkages between lysine residues at position 63 in the target protein.
|
2 | Q5U303 (/ISS) Q99K90 (/ISS) |
K63-linked polyubiquitin modification-dependent protein binding GO:0070530
Interacting selectively and non-covalently with a protein upon poly-ubiquitination formed by linkages between lysine residues at position 63 in the target protein.
|
1 | Q99K90 (/ISO) |
There are 22 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
5 | Q5RFW2 (/IMP) Q9NYJ8 (/IMP) Q9NYJ8 (/IMP) Q9NYJ8 (/IMP) Q9NYJ8 (/IMP) |
Activation of MAPK activity GO:0000187
The initiation of the activity of the inactive enzyme MAP kinase (MAPK).
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Stimulatory C-type lectin receptor signaling pathway GO:0002223
Any series of molecular signals generated as a consequence of binding to a C-type lectin receptor capable of cellular activation.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
MyD88-dependent toll-like receptor signaling pathway GO:0002755
Any series of molecular signals generated as a consequence of binding to a toll-like receptor where the MyD88 adaptor molecule mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
I-kappaB kinase/NF-kappaB signaling GO:0007249
The process in which a signal is passed on to downstream components within the cell through the I-kappaB-kinase (IKK)-dependent activation of NF-kappaB. The cascade begins with activation of a trimeric IKK complex (consisting of catalytic kinase subunits IKKalpha and/or IKKbeta, and the regulatory scaffold protein NEMO) and ends with the regulation of transcription of target genes by NF-kappaB. In a resting state, NF-kappaB dimers are bound to I-kappaB proteins, sequestering NF-kappaB in the cytoplasm. Phosphorylation of I-kappaB targets I-kappaB for ubiquitination and proteasomal degradation, thus releasing the NF-kappaB dimers, which can translocate to the nucleus to bind DNA and regulate transcription.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
JNK cascade GO:0007254
An intracellular protein kinase cascade containing at least a JNK (a MAPK), a JNKK (a MAPKK) and a JUN3K (a MAP3K). The cascade can also contain an additional tier: the upstream MAP4K. The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Negative regulation of autophagy GO:0010507
Any process that stops, prevents, or reduces the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Response to lipopolysaccharide GO:0032496
Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
|
4 | Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) |
Fc-epsilon receptor signaling pathway GO:0038095
A series of molecular signals initiated by the binding of the Fc portion of immunoglobulin E (IgE) to an Fc-epsilon receptor on the surface of a signal-receiving cell, and ending with regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Positive regulation of I-kappaB kinase/NF-kappaB signaling GO:0043123
Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling.
|
4 | Q9NYJ8 (/IEP) Q9NYJ8 (/IEP) Q9NYJ8 (/IEP) Q9NYJ8 (/IEP) |
Positive regulation of protein kinase activity GO:0045860
Any process that activates or increases the frequency, rate or extent of protein kinase activity.
|
4 | Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) |
T cell receptor signaling pathway GO:0050852
A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Positive regulation of NF-kappaB transcription factor activity GO:0051092
Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Nucleotide-binding oligomerization domain containing signaling pathway GO:0070423
Any series of molecular signals generated as a consequence of binding to a nucleotide-binding oligomerization domain containing (NOD) protein.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Interleukin-1-mediated signaling pathway GO:0070498
A series of molecular signals initiated by the binding of interleukin-1 to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
2 | Q5U303 (/ISS) Q99K90 (/ISS) |
Positive regulation of protein kinase activity GO:0045860
Any process that activates or increases the frequency, rate or extent of protein kinase activity.
|
2 | Q5U303 (/ISS) Q99K90 (/ISS) |
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
1 | Q99K90 (/ISO) |
Response to lipopolysaccharide GO:0032496
Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
|
1 | Q99K90 (/ISO) |
Chordate embryonic development GO:0043009
The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.
|
1 | Q5RFW2 (/IMP) |
Positive regulation of protein kinase activity GO:0045860
Any process that activates or increases the frequency, rate or extent of protein kinase activity.
|
1 | Q99K90 (/ISO) |
Convergent extension involved in gastrulation GO:0060027
The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis usually resulting in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.
|
1 | Q5RFW2 (/IMP) |
There are 6 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
5 | Q99K90 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
5 | A0A1B0GV57 (/IDA) Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) Q9NYJ8 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
5 | Q99K90 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Endosome membrane GO:0010008
The lipid bilayer surrounding an endosome.
|
4 | Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) Q9NYJ8 (/TAS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | Q99K90 (/ISO) |