The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
YVTN repeat-like/Quinoprotein amine dehydrogenase
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 84: mRNA export factor

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 5 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
19 P78406 (/IPI) P78406 (/IPI) P78406 (/IPI) P78406 (/IPI) P78406 (/IPI) P78406 (/IPI) P78406 (/IPI) P78406 (/IPI) P78406 (/IPI) P78406 (/IPI)
(9 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
13 P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA)
(3 more)
Microtubule binding GO:0008017
Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
13 P78406 (/ISS) P78406 (/ISS) P78406 (/ISS) P78406 (/ISS) P78406 (/ISS) P78406 (/ISS) P78406 (/ISS) P78406 (/ISS) P78406 (/ISS) P78406 (/ISS)
(3 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
1 Q8C570 (/ISO)
Microtubule binding GO:0008017
Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
1 Q7ZZY7 (/IDA)

There are 21 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Regulation of mitotic spindle organization GO:0060236
Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
21 A5GFN6 (/ISS) A5GFN6 (/ISS) Q3SWS8 (/ISS) Q4R6D2 (/ISS) Q5E9A4 (/ISS) Q5FVA9 (/ISS) Q5RF99 (/ISS) Q5RF99 (/ISS) Q5RF99 (/ISS) Q5RF99 (/ISS)
(11 more)
Regulation of glycolytic process GO:0006110
Any process that modulates the frequency, rate or extent of glycolysis.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
TRNA export from nucleus GO:0006409
The directed movement of tRNA from the nucleus to the cytoplasm.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Viral process GO:0016032
A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Protein sumoylation GO:0016925
The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Viral transcription GO:0019083
The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Regulation of mitotic spindle organization GO:0060236
Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
13 P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP)
(3 more)
Regulation of gene silencing by miRNA GO:0060964
Any process that modulates the rate, frequency, or extent of the downregulation of gene expression through the action of microRNAs (miRNAs), endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: RNA (often mRNA) cleavage or mRNA translational repression.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Intracellular transport of virus GO:0075733
The directed movement of a virus, or part of a virus, within the host cell.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Regulation of cellular response to heat GO:1900034
Any process that modulates the frequency, rate or extent of cellular response to heat.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Mitotic cell cycle GO:0000278
Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent.
4 Q7JVX4 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP)
Male meiosis I GO:0007141
A cell cycle process comprising the steps by which a cell progresses through male meiosis I, the first meiotic division in the male germline.
4 Q7JVX4 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP)
Spermatogenesis GO:0007283
The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.
4 Q7JVX4 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP)
Regulation of autophagy GO:0010506
Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
4 Q7JVX4 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP)
Negative regulation of synaptic growth at neuromuscular junction GO:0045886
Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic growth at neuromuscular junction.
4 Q7JVX4 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP)
Regulation of G1/S transition of mitotic cell cycle GO:2000045
Any signalling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.
4 Q7JVX4 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP) Q9W2E7 (/IMP)
Negative regulation of synaptic growth at neuromuscular junction GO:0045886
Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic growth at neuromuscular junction.
3 Q9W2E7 (/IGI) Q9W2E7 (/IGI) Q9W2E7 (/IGI)
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
1 Q7JVX4 (/IMP)
Regulation of mitotic spindle organization GO:0060236
Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
1 Q8C570 (/ISO)
Cellular response to organic cyclic compound GO:0071407
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus.
1 Q8C570 (/IDA)

There are 18 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Mitotic spindle pole GO:0097431
Either of the ends of a mitotic spindle, a spindle that forms as part of mitosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.
21 A5GFN6 (/ISS) A5GFN6 (/ISS) Q3SWS8 (/ISS) Q4R6D2 (/ISS) Q5E9A4 (/ISS) Q5FVA9 (/ISS) Q5RF99 (/ISS) Q5RF99 (/ISS) Q5RF99 (/ISS) Q5RF99 (/ISS)
(11 more)
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
18 P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA)
(8 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
17 P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA)
(7 more)
Fibrillar center GO:0001650
A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
13 P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA)
(3 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Nuclear pore GO:0005643
Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
13 P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA) P78406 (/IDA)
(3 more)
Nuclear pore GO:0005643
Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
13 P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS) P78406 (/TAS)
(3 more)
Mitotic spindle pole GO:0097431
Either of the ends of a mitotic spindle, a spindle that forms as part of mitosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.
13 P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP) P78406 (/IMP)
(3 more)
Nuclear pore GO:0005643
Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
4 Q7JVX4 (/IPI) Q9W2E7 (/IPI) Q9W2E7 (/IPI) Q9W2E7 (/IPI)
Nebenkern GO:0016006
A product of the fusion of the mitochondria during spermatogenesis. After the completion of meiosis the mitochondria of the spermatid collect along side the nucleus and fuse into two masses; these wrap around each other to produce the spherical Nebenkern. During flagellum elongation the Nebenkern unfolds and the two derivatives (major and minor mitochondrial derivatives) elongate down the axoneme.
4 Q7JVX4 (/IDA) Q9W2E7 (/IDA) Q9W2E7 (/IDA) Q9W2E7 (/IDA)
Sperm flagellum GO:0036126
A microtubule-based flagellum (or cilium) that is part of a sperm, a mature male germ cell that develops from a spermatid.
4 Q7JVX4 (/IDA) Q9W2E7 (/IDA) Q9W2E7 (/IDA) Q9W2E7 (/IDA)
Fibrillar center GO:0001650
A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
1 Q8C570 (/ISO)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q8C570 (/ISO)
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
1 Q8C570 (/ISO)
Nuclear pore GO:0005643
Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
1 Q8C570 (/ISO)
Mitotic spindle pole GO:0097431
Either of the ends of a mitotic spindle, a spindle that forms as part of mitosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.
1 Q8C570 (/ISO)
CATH-Gene3D is a Global Biodata Core Resource Learn more...