The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 4: tropomyosin alpha-1 chain isoform X1

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 16 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
56 P02561 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS)
(46 more)
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
56 P02561 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS)
(46 more)
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
56 P02561 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS)
(46 more)
Actin filament binding GO:0051015
Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
56 P02561 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS) P67936 (/ISS)
(46 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
54 P67936 (/IPI) P67936 (/IPI) P67936 (/IPI) P67936 (/IPI) P67936 (/IPI) P67936 (/IPI) P67936 (/IPI) P67936 (/IPI) P67936 (/IPI) P67936 (/IPI)
(44 more)
Calcium ion binding GO:0005509
Interacting selectively and non-covalently with calcium ions (Ca2+).
27 P67936 (/NAS) P67936 (/NAS) P67936 (/NAS) P67936 (/NAS) P67936 (/NAS) P67936 (/NAS) P67936 (/NAS) P67936 (/NAS) P67936 (/NAS) P67936 (/NAS)
(17 more)
Structural constituent of muscle GO:0008307
The action of a molecule that contributes to the structural integrity of a muscle fiber.
27 P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS)
(17 more)
Actin filament binding GO:0051015
Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
2 P09495 (/IDA) Q6IRU2 (/IDA)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
1 P09495 (/IDA)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
1 Q6IRU2 (/ISO)
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
1 P09495 (/IDA)
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
1 Q6IRU2 (/ISO)
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
1 P09495 (/IDA)
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
1 Q6IRU2 (/ISO)
Actin filament binding GO:0051015
Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
1 G3UPJ2 (/IPI)
Actin filament binding GO:0051015
Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
1 Q6IRU2 (/ISO)

There are 9 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Muscle contraction GO:0006936
A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis.
28 P09495 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS)
(18 more)
Osteoblast differentiation GO:0001649
The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone.
27 P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA)
(17 more)
Muscle filament sliding GO:0030049
The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated.
27 P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS)
(17 more)
Skeletal myofibril assembly GO:0014866
The process whose specific outcome is the progression of the skeletal myofibril over time, from its formation to the mature structure. A skeletal myofibril is a myofibril specific to skeletal muscle cells.
4 A0A2R8Q650 (/IMP) A0A2R8RR81 (/IMP) I3ISQ1 (/IMP) Q803M1 (/IMP)
Cardiac myofibril assembly GO:0055003
The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells.
3 F1R412 (/IMP) Q1LXM2 (/IMP) Q7T3F0 (/IMP)
Heart contraction GO:0060047
The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body.
3 F1R412 (/IMP) Q1LXM2 (/IMP) Q7T3F0 (/IMP)
Cardiac muscle contraction GO:0060048
Muscle contraction of cardiac muscle tissue.
3 F1R412 (/IMP) Q1LXM2 (/IMP) Q7T3F0 (/IMP)
Brain development GO:0007420
The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
1 Q63610 (/IEP)
Positive regulation of actin-dependent ATPase activity GO:1904623
Any process that activates or increases the frequency, rate or extent of actin-dependent ATPase activity.
1 G3UPJ2 (/IDA)

There are 18 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Actin cytoskeleton GO:0015629
The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
57 A0A024R5W6 (/IDA) A0A024R5W6 (/IDA) A0A024R5W6 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA)
(47 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
56 A0A024R5W6 (/IDA) A0A024R5W6 (/IDA) A0A024R5W6 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA) A0A0S2Z4G4 (/IDA)
(46 more)
Actin cytoskeleton GO:0015629
The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
29 P02561 (/ISS) P67937 (/ISS) P67937 (/ISS) P67937 (/ISS) P67937 (/ISS) P67937 (/ISS) P67937 (/ISS) P67937 (/ISS) P67937 (/ISS) P67937 (/ISS)
(19 more)
Stress fiber GO:0001725
A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.
27 P67936 (/IDA) P67936 (/IDA) P67936 (/IDA) P67936 (/IDA) P67936 (/IDA) P67936 (/IDA) P67936 (/IDA) P67936 (/IDA) P67936 (/IDA) P67936 (/IDA)
(17 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
27 P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS)
(17 more)
Cytoskeleton GO:0005856
Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
27 P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS)
(17 more)
Muscle thin filament tropomyosin GO:0005862
A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments.
27 P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS) P67936 (/TAS)
(17 more)
Focal adhesion GO:0005925
Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
27 P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA)
(17 more)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
27 P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA)
(17 more)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
27 P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA) P67936 (/HDA)
(17 more)
Striated muscle thin filament GO:0005865
Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.
2 A0A0R4IAL5 (/IDA) A0A0R4IM99 (/IDA)
Stress fiber GO:0001725
A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.
1 Q6IRU2 (/ISO)
Podosome GO:0002102
An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm.
1 Q6IRU2 (/IDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q6IRU2 (/IDA)
Actin filament GO:0005884
A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
1 G3UPJ2 (/IDA)
Brush border GO:0005903
The dense covering of microvilli on the apical surface of a epithelial cells in tissues such as the intestine, kidney, and choroid plexus; the microvilli aid absorption by increasing the surface area of the cell.
1 Q63610 (/IDA)
Actin cytoskeleton GO:0015629
The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
1 Q6IRU2 (/ISO)
Cortical cytoskeleton GO:0030863
The portion of the cytoskeleton that lies just beneath the plasma membrane.
1 Q6IRU2 (/IDA)
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