The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: 40S ribosomal protein S6

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 11 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
80 P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI)
(70 more)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
42 P05752 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(32 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
40 P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA)
(30 more)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
40 P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA)
(30 more)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
40 P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP)
(30 more)
Protein kinase binding GO:0019901
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
40 P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI) P62753 (/IPI)
(30 more)
Protein kinase binding GO:0019901
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
12 P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX38 (/IDA) P0CX38 (/IDA) P0CX38 (/IDA) P0CX38 (/IDA)
(2 more)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
2 P29327 (/HDA) P29327 (/HDA)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
2 P29327 (/TAS) P29327 (/TAS)

There are 42 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Glucose homeostasis GO:0042593
Any process involved in the maintenance of an internal steady state of glucose within an organism or cell.
86 P47838 (/ISS) P62753 (/ISS) P62753 (/ISS) P62753 (/ISS) P62753 (/ISS) P62753 (/ISS) P62753 (/ISS) P62753 (/ISS) P62753 (/ISS) P62753 (/ISS)
(76 more)
RRNA processing GO:0006364
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
80 P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP)
(70 more)
Ribosomal small subunit biogenesis GO:0042274
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis.
80 P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP) P62753 (/IMP)
(70 more)
Ribosomal small subunit assembly GO:0000028
The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the small ribosomal subunit.
40 P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP) P62755 (/IMP)
(30 more)
G1/S transition of mitotic cell cycle GO:0000082
The mitotic cell cycle transition by which a cell in G1 commits to S phase. The process begins with the build up of G1 cyclin-dependent kinase (G1 CDK), resulting in the activation of transcription of G1 cyclins. The process ends with the positive feedback of the G1 cyclins on the G1 CDK which commits the cell to S phase, in which DNA replication is initiated.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
40 P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS)
(30 more)
Mitotic cell cycle GO:0000278
Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
Placenta development GO:0001890
The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
T cell proliferation involved in immune response GO:0002309
The expansion of a T cell population by cell division as part of an immune response.
40 P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI)
(30 more)
T cell proliferation involved in immune response GO:0002309
The expansion of a T cell population by cell division as part of an immune response.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
RRNA processing GO:0006364
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
RRNA processing GO:0006364
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
40 P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS)
(30 more)
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
40 P62753 (/IC) P62753 (/IC) P62753 (/IC) P62753 (/IC) P62753 (/IC) P62753 (/IC) P62753 (/IC) P62753 (/IC) P62753 (/IC) P62753 (/IC)
(30 more)
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
40 P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS)
(30 more)
SRP-dependent cotranslational protein targeting to membrane GO:0006614
The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
40 P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS)
(30 more)
Activation-induced cell death of T cells GO:0006924
A T cell apoptotic process that occurs towards the end of the expansion phase following the initial activation of mature T cells by antigen and is triggered by T cell receptor stimulation and signals transmitted via various surface-expressed members of the TNF receptor family such as Fas ligand, Fas, and TNF and the p55 and p75 TNF receptors.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
Mitotic cell cycle checkpoint GO:0007093
A cell cycle checkpoint that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
Gastrulation GO:0007369
A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.
40 P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI)
(30 more)
Gastrulation GO:0007369
A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
Viral transcription GO:0019083
The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.
40 P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS)
(30 more)
Mammalian oogenesis stage GO:0022605
A reproductive process that is a step in the formation and maturation of an ovum or female gamete from a primordial female germ cell.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
TOR signaling GO:0031929
A series of molecular signals mediated by TOR (Target of rapamycin) proteins, members of the phosphoinositide (PI) 3-kinase related kinase (PIKK) family that act as serine/threonine kinases in response to nutrient availability or growth factors.
40 P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA)
(30 more)
TOR signaling GO:0031929
A series of molecular signals mediated by TOR (Target of rapamycin) proteins, members of the phosphoinositide (PI) 3-kinase related kinase (PIKK) family that act as serine/threonine kinases in response to nutrient availability or growth factors.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Response to insulin GO:0032868
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.
40 P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA)
(30 more)
T cell differentiation in thymus GO:0033077
The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus.
40 P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI) P62754 (/IGI)
(30 more)
T cell differentiation in thymus GO:0033077
The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
Ribosomal small subunit biogenesis GO:0042274
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Glucose homeostasis GO:0042593
Any process involved in the maintenance of an internal steady state of glucose within an organism or cell.
40 P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA)
(30 more)
Positive regulation of apoptotic process GO:0043065
Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
40 P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA)
(30 more)
Positive regulation of apoptotic process GO:0043065
Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Negative regulation of apoptotic process GO:0043066
Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
Erythrocyte development GO:0048821
The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure.
40 P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP) P62754 (/IMP)
(30 more)
Cellular response to ethanol GO:0071361
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus.
40 P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA)
(30 more)
Negative regulation of bicellular tight junction assembly GO:1903347
Any process that stops, prevents or reduces the frequency, rate or extent of tight junction assembly.
40 P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA) P62755 (/IDA)
(30 more)
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
14 P0CX37 (/IC) P0CX37 (/IC) P0CX37 (/IC) P0CX37 (/IC) P0CX37 (/IC) P0CX37 (/IC) P0CX38 (/IC) P0CX38 (/IC) P0CX38 (/IC) P0CX38 (/IC)
(4 more)
Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000462
Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
12 P0CX37 (/IGI) P0CX37 (/IGI) P0CX37 (/IGI) P0CX37 (/IGI) P0CX37 (/IGI) P0CX37 (/IGI) P0CX38 (/IGI) P0CX38 (/IGI) P0CX38 (/IGI) P0CX38 (/IGI)
(2 more)
RRNA methylation GO:0031167
The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.
6 P0CX37 (/TAS) P0CX37 (/TAS) P0CX37 (/TAS) P0CX37 (/TAS) P0CX37 (/TAS) P0CX37 (/TAS)
Cellular response to insulin-like growth factor stimulus GO:1990314
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin-like growth factor stimulus.
6 F2Z5Q6 (/IMP) F2Z5Q6 (/IMP) F2Z5Q6 (/IMP) F2Z5Q6 (/IMP) F2Z5Q6 (/IMP) F2Z5Q6 (/IMP)
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
2 P05752 (/ISO) Q9C0Z7 (/ISO)
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
2 P29327 (/TAS) P29327 (/TAS)
Immune response GO:0006955
Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
2 P29327 (/TAS) P29327 (/TAS)
Ribosome biogenesis GO:0042254
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
2 P05752 (/ISO) Q9C0Z7 (/ISO)

There are 41 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
132 P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX38 (/IDA) P0CX38 (/IDA) P0CX38 (/IDA) P0CX38 (/IDA)
(122 more)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
86 A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R6 (/IDA) A2A3R6 (/IDA) A2A3R6 (/IDA) A2A3R6 (/IDA)
(76 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
86 A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R5 (/IDA) A2A3R6 (/IDA) A2A3R6 (/IDA) A2A3R6 (/IDA) A2A3R6 (/IDA)
(76 more)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
80 P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA)
(70 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
46 F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA)
(36 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
46 P0CX37 (/TAS) P0CX37 (/TAS) P0CX37 (/TAS) P0CX37 (/TAS) P0CX37 (/TAS) P0CX37 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS)
(36 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
46 F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA)
(36 more)
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
46 F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) F2Z5Q6 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA)
(36 more)
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
42 P05752 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(32 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
40 P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA)
(30 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
40 P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA)
(30 more)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
40 P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS) P62753 (/TAS)
(30 more)
Ribosome GO:0005840
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
40 P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA)
(30 more)
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
40 P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA) P62754 (/IDA)
(30 more)
Small ribosomal subunit GO:0015935
The smaller of the two subunits of a ribosome.
40 P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA)
(30 more)
Small ribosomal subunit GO:0015935
The smaller of the two subunits of a ribosome.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
40 P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA)
(30 more)
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
40 P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA) P62753 (/HDA)
(30 more)
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
40 P62753 (/NAS) P62753 (/NAS) P62753 (/NAS) P62753 (/NAS) P62753 (/NAS) P62753 (/NAS) P62753 (/NAS) P62753 (/NAS) P62753 (/NAS) P62753 (/NAS)
(30 more)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
40 P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA)
(30 more)
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Cell body GO:0044297
The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
40 P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA)
(30 more)
Cell body GO:0044297
The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
40 P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA) P62753 (/IDA)
(30 more)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
40 P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO) P62754 (/ISO)
(30 more)
Small-subunit processome GO:0032040
A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.
12 P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX37 (/IDA) P0CX38 (/IDA) P0CX38 (/IDA) P0CX38 (/IDA) P0CX38 (/IDA)
(2 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
6 P47838 (/ISS) Q5E995 (/ISS) Q5E995 (/ISS) Q5E995 (/ISS) Q90YR8 (/ISS) Q9YGF2 (/ISS)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
6 P0CX38 (/HDA) P0CX38 (/HDA) P0CX38 (/HDA) P0CX38 (/HDA) P0CX38 (/HDA) P0CX38 (/HDA)
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
6 P47838 (/ISS) Q5E995 (/ISS) Q5E995 (/ISS) Q5E995 (/ISS) Q90YR8 (/ISS) Q9YGF2 (/ISS)
90S preribosome GO:0030686
A large ribonucleoprotein complex considered to be the earliest preribosomal complex. In S. cerevisiae, it has a size of 90S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.
6 P0CX37 (/HDA) P0CX37 (/HDA) P0CX37 (/HDA) P0CX37 (/HDA) P0CX37 (/HDA) P0CX37 (/HDA)
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
4 Q5E995 (/ISS) Q5E995 (/ISS) Q5E995 (/ISS) Q90YR8 (/ISS)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
2 P05752 (/HDA) Q9C0Z7 (/HDA)
Cell surface GO:0009986
The external part of the cell wall and/or plasma membrane.
2 A0A1D8PL99 (/IDA) A0A1D8PL99 (/IDA)
Cytosolic ribosome GO:0022626
A ribosome located in the cytosol.
2 P29327 (/HDA) P29327 (/HDA)
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
2 P29327 (/TAS) P29327 (/TAS)
Yeast-form cell wall GO:0030445
The wall surrounding a cell of a dimorphic fungus growing in the single-cell budding yeast form, in contrast to the filamentous or hyphal form.
2 A0A1D8PL99 (/IDA) A0A1D8PL99 (/IDA)
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