CATH Superfamily 1.20.5.2440
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 1: RAB11 family interacting protein 4
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 13 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
|
6 | A4IIE8 (/ISS) B3DGU2 (/ISS) Q3LGD4 (/ISS) Q7T005 (/ISS) Q8BQP8 (/ISS) Q8CHD8 (/ISS) |
ADP-ribosylation factor binding GO:0030306
Interacting selectively and non-covalently with ARF, ADP-ribosylation factor, a small monomeric cytosolic GTPase that, when bound to GTP, binds to the membranes of cells.
|
6 | A4IIE8 (/ISS) B3DGU2 (/ISS) Q3LGD4 (/ISS) Q7T005 (/ISS) Q8BQP8 (/ISS) Q8CHD8 (/ISS) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
6 | A4IIE8 (/ISS) B3DGU2 (/ISS) Q3LGD4 (/ISS) Q7T005 (/ISS) Q8BQP8 (/ISS) Q8CHD8 (/ISS) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
4 | O75154 (/IPI) Q86YS3 (/IPI) Q86YS3 (/IPI) Q8CHD8 (/IPI) |
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
|
3 | O75154 (/IPI) Q86YS3 (/IPI) Q86YS3 (/IPI) |
ADP-ribosylation factor binding GO:0030306
Interacting selectively and non-covalently with ARF, ADP-ribosylation factor, a small monomeric cytosolic GTPase that, when bound to GTP, binds to the membranes of cells.
|
3 | O75154 (/IPI) Q86YS3 (/IPI) Q86YS3 (/IPI) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
3 | O75154 (/IDA) Q86YS3 (/IDA) Q86YS3 (/IDA) |
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
|
2 | Q8BQP8 (/ISO) Q8CHD8 (/ISO) |
ADP-ribosylation factor binding GO:0030306
Interacting selectively and non-covalently with ARF, ADP-ribosylation factor, a small monomeric cytosolic GTPase that, when bound to GTP, binds to the membranes of cells.
|
2 | Q8BQP8 (/ISO) Q8CHD8 (/ISO) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
2 | Q8BQP8 (/ISO) Q8CHD8 (/ISO) |
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
|
1 | O75154 (/NAS) |
Dynein light intermediate chain binding GO:0051959
Interacting selectively and non-covalently with a light intermediate chain of the dynein complex.
|
1 | O75154 (/IPI) |
Dynein light intermediate chain binding GO:0051959
Interacting selectively and non-covalently with a light intermediate chain of the dynein complex.
|
1 | Q8CHD8 (/ISO) |
There are 14 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Regulation of cytokinesis GO:0032465
Any process that modulates the frequency, rate or extent of the division of the cytoplasm of a cell and its separation into two daughter cells.
|
6 | A4IIE8 (/ISS) B3DGU2 (/ISS) Q3LGD4 (/ISS) Q7T005 (/ISS) Q8BQP8 (/ISS) Q8CHD8 (/ISS) |
Regulation of cytokinesis GO:0032465
Any process that modulates the frequency, rate or extent of the division of the cytoplasm of a cell and its separation into two daughter cells.
|
3 | O75154 (/IMP) Q86YS3 (/IMP) Q86YS3 (/IMP) |
Endocytic recycling GO:0032456
The directed movement of membrane-bounded vesicles from recycling endosomes back to the plasma membrane where they are recycled for further rounds of transport.
|
2 | Q7T005 (/ISS) Q8CHD8 (/ISS) |
Regulation of cytokinesis GO:0032465
Any process that modulates the frequency, rate or extent of the division of the cytoplasm of a cell and its separation into two daughter cells.
|
2 | Q8BQP8 (/ISO) Q8CHD8 (/ISO) |
Neural retina development GO:0003407
The progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.
|
1 | Q8BQP8 (/IMP) |
Vesicle-mediated transport GO:0016192
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
|
1 | O75154 (/TAS) |
Endocytic recycling GO:0032456
The directed movement of membrane-bounded vesicles from recycling endosomes back to the plasma membrane where they are recycled for further rounds of transport.
|
1 | O75154 (/IDA) |
Endocytic recycling GO:0032456
The directed movement of membrane-bounded vesicles from recycling endosomes back to the plasma membrane where they are recycled for further rounds of transport.
|
1 | Q8CHD8 (/ISO) |
Eye morphogenesis GO:0048592
The process in which the anatomical structures of the eye are generated and organized.
|
1 | Q3LGD4 (/IMP) |
Regulation of cell cycle GO:0051726
Any process that modulates the rate or extent of progression through the cell cycle.
|
1 | Q3LGD4 (/IMP) |
Protein localization to cilium GO:0061512
A process in which a protein is transported to, or maintained in, a location within a cilium.
|
1 | Q8CHD8 (/IMP) |
Negative regulation of adiponectin secretion GO:0070164
Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of adiponectin from a cell.
|
1 | O75154 (/IDA) |
Negative regulation of adiponectin secretion GO:0070164
Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of adiponectin from a cell.
|
1 | Q8CHD8 (/ISO) |
Positive regulation of G1 to G0 transition GO:1903452
Any process that activates or increases the frequency, rate or extent of G1 to G0 transition.
|
1 | Q8BQP8 (/IMP) |
There are 33 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
|
6 | A4IIE8 (/ISS) B3DGU2 (/ISS) Q3LGD4 (/ISS) Q7T005 (/ISS) Q8BQP8 (/ISS) Q8CHD8 (/ISS) |
Midbody GO:0030496
A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis.
|
6 | A4IIE8 (/ISS) B3DGU2 (/ISS) Q3LGD4 (/ISS) Q7T005 (/ISS) Q8BQP8 (/ISS) Q8CHD8 (/ISS) |
Cleavage furrow GO:0032154
The cleavage furrow is a plasma membrane invagination at the cell division site. The cleavage furrow begins as a shallow groove and eventually deepens to divide the cytoplasm.
|
6 | A4IIE8 (/ISS) B3DGU2 (/ISS) Q3LGD4 (/ISS) Q7T005 (/ISS) Q8BQP8 (/ISS) Q8CHD8 (/ISS) |
Endocytic vesicle GO:0030139
A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.
|
4 | A4IIE8 (/ISS) B3DGU2 (/ISS) Q3LGD4 (/ISS) Q8BQP8 (/ISS) |
Recycling endosome membrane GO:0055038
The lipid bilayer surrounding a recycling endosome.
|
4 | A4IIE8 (/ISS) B3DGU2 (/ISS) Q3LGD4 (/ISS) Q8BQP8 (/ISS) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
3 | O75154 (/IDA) X6RFI8 (/IDA) X6RFI8 (/IDA) |
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
|
3 | O75154 (/IDA) Q86YS3 (/IDA) Q86YS3 (/IDA) |
Microtubule organizing center GO:0005815
An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
|
3 | O75154 (/IDA) X6RFI8 (/IDA) X6RFI8 (/IDA) |
Midbody GO:0030496
A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis.
|
3 | O75154 (/IDA) Q86YS3 (/IDA) Q86YS3 (/IDA) |
Cleavage furrow GO:0032154
The cleavage furrow is a plasma membrane invagination at the cell division site. The cleavage furrow begins as a shallow groove and eventually deepens to divide the cytoplasm.
|
3 | O75154 (/IDA) Q86YS3 (/IDA) Q86YS3 (/IDA) |
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
|
3 | O75154 (/IDA) X6RFI8 (/IDA) X6RFI8 (/IDA) |
Intercellular bridge GO:0045171
A direct connection between the cytoplasm of two cells that is formed following the completion of cleavage furrow ingression during cell division. They are usually present only briefly prior to completion of cytokinesis. However, in some cases, such as the bridges between germ cells during their development, they become stabilised.
|
3 | O75154 (/IDA) X6RFI8 (/IDA) X6RFI8 (/IDA) |
Extracellular space GO:0005615
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
|
2 | Q86YS3 (/HDA) Q86YS3 (/HDA) |
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
|
2 | Q8BQP8 (/ISO) Q8CHD8 (/ISO) |
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
|
2 | Q7T005 (/ISS) Q8CHD8 (/ISS) |
Endocytic vesicle GO:0030139
A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.
|
2 | Q86YS3 (/IDA) Q86YS3 (/IDA) |
Midbody GO:0030496
A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis.
|
2 | Q8BQP8 (/ISO) Q8CHD8 (/ISO) |
Cleavage furrow GO:0032154
The cleavage furrow is a plasma membrane invagination at the cell division site. The cleavage furrow begins as a shallow groove and eventually deepens to divide the cytoplasm.
|
2 | Q8BQP8 (/ISO) Q8CHD8 (/ISO) |
Recycling endosome GO:0055037
An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane.
|
2 | Q7T005 (/ISS) Q8CHD8 (/ISS) |
Recycling endosome membrane GO:0055038
The lipid bilayer surrounding a recycling endosome.
|
2 | Q86YS3 (/IDA) Q86YS3 (/IDA) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | Q8CHD8 (/ISO) |
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
|
1 | O75154 (/IDA) |
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
|
1 | Q8CHD8 (/ISO) |
Microtubule organizing center GO:0005815
An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
|
1 | Q8CHD8 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | O75154 (/TAS) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
1 | Q8CHD8 (/IDA) |
Endocytic vesicle GO:0030139
A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.
|
1 | Q8BQP8 (/ISO) |
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
|
1 | Q8CHD8 (/ISO) |
Intercellular bridge GO:0045171
A direct connection between the cytoplasm of two cells that is formed following the completion of cleavage furrow ingression during cell division. They are usually present only briefly prior to completion of cytokinesis. However, in some cases, such as the bridges between germ cells during their development, they become stabilised.
|
1 | Q8CHD8 (/ISO) |
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
|
1 | Q8BQP8 (/IMP) |
Recycling endosome GO:0055037
An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane.
|
1 | O75154 (/IDA) |
Recycling endosome GO:0055037
An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane.
|
1 | Q8CHD8 (/ISO) |
Recycling endosome membrane GO:0055038
The lipid bilayer surrounding a recycling endosome.
|
1 | Q8BQP8 (/ISO) |