CATH Superfamily 1.20.5.1700
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 1: Transforming acidic coiled-coil-containing protein...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 22 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
15 |
A0A0B4JCV4 (/IPI)
A0A0B4JD97 (/IPI)
A0A0B4K6I7 (/IPI)
A0A0B4KFK1 (/IPI)
O75410 (/IPI)
Q86BB4 (/IPI)
Q86BB5 (/IPI)
Q8IPN1 (/IPI)
Q95TU9 (/IPI)
Q9JJ11 (/IPI)
(5 more) |
Microtubule binding GO:0008017
Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
|
11 |
A0A0B4JCV4 (/TAS)
A0A0B4JD97 (/TAS)
A0A0B4K6I7 (/TAS)
A0A0B4KFK1 (/TAS)
Q86BB4 (/TAS)
Q86BB5 (/TAS)
Q8IPN1 (/TAS)
Q95TU9 (/TAS)
Q9NJH5 (/TAS)
Q9VN51 (/TAS)
(1 more) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
3 | Q6Y685 (/IPI) Q9JJ11 (/IPI) Q9JJG0 (/IPI) |
Retinoic acid receptor binding GO:0042974
Interacting selectively and non-covalently with the retinoic acid receptor, a ligand-regulated transcription factor belonging to the nuclear receptor superfamily.
|
2 | O75410 (/IDA) Q6Y685 (/IDA) |
Peroxisome proliferator activated receptor binding GO:0042975
Interacting selectively and non-covalently with any of the peroxisome proliferator activated receptors, alpha, beta or gamma.
|
2 | O75410 (/IDA) Q6Y685 (/IDA) |
Retinoid X receptor binding GO:0046965
Interacting selectively and non-covalently with a retinoid X receptor.
|
2 | O75410 (/IDA) Q6Y685 (/IDA) |
Thyroid hormone receptor binding GO:0046966
Interacting selectively and non-covalently with a thyroid hormone receptor.
|
2 | O75410 (/IDA) Q6Y685 (/IDA) |
Nuclear receptor binding GO:0016922
Interacting selectively and non-covalently, in a ligand dependent manner, with a nuclear receptor protein.
|
1 | O75410 (/IDA) |
Nuclear receptor binding GO:0016922
Interacting selectively and non-covalently, in a ligand dependent manner, with a nuclear receptor protein.
|
1 | Q6Y685 (/ISO) |
Estrogen receptor binding GO:0030331
Interacting selectively and non-covalently with an estrogen receptor.
|
1 | O75410 (/IDA) |
Estrogen receptor binding GO:0030331
Interacting selectively and non-covalently with an estrogen receptor.
|
1 | Q6Y685 (/ISO) |
Estrogen receptor binding GO:0030331
Interacting selectively and non-covalently with an estrogen receptor.
|
1 | Q6Y685 (/ISS) |
Translation initiation factor binding GO:0031369
Interacting selectively and non-covalently with a translation initiation factor, any polypeptide factor involved in the initiation of ribosome-mediated translation.
|
1 | Q9PTG8 (/IPI) |
Nuclear hormone receptor binding GO:0035257
Interacting selectively and non-covalently with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell.
|
1 | O95359 (/IDA) |
Nuclear hormone receptor binding GO:0035257
Interacting selectively and non-covalently with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell.
|
1 | Q9JJG0 (/ISO) |
Glucocorticoid receptor binding GO:0035259
Interacting selectively and non-covalently with a glucocorticoid receptor.
|
1 | O75410 (/IDA) |
Glucocorticoid receptor binding GO:0035259
Interacting selectively and non-covalently with a glucocorticoid receptor.
|
1 | Q6Y685 (/ISO) |
Glucocorticoid receptor binding GO:0035259
Interacting selectively and non-covalently with a glucocorticoid receptor.
|
1 | Q6Y685 (/ISS) |
Retinoic acid receptor binding GO:0042974
Interacting selectively and non-covalently with the retinoic acid receptor, a ligand-regulated transcription factor belonging to the nuclear receptor superfamily.
|
1 | Q6Y685 (/ISO) |
Peroxisome proliferator activated receptor binding GO:0042975
Interacting selectively and non-covalently with any of the peroxisome proliferator activated receptors, alpha, beta or gamma.
|
1 | Q6Y685 (/ISO) |
Retinoid X receptor binding GO:0046965
Interacting selectively and non-covalently with a retinoid X receptor.
|
1 | Q6Y685 (/ISO) |
Thyroid hormone receptor binding GO:0046966
Interacting selectively and non-covalently with a thyroid hormone receptor.
|
1 | Q6Y685 (/ISO) |
There are 31 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Microtubule cytoskeleton organization GO:0000226
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
|
14 |
A0A0B4JCV4 (/IMP)
A0A0B4JD97 (/IMP)
A0A0B4K6I7 (/IMP)
A0A0B4KFK1 (/IMP)
Q6Y685 (/IMP)
Q86BB4 (/IMP)
Q86BB5 (/IMP)
Q8IPN1 (/IMP)
Q95TU9 (/IMP)
Q9JJ11 (/IMP)
(4 more) |
Mitotic cell cycle GO:0000278
Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent.
|
11 |
A0A0B4JCV4 (/IMP)
A0A0B4JD97 (/IMP)
A0A0B4K6I7 (/IMP)
A0A0B4KFK1 (/IMP)
Q86BB4 (/IMP)
Q86BB5 (/IMP)
Q8IPN1 (/IMP)
Q95TU9 (/IMP)
Q9NJH5 (/IMP)
Q9VN51 (/IMP)
(1 more) |
Negative regulation of microtubule depolymerization GO:0007026
Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol.
|
11 |
A0A0B4JCV4 (/NAS)
A0A0B4JD97 (/NAS)
A0A0B4K6I7 (/NAS)
A0A0B4KFK1 (/NAS)
Q86BB4 (/NAS)
Q86BB5 (/NAS)
Q8IPN1 (/NAS)
Q95TU9 (/NAS)
Q9NJH5 (/NAS)
Q9VN51 (/NAS)
(1 more) |
Negative regulation of microtubule depolymerization GO:0007026
Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol.
|
11 |
A0A0B4JCV4 (/TAS)
A0A0B4JD97 (/TAS)
A0A0B4K6I7 (/TAS)
A0A0B4KFK1 (/TAS)
Q86BB4 (/TAS)
Q86BB5 (/TAS)
Q8IPN1 (/TAS)
Q95TU9 (/TAS)
Q9NJH5 (/TAS)
Q9VN51 (/TAS)
(1 more) |
Mitotic spindle organization GO:0007052
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
|
11 |
A0A0B4JCV4 (/TAS)
A0A0B4JD97 (/TAS)
A0A0B4K6I7 (/TAS)
A0A0B4KFK1 (/TAS)
Q86BB4 (/TAS)
Q86BB5 (/TAS)
Q8IPN1 (/TAS)
Q95TU9 (/TAS)
Q9NJH5 (/TAS)
Q9VN51 (/TAS)
(1 more) |
Nuclear migration GO:0007097
The directed movement of the nucleus to a specific location within a cell.
|
11 |
A0A0B4JCV4 (/IMP)
A0A0B4JD97 (/IMP)
A0A0B4K6I7 (/IMP)
A0A0B4KFK1 (/IMP)
Q86BB4 (/IMP)
Q86BB5 (/IMP)
Q8IPN1 (/IMP)
Q95TU9 (/IMP)
Q9NJH5 (/IMP)
Q9VN51 (/IMP)
(1 more) |
Female meiotic nuclear division GO:0007143
A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline.
|
11 |
A0A0B4JCV4 (/TAS)
A0A0B4JD97 (/TAS)
A0A0B4K6I7 (/TAS)
A0A0B4KFK1 (/TAS)
Q86BB4 (/TAS)
Q86BB5 (/TAS)
Q8IPN1 (/TAS)
Q95TU9 (/TAS)
Q9NJH5 (/TAS)
Q9VN51 (/TAS)
(1 more) |
Pole cell formation GO:0007279
Formation of a small group of cells (pole cells) at the posterior pole of the insect blastula. They are the first cells to cellularize after the arrival of nuclei at the end of the syncytial blastula stage and are the precursors to the insect germ cells.
|
11 |
A0A0B4JCV4 (/IMP)
A0A0B4JD97 (/IMP)
A0A0B4K6I7 (/IMP)
A0A0B4KFK1 (/IMP)
Q86BB4 (/IMP)
Q86BB5 (/IMP)
Q8IPN1 (/IMP)
Q95TU9 (/IMP)
Q9NJH5 (/IMP)
Q9VN51 (/IMP)
(1 more) |
Pronuclear fusion GO:0007344
The merging of two pronuclei in a fertilized egg to fuse and produce a single zygotic genome.
|
11 |
A0A0B4JCV4 (/TAS)
A0A0B4JD97 (/TAS)
A0A0B4K6I7 (/TAS)
A0A0B4KFK1 (/TAS)
Q86BB4 (/TAS)
Q86BB5 (/TAS)
Q8IPN1 (/TAS)
Q95TU9 (/TAS)
Q9NJH5 (/TAS)
Q9VN51 (/TAS)
(1 more) |
Protein localization GO:0008104
Any process in which a protein is transported to, or maintained in, a specific location.
|
11 |
A0A0B4JCV4 (/IMP)
A0A0B4JD97 (/IMP)
A0A0B4K6I7 (/IMP)
A0A0B4KFK1 (/IMP)
Q86BB4 (/IMP)
Q86BB5 (/IMP)
Q8IPN1 (/IMP)
Q95TU9 (/IMP)
Q9NJH5 (/IMP)
Q9VN51 (/IMP)
(1 more) |
Protein localization GO:0008104
Any process in which a protein is transported to, or maintained in, a specific location.
|
11 |
A0A0B4JCV4 (/TAS)
A0A0B4JD97 (/TAS)
A0A0B4K6I7 (/TAS)
A0A0B4KFK1 (/TAS)
Q86BB4 (/TAS)
Q86BB5 (/TAS)
Q8IPN1 (/TAS)
Q95TU9 (/TAS)
Q9NJH5 (/TAS)
Q9VN51 (/TAS)
(1 more) |
Pronuclear migration GO:0035046
The directed movement of the male and female pronuclei towards each other prior to their fusion.
|
11 |
A0A0B4JCV4 (/IMP)
A0A0B4JD97 (/IMP)
A0A0B4K6I7 (/IMP)
A0A0B4KFK1 (/IMP)
Q86BB4 (/IMP)
Q86BB5 (/IMP)
Q8IPN1 (/IMP)
Q95TU9 (/IMP)
Q9NJH5 (/IMP)
Q9VN51 (/IMP)
(1 more) |
Cell population proliferation GO:0008283
The multiplication or reproduction of cells, resulting in the expansion of a cell population.
|
3 | Q6Y685 (/IMP) Q9JJ11 (/IMP) Q9JJG0 (/IMP) |
Cerebral cortex development GO:0021987
The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon.
|
3 | Q6Y685 (/IMP) Q9JJ11 (/IMP) Q9JJG0 (/IMP) |
Neurogenesis GO:0022008
Generation of cells within the nervous system.
|
3 | Q6Y685 (/IMP) Q9JJ11 (/IMP) Q9JJG0 (/IMP) |
Interkinetic nuclear migration GO:0022027
The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle.
|
3 | Q6Y685 (/IMP) Q9JJ11 (/IMP) Q9JJG0 (/IMP) |
Regulation of microtubule-based process GO:0032886
Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton.
|
3 | Q6Y685 (/IMP) Q9JJ11 (/IMP) Q9JJG0 (/IMP) |
Astral microtubule organization GO:0030953
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles.
|
2 | Q9JJ11 (/IDA) Q9JJG0 (/IDA) |
Response to hypoxia GO:0001666
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
1 | Q9JJ11 (/IDA) |
Metaphase/anaphase transition of mitotic cell cycle GO:0007091
The cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.
|
1 | Q9Y6A5 (/IMP) |
Metaphase/anaphase transition of mitotic cell cycle GO:0007091
The cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.
|
1 | Q9JJ11 (/ISO) |
Hemopoiesis GO:0030097
The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates.
|
1 | Q9JJ11 (/IMP) |
Cytoplasmic sequestering of transcription factor GO:0042994
The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus.
|
1 | Q9JJ11 (/IDA) |
Regulation of cell cycle GO:0051726
Any process that modulates the rate or extent of progression through the cell cycle.
|
1 | Q9JJ11 (/IGI) |
Regulation of mitotic spindle organization GO:0060236
Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
|
1 | Q9Y6A5 (/IMP) |
Regulation of mitotic spindle organization GO:0060236
Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
|
1 | Q9JJ11 (/ISO) |
Microtubule cytoskeleton organization involved in mitosis GO:1902850
Any microtubule cytoskeleton organization that is involved in mitosis.
|
1 | Q9Y6A5 (/IMP) |
Microtubule cytoskeleton organization involved in mitosis GO:1902850
Any microtubule cytoskeleton organization that is involved in mitosis.
|
1 | Q9JJ11 (/ISO) |
Positive regulation of nuclear receptor transcription coactivator activity GO:2000327
Any process that activates or increases the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.
|
1 | O75410 (/IMP) |
Positive regulation of nuclear receptor transcription coactivator activity GO:2000327
Any process that activates or increases the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.
|
1 | Q6Y685 (/ISO) |
Positive regulation of nuclear receptor transcription coactivator activity GO:2000327
Any process that activates or increases the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.
|
1 | Q6Y685 (/ISS) |
There are 19 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
|
12 |
A0A0B4JCV4 (/IDA)
A0A0B4JD97 (/IDA)
A0A0B4K6I7 (/IDA)
A0A0B4KFK1 (/IDA)
Q86BB4 (/IDA)
Q86BB5 (/IDA)
Q8IPN1 (/IDA)
Q95TU9 (/IDA)
Q9JJ11 (/IDA)
Q9NJH5 (/IDA)
(2 more) |
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
|
12 |
A0A0B4JCV4 (/TAS)
A0A0B4JD97 (/TAS)
A0A0B4K6I7 (/TAS)
A0A0B4KFK1 (/TAS)
Q86BB4 (/TAS)
Q86BB5 (/TAS)
Q8IPN1 (/TAS)
Q95TU9 (/TAS)
Q9JJ11 (/TAS)
Q9NJH5 (/TAS)
(2 more) |
Astral microtubule GO:0000235
Any of the spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.
|
11 |
A0A0B4JCV4 (/TAS)
A0A0B4JD97 (/TAS)
A0A0B4K6I7 (/TAS)
A0A0B4KFK1 (/TAS)
Q86BB4 (/TAS)
Q86BB5 (/TAS)
Q8IPN1 (/TAS)
Q95TU9 (/TAS)
Q9NJH5 (/TAS)
Q9VN51 (/TAS)
(1 more) |
Pericentriolar material GO:0000242
A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome.
|
11 |
A0A0B4JCV4 (/NAS)
A0A0B4JD97 (/NAS)
A0A0B4K6I7 (/NAS)
A0A0B4KFK1 (/NAS)
Q86BB4 (/NAS)
Q86BB5 (/NAS)
Q8IPN1 (/NAS)
Q95TU9 (/NAS)
Q9NJH5 (/NAS)
Q9VN51 (/NAS)
(1 more) |
Spindle pole GO:0000922
Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.
|
11 |
A0A0B4JCV4 (/IDA)
A0A0B4JD97 (/IDA)
A0A0B4K6I7 (/IDA)
A0A0B4KFK1 (/IDA)
Q86BB4 (/IDA)
Q86BB5 (/IDA)
Q8IPN1 (/IDA)
Q95TU9 (/IDA)
Q9NJH5 (/IDA)
Q9VN51 (/IDA)
(1 more) |
Spindle microtubule GO:0005876
Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole.
|
11 |
A0A0B4JCV4 (/TAS)
A0A0B4JD97 (/TAS)
A0A0B4K6I7 (/TAS)
A0A0B4KFK1 (/TAS)
Q86BB4 (/TAS)
Q86BB5 (/TAS)
Q8IPN1 (/TAS)
Q95TU9 (/TAS)
Q9NJH5 (/TAS)
Q9VN51 (/TAS)
(1 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
7 | D6RAA5 (/IDA) E7EMZ9 (/IDA) E9PBC6 (/IDA) O95359 (/IDA) Q4VXL4 (/IDA) Q4VXL8 (/IDA) Q9Y6A5 (/IDA) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
6 | D6RAA5 (/IDA) E7EMZ9 (/IDA) E9PBC6 (/IDA) O95359 (/IDA) Q4VXL4 (/IDA) Q4VXL8 (/IDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
6 | D6RAA5 (/IDA) E7EMZ9 (/IDA) E9PBC6 (/IDA) O95359 (/IDA) Q4VXL4 (/IDA) Q4VXL8 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
2 | Q9JJ11 (/ISO) Q9JJG0 (/ISO) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | Q9JJG0 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
1 | Q9JJ11 (/IDA) |
Microtubule organizing center GO:0005815
An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
|
1 | Q9Y6A5 (/IDA) |
Microtubule organizing center GO:0005815
An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
|
1 | Q9JJ11 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | Q9JJ11 (/TAS) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
1 | Q9JJG0 (/ISO) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
1 | Q9PTG8 (/IPI) |
Mitotic spindle GO:0072686
A spindle that forms as part of mitosis. Mitotic and meiotic spindles contain distinctive complements of proteins associated with microtubules.
|
1 | Q9Y6A5 (/IDA) |
Mitotic spindle GO:0072686
A spindle that forms as part of mitosis. Mitotic and meiotic spindles contain distinctive complements of proteins associated with microtubules.
|
1 | Q9JJ11 (/ISO) |