The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: microtubule-associated protein RP/EB family member...

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 11 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Microtubule plus-end binding GO:0051010
Interacting selectively and non-covalently with the plus end of a microtubule.
12 Q2XVP5 (/ISS) Q3ZBD9 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5ZLC7 (/ISS) Q61166 (/ISS) Q61166 (/ISS) Q66T82 (/ISS)
(2 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
6 Q15691 (/IPI) Q15691 (/IPI) Q15691 (/IPI) Q61166 (/IPI) Q61166 (/IPI) Q9GRZ1 (/IPI)
Microtubule plus-end binding GO:0051010
Interacting selectively and non-covalently with the plus end of a microtubule.
4 Q15691 (/IDA) Q15691 (/IDA) Q15691 (/IDA) Q66HR2 (/IDA)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
3 Q15691 (/HDA) Q15691 (/HDA) Q15691 (/HDA)
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
3 Q15691 (/TAS) Q15691 (/TAS) Q15691 (/TAS)
Protein kinase binding GO:0019901
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
3 Q15691 (/IPI) Q15691 (/IPI) Q15691 (/IPI)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
3 Q15691 (/IPI) Q15691 (/IPI) Q15691 (/IPI)
Cadherin binding GO:0045296
Interacting selectively and non-covalently with cadherin, a type I membrane protein involved in cell adhesion.
3 Q15691 (/HDA) Q15691 (/HDA) Q15691 (/HDA)
Protein kinase binding GO:0019901
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
2 Q61166 (/ISO) Q61166 (/ISO)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
2 Q61166 (/ISO) Q61166 (/ISO)
Microtubule plus-end binding GO:0051010
Interacting selectively and non-covalently with the plus end of a microtubule.
2 Q61166 (/ISO) Q61166 (/ISO)

There are 18 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Negative regulation of microtubule polymerization GO:0031115
Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization.
12 Q2XVP5 (/ISS) Q3ZBD9 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5ZLC7 (/ISS) Q61166 (/ISS) Q61166 (/ISS) Q66T82 (/ISS)
(2 more)
Protein localization to microtubule GO:0035372
A process in which a protein is transported to, or maintained at, a microtubule.
12 Q3ZBD9 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5ZLC7 (/ISS) Q61166 (/ISS) Q61166 (/ISS) Q66HR2 (/ISS) Q66T82 (/ISS)
(2 more)
G2/M transition of mitotic cell cycle GO:0000086
The mitotic cell cycle transition by which a cell in G2 commits to M phase. The process begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed. This is accomplished by activating a positive feedback loop that results in the accumulation of unphosphorylated and active M cyclin/CDK complex.
3 Q15691 (/TAS) Q15691 (/TAS) Q15691 (/TAS)
Protein localization GO:0008104
Any process in which a protein is transported to, or maintained in, a specific location.
3 Q15691 (/TAS) Q15691 (/TAS) Q15691 (/TAS)
Regulation of G2/M transition of mitotic cell cycle GO:0010389
Any signalling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.
3 Q15691 (/TAS) Q15691 (/TAS) Q15691 (/TAS)
Cell migration GO:0016477
The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. Cell migration is a central process in the development and maintenance of multicellular organisms.
3 Q15691 (/IMP) Q15691 (/IMP) Q15691 (/IMP)
Positive regulation of cell migration GO:0030335
Any process that activates or increases the frequency, rate or extent of cell migration.
3 Q15691 (/TAS) Q15691 (/TAS) Q15691 (/TAS)
Negative regulation of microtubule polymerization GO:0031115
Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization.
3 Q15691 (/IDA) Q15691 (/IDA) Q15691 (/IDA)
Positive regulation of microtubule polymerization GO:0031116
Any process that activates or increases the frequency, rate or extent of microtubule polymerization.
3 Q15691 (/IMP) Q15691 (/IMP) Q15691 (/IMP)
Protein localization to microtubule GO:0035372
A process in which a protein is transported to, or maintained at, a microtubule.
3 Q15691 (/IDA) Q15691 (/IDA) Q15691 (/IDA)
Ciliary basal body-plasma membrane docking GO:0097711
The docking of a cytosolic centriole/basal body to the plasma membrane via the ciliary transition fibers. In some species this may happen via an intermediate step, by first docking to the ciliary vesicle via the ciliary transition fibers. The basal body-ciliary vesicle then relocates to the plasma membrane, followed by the ciliary vesicle fusing with the plasma membrane, effectively attaching the basal body to the plasma membrane.
3 Q15691 (/TAS) Q15691 (/TAS) Q15691 (/TAS)
Cell migration GO:0016477
The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. Cell migration is a central process in the development and maintenance of multicellular organisms.
2 Q61166 (/ISO) Q61166 (/ISO)
Negative regulation of microtubule polymerization GO:0031115
Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization.
2 Q61166 (/ISO) Q61166 (/ISO)
Positive regulation of microtubule polymerization GO:0031116
Any process that activates or increases the frequency, rate or extent of microtubule polymerization.
2 Q61166 (/ISO) Q61166 (/ISO)
Protein localization to microtubule GO:0035372
A process in which a protein is transported to, or maintained at, a microtubule.
2 Q61166 (/IMP) Q61166 (/IMP)
Protein localization to microtubule GO:0035372
A process in which a protein is transported to, or maintained at, a microtubule.
2 Q61166 (/ISO) Q61166 (/ISO)
Positive regulation of microtubule plus-end binding GO:1903033
Any process that activates or increases the frequency, rate or extent of microtubule plus-end binding.
2 Q61166 (/IDA) Q61166 (/IDA)
Positive regulation of microtubule plus-end binding GO:1903033
Any process that activates or increases the frequency, rate or extent of microtubule plus-end binding.
2 Q61166 (/IGI) Q61166 (/IGI)

There are 22 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Microtubule GO:0005874
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
13 Q2XVP5 (/ISS) Q3ZBD9 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5ZLC7 (/ISS) Q61166 (/ISS) Q61166 (/ISS) Q66HR2 (/ISS)
(3 more)
Cortical microtubule cytoskeleton GO:0030981
The portion of the microtubule cytoskeleton that lies just beneath the plasma membrane.
12 Q2XVP5 (/ISS) Q3ZBD9 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5R7Z5 (/ISS) Q5ZLC7 (/ISS) Q61166 (/ISS) Q61166 (/ISS) Q66T82 (/ISS)
(2 more)
Microtubule GO:0005874
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
5 Q15691 (/IDA) Q15691 (/IDA) Q15691 (/IDA) Q61166 (/IDA) Q61166 (/IDA)
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
4 Q15691 (/IDA) Q15691 (/IDA) Q15691 (/IDA) Q9GRZ1 (/IDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
4 A0A060XAD6 (/ISS) A0A060XT87 (/ISS) B5DG69 (/ISS) Q6NUY9 (/ISS)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
3 Q15691 (/TAS) Q15691 (/TAS) Q15691 (/TAS)
Focal adhesion GO:0005925
Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
3 Q15691 (/IDA) Q15691 (/IDA) Q15691 (/IDA)
Cortical microtubule cytoskeleton GO:0030981
The portion of the microtubule cytoskeleton that lies just beneath the plasma membrane.
3 Q15691 (/IDA) Q15691 (/IDA) Q15691 (/IDA)
Mitotic spindle astral microtubule end GO:1905721
Any microtubule end that is part of a mitotic spindle astral microtubule.
3 Q15691 (/IDA) Q15691 (/IDA) Q15691 (/IDA)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
2 Q61166 (/IDA) Q61166 (/IDA)
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
2 Q61166 (/ISO) Q61166 (/ISO)
Microtubule GO:0005874
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
2 Q61166 (/ISO) Q61166 (/ISO)
Focal adhesion GO:0005925
Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
2 Q61166 (/ISO) Q61166 (/ISO)
Microtubule cytoskeleton GO:0015630
The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins.
2 Q61166 (/IDA) Q61166 (/IDA)
Cortical microtubule cytoskeleton GO:0030981
The portion of the microtubule cytoskeleton that lies just beneath the plasma membrane.
2 Q61166 (/ISO) Q61166 (/ISO)
Cell projection membrane GO:0031253
The portion of the plasma membrane surrounding a plasma membrane bounded cell surface projection.
2 Q61166 (/IDA) Q61166 (/IDA)
Cell projection GO:0042995
A prolongation or process extending from a cell, e.g. a flagellum or axon.
2 Q61166 (/IDA) Q61166 (/IDA)
Mitotic spindle astral microtubule end GO:1905721
Any microtubule end that is part of a mitotic spindle astral microtubule.
2 Q61166 (/ISO) Q61166 (/ISO)
Astral microtubule GO:0000235
Any of the spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.
1 Q9GRZ1 (/IDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
1 Q9W6M6 (/IDA)
Cell cortex GO:0005938
The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
1 Q9GRZ1 (/IDA)
Microtubule plus-end GO:0035371
The growing (plus) end of a microtubule. In vitro, microtubules polymerize more quickly at the plus end than at the minus end. In vivo, microtubule growth occurs only at the plus end, and the plus end switches between periods of growth and shortening, a behavior known as dynamic instability.
1 Q9GRZ1 (/IDA)
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