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CATH Superfamily 1.20.120.910

DksA, coiled-coil domain

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
DksA, coiled-coil domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: RNA polymerase-binding transcription factor DksA

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 1 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
RNA polymerase binding GO:0070063
Interacting selectively and non-covalently with an RNA polymerase molecule or complex.
 28 G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA)
(18 more)

There are 6 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Negative regulation of proteolysis GO:0045861
Any process that stops, prevents, or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.
 28 G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA)
(18 more)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
 28 G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP)
(18 more)
Negative regulation of lipid biosynthetic process GO:0051055
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.
 28 G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA) G3XD14 (/IDA)
(18 more)
Positive regulation of cellular respiration GO:1901857
Any process that activates or increases the frequency, rate or extent of cellular respiration.
 28 G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP)
(18 more)
Positive regulation of transcription regulatory region DNA binding GO:2000679
Any process that activates or increases the frequency, rate or extent of transcription regulatory region DNA binding.
 28 G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP) G3XD14 (/IMP)
(18 more)
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
 14 Q9KKG5 (/IMP) Q9KKG5 (/IMP) Q9KKG5 (/IMP) Q9KKG5 (/IMP) Q9KKG5 (/IMP) Q9KKG5 (/IMP) Q9KKG5 (/IMP) Q9KKG5 (/IMP) Q9KKG5 (/IMP) Q9KKG5 (/IMP)
(4 more)

There are 2 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
 195 P0ABS1 (/HDA) P0ABS1 (/HDA) P0ABS1 (/HDA) P0ABS1 (/HDA) P0ABS1 (/HDA) P0ABS1 (/HDA) P0ABS1 (/HDA) P0ABS1 (/HDA) P0ABS1 (/HDA) P0ABS1 (/HDA)
(185 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
 195 P0ABS1 (/IDA) P0ABS1 (/IDA) P0ABS1 (/IDA) P0ABS1 (/IDA) P0ABS1 (/IDA) P0ABS1 (/IDA) P0ABS1 (/IDA) P0ABS1 (/IDA) P0ABS1 (/IDA) P0ABS1 (/IDA)
(185 more)