The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"SOCS box
".
FunFam 1: Ankyrin repeat and SOCS box containing 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 10 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
26 |
A1Z6E0 (/IPI)
A1Z6E0 (/IPI)
O88838 (/IPI)
Q8R5B6 (/IPI)
Q8R5B6 (/IPI)
Q8WXK3 (/IPI)
Q91ZT8 (/IPI)
Q96A44 (/IPI)
Q96A44 (/IPI)
Q96A44 (/IPI)
(16 more) |
Protein binding, bridging involved in substrate recognition for ubiquitination GO:1990756
The binding activity of a molecule that brings together a ubiquitin ligase and its substrate. Usually mediated by F-box BTB/POZ domain proteins.
|
8 | Q5E9X6 (/ISS) Q5E9X6 (/ISS) Q5E9X6 (/ISS) Q5M877 (/ISS) Q8R5B6 (/ISS) Q8R5B6 (/ISS) Q9D5L7 (/ISS) Q9D5L7 (/ISS) |
Protein binding, bridging involved in substrate recognition for ubiquitination GO:1990756
The binding activity of a molecule that brings together a ubiquitin ligase and its substrate. Usually mediated by F-box BTB/POZ domain proteins.
|
6 | Q96A44 (/IPI) Q96A44 (/IPI) Q96A44 (/IPI) Q96BD6 (/IPI) Q96BD6 (/IPI) Q99619 (/IPI) |
Protein binding, bridging involved in substrate recognition for ubiquitination GO:1990756
The binding activity of a molecule that brings together a ubiquitin ligase and its substrate. Usually mediated by F-box BTB/POZ domain proteins.
|
5 | O88838 (/ISO) Q8R5B6 (/ISO) Q8R5B6 (/ISO) Q9D5L7 (/ISO) Q9D5L7 (/ISO) |
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
3 | Q9Y574 (/ISS) Q9Y574 (/ISS) Q9Y574 (/ISS) |
Ubiquitin protein ligase binding GO:0031625
Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.
|
3 | Q9Y574 (/ISS) Q9Y574 (/ISS) Q9Y574 (/ISS) |
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
1 | Q9WV71 (/IDA) |
Enzyme binding GO:0019899
Interacting selectively and non-covalently with any enzyme.
|
1 | Q9WV71 (/IPI) |
Ubiquitin protein ligase binding GO:0031625
Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.
|
1 | Q9WV71 (/IDA) |
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
|
1 | Q9WV71 (/IDA) |
There are 41 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Post-translational protein modification GO:0043687
The process of covalently altering one or more amino acids in a protein after the protein has been completely translated and released from the ribosome.
|
42 |
A6NK59 (/TAS)
Q6ZVZ8 (/TAS)
Q8WWX0 (/TAS)
Q8WWX0 (/TAS)
Q8WWX0 (/TAS)
Q8WWX0 (/TAS)
Q8WXH4 (/TAS)
Q8WXK1 (/TAS)
Q8WXK1 (/TAS)
Q8WXK3 (/TAS)
(32 more) |
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
|
13 |
O88838 (/IDA)
Q96A44 (/IDA)
Q96A44 (/IDA)
Q96A44 (/IDA)
Q96BD6 (/IDA)
Q96BD6 (/IDA)
Q96DX5 (/IDA)
Q96DX5 (/IDA)
Q96Q27 (/IDA)
Q99619 (/IDA)
(3 more) |
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
|
9 | O88838 (/ISO) Q8K0L0 (/ISO) Q8R5B6 (/ISO) Q8R5B6 (/ISO) Q91ZT8 (/ISO) Q9D5L7 (/ISO) Q9D5L7 (/ISO) Q9WV74 (/ISO) Q9WV74 (/ISO) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
8 | Q5E9X6 (/ISS) Q5E9X6 (/ISS) Q5E9X6 (/ISS) Q5M877 (/ISS) Q8R5B6 (/ISS) Q8R5B6 (/ISS) Q9D5L7 (/ISS) Q9D5L7 (/ISS) |
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
|
8 | Q5E9X6 (/ISS) Q5E9X6 (/ISS) Q5E9X6 (/ISS) Q5M877 (/ISS) Q8R5B6 (/ISS) Q8R5B6 (/ISS) Q9D5L7 (/ISS) Q9D5L7 (/ISS) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
6 | Q96A44 (/IDA) Q96A44 (/IDA) Q96A44 (/IDA) Q96BD6 (/IDA) Q96BD6 (/IDA) Q99619 (/IDA) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
5 | O88838 (/ISO) Q8R5B6 (/ISO) Q8R5B6 (/ISO) Q9D5L7 (/ISO) Q9D5L7 (/ISO) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
4 | O88838 (/IMP) Q96A44 (/IMP) Q96A44 (/IMP) Q96A44 (/IMP) |
Positive regulation of transcription of Notch receptor target GO:0007221
The activation of transcription of specific genes as a result of Notch signaling, mediated by the Notch intracellular domain.
|
4 | A1L1Z0 (/IMP) Q1ED15 (/IMP) Q503N0 (/IMP) Q70X92 (/IMP) |
Positive regulation of Notch signaling pathway GO:0045747
Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway.
|
4 | A1L1Z0 (/IDA) Q1ED15 (/IDA) Q503N0 (/IDA) Q70X92 (/IDA) |
Negative regulation of cytokine biosynthetic process GO:0042036
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines.
|
3 | Q9Y576 (/NAS) Q9Y576 (/NAS) Q9Y576 (/NAS) |
Regulation of circadian rhythm GO:0042752
Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.
|
3 | Q96A44 (/IMP) Q96A44 (/IMP) Q96A44 (/IMP) |
Protein autoubiquitination GO:0051865
The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.
|
3 | Q9Y574 (/ISS) Q9Y574 (/ISS) Q9Y574 (/ISS) |
Positive regulation of protein polyubiquitination GO:1902916
Any process that activates or increases the frequency, rate or extent of protein polyubiquitination.
|
3 | Q96A44 (/IDA) Q96A44 (/IDA) Q96A44 (/IDA) |
Positive regulation of vasculogenesis GO:2001214
Any process that activates or increases the frequency, rate or extent of vasculogenesis.
|
3 | Q9Y574 (/ISS) Q9Y574 (/ISS) Q9Y574 (/ISS) |
Protein polyubiquitination GO:0000209
Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
|
2 | Q96BD6 (/TAS) Q96BD6 (/TAS) |
Pole cell migration GO:0007280
The directed movement of a pole cell (germline progenitors in insects) from its site of production at the posterior pole of the embryo through to the site where the gonads will form.
|
2 | A1Z6E0 (/IMP) A1Z6E0 (/IMP) |
Germ cell development GO:0007281
The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
|
2 | A1Z6E0 (/IMP) A1Z6E0 (/IMP) |
Oocyte anterior/posterior axis specification GO:0007314
Polarization of the oocyte along its anterior-posterior axis. An example of this is found in Drosophila melanogaster.
|
2 | A1Z6E0 (/IMP) A1Z6E0 (/IMP) |
Pole plasm assembly GO:0007315
Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.
|
2 | A1Z6E0 (/IMP) A1Z6E0 (/IMP) |
Wing disc morphogenesis GO:0007472
The process in which the anatomical structures derived from the wing disc are generated and organized. This includes the transformation of a wing imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the wing hinge, wing blade and pleura.
|
2 | A1Z6E0 (/IMP) A1Z6E0 (/IMP) |
Sensory perception of sound GO:0007605
The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound.
|
2 | Q7KRT4 (/IMP) Q9VA06 (/IMP) |
Protein localization GO:0008104
Any process in which a protein is transported to, or maintained in, a specific location.
|
2 | A1Z6E0 (/IMP) A1Z6E0 (/IMP) |
Deactivation of rhodopsin mediated signaling GO:0016059
The process of restoring the photoreceptor cell to its unexcited state after termination of the stimulus (photon).
|
2 | Q7KRT4 (/IMP) Q9VA06 (/IMP) |
Male genitalia development GO:0030539
The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure.
|
2 | Q9WV74 (/IMP) Q9WV74 (/IMP) |
Cuticle pattern formation GO:0035017
The regionalization process that gives rise to the patterns of cell differentiation in the cuticle.
|
2 | A1Z6E0 (/IMP) A1Z6E0 (/IMP) |
Regulation of circadian rhythm GO:0042752
Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.
|
2 | Q8R5B6 (/ISO) Q8R5B6 (/ISO) |
Positive regulation of protein catabolic process GO:0045732
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
|
2 | Q96DX5 (/IDA) Q96DX5 (/IDA) |
Positive regulation of protein catabolic process GO:0045732
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
|
2 | A1Z6E0 (/IMP) A1Z6E0 (/IMP) |
Dorsal appendage formation GO:0046843
Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.
|
2 | A1Z6E0 (/IMP) A1Z6E0 (/IMP) |
Cardiac myofibril assembly GO:0055003
The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells.
|
2 | A0A0R4IA11 (/IGI) Q6NWY5 (/IGI) |
Cardiac myofibril assembly GO:0055003
The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells.
|
2 | A0A0R4IA11 (/IMP) Q6NWY5 (/IMP) |
Cardiac muscle cell development GO:0055013
The process whose specific outcome is the progression of a cardiac muscle cell over time, from its formation to the mature state.
|
2 | A0A0R4IA11 (/IGI) Q6NWY5 (/IGI) |
Cardiac muscle cell development GO:0055013
The process whose specific outcome is the progression of a cardiac muscle cell over time, from its formation to the mature state.
|
2 | A0A0R4IA11 (/IMP) Q6NWY5 (/IMP) |
Positive regulation of protein polyubiquitination GO:1902916
Any process that activates or increases the frequency, rate or extent of protein polyubiquitination.
|
2 | Q8R5B6 (/ISO) Q8R5B6 (/ISO) |
Positive regulation of protein polyubiquitination GO:1902916
Any process that activates or increases the frequency, rate or extent of protein polyubiquitination.
|
2 | Q8R5B6 (/ISS) Q8R5B6 (/ISS) |
Signal transduction GO:0007165
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
|
1 | Q96Q27 (/TAS) |
Skeletal muscle cell differentiation GO:0035914
The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle cell, a somatic cell located in skeletal muscle.
|
1 | Q8K0L0 (/IMP) |
Positive regulation of protein catabolic process GO:0045732
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
|
1 | Q91ZT8 (/ISO) |
Protein autoubiquitination GO:0051865
The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.
|
1 | Q9WV71 (/IDA) |
Positive regulation of vasculogenesis GO:2001214
Any process that activates or increases the frequency, rate or extent of vasculogenesis.
|
1 | Q9WV71 (/IDA) |
There are 18 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
42 |
A6NK59 (/TAS)
Q6ZVZ8 (/TAS)
Q8WWX0 (/TAS)
Q8WWX0 (/TAS)
Q8WWX0 (/TAS)
Q8WWX0 (/TAS)
Q8WXH4 (/TAS)
Q8WXK1 (/TAS)
Q8WXK1 (/TAS)
Q8WXK3 (/TAS)
(32 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
9 | O88838 (/ISS) Q5E9X6 (/ISS) Q5E9X6 (/ISS) Q5E9X6 (/ISS) Q5M877 (/ISS) Q8R5B6 (/ISS) Q8R5B6 (/ISS) Q9D5L7 (/ISS) Q9D5L7 (/ISS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
6 | Q96A44 (/IDA) Q96A44 (/IDA) Q96A44 (/IDA) Q96BD6 (/IDA) Q96BD6 (/IDA) Q99619 (/IDA) |
Cul5-RING ubiquitin ligase complex GO:0031466
A ubiquitin ligase complex in which a cullin from the Cul5 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.
|
6 | A1Z6E0 (/IDA) A1Z6E0 (/IDA) Q9WV71 (/IDA) Q9Y574 (/IDA) Q9Y574 (/IDA) Q9Y574 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
5 | O88838 (/ISO) Q8R5B6 (/ISO) Q8R5B6 (/ISO) Q9D5L7 (/ISO) Q9D5L7 (/ISO) |
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
|
4 | Q96Q27 (/IDA) Q9Y576 (/IDA) Q9Y576 (/IDA) Q9Y576 (/IDA) |
Cul2-RING ubiquitin ligase complex GO:0031462
A ubiquitin ligase complex in which a cullin from the Cul2 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.
|
4 | Q9WV71 (/IDA) Q9Y574 (/IDA) Q9Y574 (/IDA) Q9Y574 (/IDA) |
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
|
3 | Q8K0L0 (/ISO) Q9WV74 (/ISO) Q9WV74 (/ISO) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | A1Z6E0 (/IDA) A1Z6E0 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
2 | A1Z6E0 (/IDA) A1Z6E0 (/IDA) |
Cell cortex GO:0005938
The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
|
2 | A1Z6E0 (/IDA) A1Z6E0 (/IDA) |
Pole plasm GO:0045495
Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.
|
2 | A1Z6E0 (/IDA) A1Z6E0 (/IDA) |
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
|
2 | A1Z6E0 (/IDA) A1Z6E0 (/IDA) |
Elongin complex GO:0070449
A transcription elongation factor complex that suppresses RNA polymerase II pausing, and may act by promoting proper alignment of the 3'-end of nascent transcripts with the polymerase catalytic site. Consists of a transcriptionally active Elongin A subunit (abut 100 kDa)and two smaller Elongin B (about 18 kDa) and Elongin C (about 15 kDa)subunits.
|
2 | A1Z6E0 (/IDA) A1Z6E0 (/IDA) |
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
|
1 | Q8WXH4 (/IDA) |
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
|
1 | Q9CQ31 (/ISO) |
Cul2-RING ubiquitin ligase complex GO:0031462
A ubiquitin ligase complex in which a cullin from the Cul2 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.
|
1 | Q9WV71 (/ISO) |
Cul5-RING ubiquitin ligase complex GO:0031466
A ubiquitin ligase complex in which a cullin from the Cul5 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.
|
1 | Q9WV71 (/ISO) |