The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Ribosomal protein S7 domain
".
FunFam 3: 40S ribosomal protein S5
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
55 |
P24050 (/IPI)
P46782 (/IPI)
P46782 (/IPI)
P46782 (/IPI)
P46782 (/IPI)
P46782 (/IPI)
P46782 (/IPI)
P46782 (/IPI)
P46782 (/IPI)
P46782 (/IPI)
(45 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
54 |
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
(44 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
54 |
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
(44 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
54 |
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
(44 more) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
54 |
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
(44 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
1 | P97461 (/ISO) |
There are 11 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
|
54 |
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
(44 more) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
54 |
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
(44 more) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
54 |
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
(44 more) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
54 |
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
P46782 (/NAS)
(44 more) |
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
|
54 |
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
P46782 (/IC)
(44 more) |
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
|
54 |
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
(44 more) |
Regulation of translational fidelity GO:0006450
Any process that modulates the ability of the translational apparatus to interpret the genetic code.
|
54 |
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
P46782 (/IGI)
(44 more) |
SRP-dependent cotranslational protein targeting to membrane GO:0006614
The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
|
54 |
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
(44 more) |
Viral transcription GO:0019083
The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.
|
54 |
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
(44 more) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
1 | P97461 (/ISO) |
Regulation of translational fidelity GO:0006450
Any process that modulates the ability of the translational apparatus to interpret the genetic code.
|
1 | P97461 (/ISO) |
There are 11 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
|
56 |
P24050 (/ISS)
P97461 (/ISS)
Q5E988 (/ISS)
Q5E988 (/ISS)
Q5E988 (/ISS)
Q5E988 (/ISS)
Q5E988 (/ISS)
Q5E988 (/ISS)
Q5E988 (/ISS)
Q5E988 (/ISS)
(46 more) |
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
|
55 |
P24050 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
(45 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
54 |
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
(44 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
54 |
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
P46782 (/TAS)
(44 more) |
Focal adhesion GO:0005925
Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
|
54 |
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
(44 more) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
54 |
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
(44 more) |
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
|
54 |
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
(44 more) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
54 |
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
P46782 (/HDA)
(44 more) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
54 |
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
P46782 (/IDA)
(44 more) |
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
|
1 | P97461 (/ISO) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
1 | P97461 (/ISO) |