The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Homeodomain-like
".
FunFam 355: Transcription factor MYB124
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
5 | F4IRB4 (/ISS) Q94FL6 (/ISS) Q94FL6 (/ISS) Q9S754 (/ISS) Q9SPH0 (/ISS) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
3 | F4IRB4 (/IDA) Q94FL6 (/IDA) Q94FL6 (/IDA) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
3 | F4IRB4 (/IPI) Q94FL6 (/IPI) Q94FL6 (/IPI) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
3 | F4IRB4 (/IDA) Q94FL6 (/IDA) Q94FL6 (/IDA) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
3 | G5EAY5 (/IDA) G5EAY5 (/IDA) G5EAY5 (/IDA) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
2 | Q94FL6 (/IPI) Q94FL6 (/IPI) |
Showing 1 to 6 of 6 entries
There are 31 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | F4IRB4 (/IDA) Q94FL6 (/IDA) Q94FL6 (/IDA) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Cellular response to nitrogen starvation GO:0006995
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nitrogen.
|
3 | G5EAY5 (/IMP) G5EAY5 (/IMP) G5EAY5 (/IMP) |
Embryo sac development GO:0009553
The process whose specific outcome is the progression of the embryo sac over time, from its formation to the mature structure. The process begins with the meiosis of the megasporocyte to form four haploid megaspores. Three of the megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center. The two polar nuclei fuse resulting in a mononucleate diploid endosperm mother cell. The three antipodal cells degenerate.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Megasporogenesis GO:0009554
The process in which the megasporocyte undergoes meiosis, giving rise to four haploid megaspores in the nucellus.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Response to gravity GO:0009629
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Response to abscisic acid GO:0009737
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Guard cell differentiation GO:0010052
The process in which a guard mother cell acquires the specialized features of a guard cell.
|
3 | F4IRB4 (/IGI) Q94FL6 (/IGI) Q94FL6 (/IGI) |
Guard mother cell cytokinesis GO:0010235
The stereotyped symmetric cell division by which guard mother cell give rise to stomatal guard cells.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Stomatal complex formation GO:0010376
The process that gives rise to the stomatal complex. This process pertains to the initial formation of a structure from unspecified parts. The stomatal complex is the stomatal guard cells and their associated epidermal cells.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Showing 1 to 10 of 31 entries
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
6 | F4IRB4 (/IDA) G5EAY5 (/IDA) G5EAY5 (/IDA) G5EAY5 (/IDA) Q94FL6 (/IDA) Q94FL6 (/IDA) |
Showing 1 to 1 of 1 entries