The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Homeodomain-like
".
FunFam 355: Transcription factor MYB124
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
5 | F4IRB4 (/ISS) Q94FL6 (/ISS) Q94FL6 (/ISS) Q9S754 (/ISS) Q9SPH0 (/ISS) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
3 | F4IRB4 (/IDA) Q94FL6 (/IDA) Q94FL6 (/IDA) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
3 | F4IRB4 (/IPI) Q94FL6 (/IPI) Q94FL6 (/IPI) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
3 | F4IRB4 (/IDA) Q94FL6 (/IDA) Q94FL6 (/IDA) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
3 | G5EAY5 (/IDA) G5EAY5 (/IDA) G5EAY5 (/IDA) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
2 | Q94FL6 (/IPI) Q94FL6 (/IPI) |
There are 31 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | F4IRB4 (/IDA) Q94FL6 (/IDA) Q94FL6 (/IDA) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Cellular response to nitrogen starvation GO:0006995
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nitrogen.
|
3 | G5EAY5 (/IMP) G5EAY5 (/IMP) G5EAY5 (/IMP) |
Embryo sac development GO:0009553
The process whose specific outcome is the progression of the embryo sac over time, from its formation to the mature structure. The process begins with the meiosis of the megasporocyte to form four haploid megaspores. Three of the megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center. The two polar nuclei fuse resulting in a mononucleate diploid endosperm mother cell. The three antipodal cells degenerate.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Megasporogenesis GO:0009554
The process in which the megasporocyte undergoes meiosis, giving rise to four haploid megaspores in the nucellus.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Response to gravity GO:0009629
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Response to abscisic acid GO:0009737
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Guard cell differentiation GO:0010052
The process in which a guard mother cell acquires the specialized features of a guard cell.
|
3 | F4IRB4 (/IGI) Q94FL6 (/IGI) Q94FL6 (/IGI) |
Guard mother cell cytokinesis GO:0010235
The stereotyped symmetric cell division by which guard mother cell give rise to stomatal guard cells.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Stomatal complex formation GO:0010376
The process that gives rise to the stomatal complex. This process pertains to the initial formation of a structure from unspecified parts. The stomatal complex is the stomatal guard cells and their associated epidermal cells.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Guard mother cell differentiation GO:0010444
The process in which a meristemoid acquires the specialized features of a guard mother cell.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Regulation of DNA endoreduplication GO:0032875
Any process that modulates the frequency, rate or extent of DNA endoreduplication.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Conidium formation GO:0048315
The process of producing non-motile spores, called conidia, via mitotic asexual reproduction in higher fungi. Conidia are haploid cells genetically identical to their haploid parent. They are produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores, and participate in dispersal of the fungus.
|
3 | G5EAY5 (/IMP) G5EAY5 (/IMP) G5EAY5 (/IMP) |
Multicellular organismal water homeostasis GO:0050891
Any process involved in the maintenance of an internal steady state of water within a tissue, organ, or a multicellular organism.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Cleistothecium development GO:0070791
The process whose specific outcome is the progression of the cleistothecium over time, from its formation to the mature structure. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.
|
3 | G5EAY5 (/IMP) G5EAY5 (/IMP) G5EAY5 (/IMP) |
Positive regulation of conidium formation GO:0075307
Any process that activates, maintains or increases the frequency, rate or extent of conidium formation, a process of producing non-motile spores, called conidia, via mitotic asexual reproduction in higher fungi. Conidia are haploid cells genetically identical to their haploid parent. They are produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores, and participate in dispersal of the fungus.
|
3 | G5EAY5 (/IMP) G5EAY5 (/IMP) G5EAY5 (/IMP) |
Positive regulation of response to salt stress GO:1901002
Any process that activates or increases the frequency, rate or extent of response to salt stress.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Positive regulation of lateral root development GO:1901333
Any process that activates or increases the frequency, rate or extent of lateral root development.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Positive regulation of response to water deprivation GO:1902584
Any process that activates or increases the frequency, rate or extent of response to water deprivation.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Regulation of cell cycle G1/S phase transition GO:1902806
Any signalling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Regulation of stomatal complex patterning GO:2000037
Any process that modulates the frequency, rate or extent of stomatal complex patterning.
|
3 | F4IRB4 (/IMP) Q94FL6 (/IMP) Q94FL6 (/IMP) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
2 | Q9S754 (/TAS) Q9SPH0 (/TAS) |
Response to auxin GO:0009733
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
|
2 | Q94FL6 (/IEP) Q94FL6 (/IEP) |
Auxin polar transport GO:0009926
The unidirectional movement of auxin in the stem from tip to base along the vector of gravity or basipetally.
|
2 | Q94FL6 (/IMP) Q94FL6 (/IMP) |
Stomatal complex formation GO:0010376
The process that gives rise to the stomatal complex. This process pertains to the initial formation of a structure from unspecified parts. The stomatal complex is the stomatal guard cells and their associated epidermal cells.
|
2 | Q94FL6 (/IEP) Q94FL6 (/IEP) |
Positive regulation of histone H3-K27 methylation GO:0061087
Any process that increases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.
|
2 | Q94FL6 (/IMP) Q94FL6 (/IMP) |
Primary root development GO:0080022
The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle.
|
2 | Q94FL6 (/IMP) Q94FL6 (/IMP) |
Leaf pavement cell development GO:0090436
The process whose specific outcome is the progression of an leaf pavement cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a leaf pavement cell fate.
|
2 | Q94FL6 (/IMP) Q94FL6 (/IMP) |
Filamentous growth GO:0030447
The process in which a multicellular organism, a unicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.
|
1 | Q59T43 (/IMP) |
Lateral root development GO:0048527
The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.
|
1 | F4IRB4 (/IMP) |
Regulation of stomatal complex patterning GO:2000037
Any process that modulates the frequency, rate or extent of stomatal complex patterning.
|
1 | F4IRB4 (/IGI) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
6 | F4IRB4 (/IDA) G5EAY5 (/IDA) G5EAY5 (/IDA) G5EAY5 (/IDA) Q94FL6 (/IDA) Q94FL6 (/IDA) |