The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Homeodomain-like
".
FunFam 23: protein REVEILLE 6 isoform X1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 8 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
15 |
B3H5A8 (/ISS)
C0SVG5 (/ISS)
C0SVG5 (/ISS)
F4K5X6 (/ISS)
F4KGY6 (/ISS)
P92973 (/ISS)
P92973 (/ISS)
Q6R0G4 (/ISS)
Q6R0G4 (/ISS)
Q6R0H0 (/ISS)
(5 more) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
3 | F4KGY6 (/IDA) P92973 (/IDA) P92973 (/IDA) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
3 | F4K5X6 (/IPI) P92973 (/IPI) P92973 (/IPI) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
3 | P92973 (/IDA) P92973 (/IDA) Q8RWU3 (/IDA) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
2 | Q54HX6 (/ISS) Q54IF9 (/ISS) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
2 | Q6R0H1 (/IDA) Q6R0H1 (/IDA) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
2 | Q6R0H1 (/IDA) Q6R0H1 (/IDA) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
1 | F4KGY6 (/IMP) |
Showing 1 to 8 of 8 entries
There are 34 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Response to salt stress GO:0009651
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
|
14 |
B3H5A8 (/IEP)
C0SVG5 (/IEP)
C0SVG5 (/IEP)
F4K5X6 (/IEP)
P92973 (/IEP)
P92973 (/IEP)
Q6R0G4 (/IEP)
Q6R0G4 (/IEP)
Q6R0H0 (/IEP)
Q6R0H0 (/IEP)
(4 more) |
Response to ethylene GO:0009723
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.
|
12 |
B3H5A8 (/IEP)
C0SVG5 (/IEP)
C0SVG5 (/IEP)
F4K5X6 (/IEP)
P92973 (/IEP)
P92973 (/IEP)
Q6R0G4 (/IEP)
Q6R0G4 (/IEP)
Q6R0H1 (/IEP)
Q6R0H1 (/IEP)
(2 more) |
Response to abscisic acid GO:0009737
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
|
11 |
C0SVG5 (/IEP)
C0SVG5 (/IEP)
F4K5X6 (/IEP)
P92973 (/IEP)
P92973 (/IEP)
Q6R0G4 (/IEP)
Q6R0G4 (/IEP)
Q6R0H1 (/IEP)
Q6R0H1 (/IEP)
Q8H0W3 (/IEP)
(1 more) |
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
|
11 |
C0SVG5 (/IEP)
C0SVG5 (/IEP)
F4K5X6 (/IEP)
P92973 (/IEP)
P92973 (/IEP)
Q6R0G4 (/IEP)
Q6R0G4 (/IEP)
Q6R0H1 (/IEP)
Q6R0H1 (/IEP)
Q8H0W3 (/IEP)
(1 more) |
Response to salicylic acid GO:0009751
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
|
11 |
C0SVG5 (/IEP)
C0SVG5 (/IEP)
F4K5X6 (/IEP)
P92973 (/IEP)
P92973 (/IEP)
Q6R0G4 (/IEP)
Q6R0G4 (/IEP)
Q6R0H1 (/IEP)
Q6R0H1 (/IEP)
Q8H0W3 (/IEP)
(1 more) |
Response to jasmonic acid GO:0009753
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
|
11 |
C0SVG5 (/IEP)
C0SVG5 (/IEP)
F4K5X6 (/IEP)
P92973 (/IEP)
P92973 (/IEP)
Q6R0G4 (/IEP)
Q6R0G4 (/IEP)
Q6R0H1 (/IEP)
Q6R0H1 (/IEP)
Q8H0W3 (/IEP)
(1 more) |
Response to cadmium ion GO:0046686
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
|
11 |
B3H5A8 (/IEP)
C0SVG5 (/IEP)
C0SVG5 (/IEP)
P92973 (/IEP)
P92973 (/IEP)
Q6R0G4 (/IEP)
Q6R0G4 (/IEP)
Q6R0H1 (/IEP)
Q6R0H1 (/IEP)
Q8H0W3 (/IEP)
(1 more) |
Response to auxin GO:0009733
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
|
10 | C0SVG5 (/IEP) C0SVG5 (/IEP) F4K5X6 (/IEP) P92973 (/IEP) P92973 (/IEP) Q6R0G4 (/IEP) Q6R0G4 (/IEP) Q6R0H1 (/IEP) Q6R0H1 (/IEP) Q8RWU3 (/IEP) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
7 | B3H5A8 (/TAS) F4J2J6 (/TAS) F4K5X6 (/TAS) F4KGY6 (/TAS) Q6R0H1 (/TAS) Q6R0H1 (/TAS) Q8RWU3 (/TAS) |
Circadian rhythm GO:0007623
Any biological process in an organism that recurs with a regularity of approximately 24 hours.
|
5 | B3H5A8 (/IEP) F4K5X6 (/IEP) F4KGY6 (/IEP) P92973 (/IEP) P92973 (/IEP) |
Showing 1 to 10 of 34 entries
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
4 | P92973 (/IDA) P92973 (/IDA) Q6R0G4 (/IDA) Q6R0G4 (/IDA) |
Showing 1 to 1 of 1 entries