# STOCKHOLM 1.0 #=GF ID 3.10.430.100/FF/000008 #=GF DE 50S ribosomal protein L9 #=GF AC 3.10.430.100/FF/000008 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 78.390 #=GS A0A178UBR6/115-219 AC A0A178UBR6 #=GS A0A178UBR6/115-219 OS Arabidopsis thaliana #=GS A0A178UBR6/115-219 DE Uncharacterized protein #=GS A0A178UBR6/115-219 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9LVU5/115-219 AC Q9LVU5 #=GS Q9LVU5/115-219 OS Arabidopsis thaliana #=GS Q9LVU5/115-219 DE Ribosomal protein L9/RNase H1 #=GS Q9LVU5/115-219 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q65XC5/114-204 AC Q65XC5 #=GS Q65XC5/114-204 OS Oryza sativa Japonica Group #=GS Q65XC5/114-204 DE Os05g0528900 protein #=GS Q65XC5/114-204 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS E0CV64/112-215 AC E0CV64 #=GS E0CV64/112-215 OS Vitis vinifera #=GS E0CV64/112-215 DE Uncharacterized protein #=GS E0CV64/112-215 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS U5FUQ4/114-217 AC U5FUQ4 #=GS U5FUQ4/114-217 OS Populus trichocarpa #=GS U5FUQ4/114-217 DE Uncharacterized protein #=GS U5FUQ4/114-217 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A398AGF5/148-252 AC A0A398AGF5 #=GS A0A398AGF5/148-252 OS Brassica rapa #=GS A0A398AGF5/148-252 DE Uncharacterized protein #=GS A0A398AGF5/148-252 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; #=GS R0GBF7/116-219 AC R0GBF7 #=GS R0GBF7/116-219 OS Capsella rubella #=GS R0GBF7/116-219 DE Uncharacterized protein #=GS R0GBF7/116-219 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS D7MSD1/116-218 AC D7MSD1 #=GS D7MSD1/116-218 OS Arabidopsis lyrata subsp. lyrata #=GS D7MSD1/116-218 DE Ribosomal protein L9 family protein #=GS D7MSD1/116-218 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A078GPA6/148-252 AC A0A078GPA6 #=GS A0A078GPA6/148-252 OS Brassica napus #=GS A0A078GPA6/148-252 DE BnaA02g10490D protein #=GS A0A078GPA6/148-252 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A2T7D2W6/110-203 AC A0A2T7D2W6 #=GS A0A2T7D2W6/110-203 OS Panicum hallii var. hallii #=GS A0A2T7D2W6/110-203 DE Uncharacterized protein #=GS A0A2T7D2W6/110-203 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; Panicum hallii var. hallii; #=GS I1H224/107-199 AC I1H224 #=GS I1H224/107-199 OS Brachypodium distachyon #=GS I1H224/107-199 DE Uncharacterized protein #=GS I1H224/107-199 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS M4E1H7/148-252 AC M4E1H7 #=GS M4E1H7/148-252 OS Brassica rapa subsp. pekinensis #=GS M4E1H7/148-252 DE Uncharacterized protein #=GS M4E1H7/148-252 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A3L6F1M9/108-201 AC A0A3L6F1M9 #=GS A0A3L6F1M9/108-201 OS Zea mays #=GS A0A3L6F1M9/108-201 DE 50S ribosomal protein L9 #=GS A0A3L6F1M9/108-201 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS C5YJC3/108-201 AC C5YJC3 #=GS C5YJC3/108-201 OS Sorghum bicolor #=GS C5YJC3/108-201 DE Uncharacterized protein #=GS C5YJC3/108-201 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS K3YJQ2/110-203 AC K3YJQ2 #=GS K3YJQ2/110-203 OS Setaria italica #=GS K3YJQ2/110-203 DE Uncharacterized protein #=GS K3YJQ2/110-203 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Cenchrinae; Setaria; Setaria italica; #=GS A0A0D9WIW9/111-205 AC A0A0D9WIW9 #=GS A0A0D9WIW9/111-205 OS Leersia perrieri #=GS A0A0D9WIW9/111-205 DE Uncharacterized protein #=GS A0A0D9WIW9/111-205 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A0D3GA16/111-204 AC A0A0D3GA16 #=GS A0A0D3GA16/111-204 OS Oryza barthii #=GS A0A0D3GA16/111-204 DE Uncharacterized protein #=GS A0A0D3GA16/111-204 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0A1W8/111-204 AC A0A0E0A1W8 #=GS A0A0E0A1W8/111-204 OS Oryza glumipatula #=GS A0A0E0A1W8/111-204 DE Uncharacterized protein #=GS A0A0E0A1W8/111-204 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A3L6PP59/110-203 AC A0A3L6PP59 #=GS A0A3L6PP59/110-203 OS Panicum miliaceum #=GS A0A3L6PP59/110-203 DE 50S ribosomal protein L9 #=GS A0A3L6PP59/110-203 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS A0A0E0PQ91/114-204 AC A0A0E0PQ91 #=GS A0A0E0PQ91/114-204 OS Oryza rufipogon #=GS A0A0E0PQ91/114-204 DE Uncharacterized protein #=GS A0A0E0PQ91/114-204 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0DU39/111-204 AC A0A0E0DU39 #=GS A0A0E0DU39/111-204 OS Oryza meridionalis #=GS A0A0E0DU39/111-204 DE Uncharacterized protein #=GS A0A0E0DU39/111-204 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0E0L4W0/109-202 AC A0A0E0L4W0 #=GS A0A0E0L4W0/109-202 OS Oryza punctata #=GS A0A0E0L4W0/109-202 DE Uncharacterized protein #=GS A0A0E0L4W0/109-202 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0E0IE48/111-204 AC A0A0E0IE48 #=GS A0A0E0IE48/111-204 OS Oryza sativa f. spontanea #=GS A0A0E0IE48/111-204 DE Uncharacterized protein #=GS A0A0E0IE48/111-204 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS A0A2S3HZS2/110-203 AC A0A2S3HZS2 #=GS A0A2S3HZS2/110-203 OS Panicum hallii #=GS A0A2S3HZS2/110-203 DE Uncharacterized protein #=GS A0A2S3HZS2/110-203 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; #=GS B8B068/111-204 AC B8B068 #=GS B8B068/111-204 OS Oryza sativa Indica Group #=GS B8B068/111-204 DE Uncharacterized protein #=GS B8B068/111-204 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A3L6RHT6/110-203 AC A0A3L6RHT6 #=GS A0A3L6RHT6/110-203 OS Panicum miliaceum #=GS A0A3L6RHT6/110-203 DE 50S ribosomal protein L9 #=GS A0A3L6RHT6/110-203 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS C0PBI8/108-201 AC C0PBI8 #=GS C0PBI8/108-201 OS Zea mays #=GS C0PBI8/108-201 DE Ribosomal protein L9/RNase H1 #=GS C0PBI8/108-201 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A2K1YCJ3/113-217 AC A0A2K1YCJ3 #=GS A0A2K1YCJ3/113-217 OS Populus trichocarpa #=GS A0A2K1YCJ3/113-217 DE Uncharacterized protein #=GS A0A2K1YCJ3/113-217 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A2K1R799/204-307 AC A0A2K1R799 #=GS A0A2K1R799/204-307 OS Populus trichocarpa #=GS A0A2K1R799/204-307 DE Uncharacterized protein #=GS A0A2K1R799/204-307 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GF SQ 29 A0A178UBR6/115-219 VQTKEYEKAAKRLANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKIDPDNVVLAAPLETFGEYEVPLKFPKTIPLPQGTVQWILKVKVR- Q9LVU5/115-219 VQTKEYEKAAKRLANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKIDPDNVVLAAPLETFGEYEVPLKFPKTIPLPQGTVQWILKVKVR- Q65XC5/114-204 ---KEYQTAAKCLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIR- E0CV64/112-215 DKMKEYHTAAKRLETTRVAFRRFIKFEKGQPVR-KGEPLELRSPITKDDLVAEVARQLSVQVEPESLHLPSPLTHVGEFEVPLRLPKSIPLPEGKVRWTLKVKIR- U5FUQ4/114-217 -KMKEYETAAKRLVKAQLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFNVQIEPDNVHLPSPLTALGEFEVPLRFPKSIPMPEGKVKWTLKVKIR- A0A398AGF5/148-252 VQTKEFEKAAKRLANANLVLRKLIDKEKFKNRSSKEDKPDVQTPVTKEEIVSEVARQLCVKIDPDNVVLTEPLATFGEYEVPLKFPKTIPLPPGTVQWILKVKVR- R0GBF7/116-219 -QTKEYEKAAKRLANANLVLRKLIDKEKFKNRSSKDDKPDVQTPVTKEEIVAEVARQLCVKIDPDNVVLPAPLETFGEYEVPLKFPKTIPLPQGTVQWILKVKVR- D7MSD1/116-218 -QTKEYEKAAKRLANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKIDPDNVVLPAPLETFGEYEVPLKFPKTIPLPQGTVQWILKIKV-- A0A078GPA6/148-252 VQTKEFEKAAKRLANANLVLRKLIDKEKFKNRSSKEDKPDVQTPVTKEEIVSEVARQLCVKIDPDNVVLTEPLTTFGEYEVPLKFPKTIPLPPGTVQWILKVKVR- A0A2T7D2W6/110-203 ERLKQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINIHPDNLHLPSPLSSLGEFELPLRLPQDIPRPEGKLQWTLNVKIR- I1H224/107-199 EQLKEYQAAAKRLDNALLVLRRFISEGN-----------ELRNPVTKDEIVSEVARQLNINIHPDNVHLLSPLSSLGEFELPLRLPRDIPRPEGKLQWTLNVKI-- M4E1H7/148-252 VQTKEFEKAAKRLANANLVLRKLIDKEKFKNRSSKEDKPDVQTPVTKEEIVSEVARQLCVKIDPDNVVLTEPLATFGEYEVPLKFPKTIPLPPGTVQWILKVKVR- A0A3L6F1M9/108-201 ERMKQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINIHPENLHLHSPLASLGEFELPLRLPQNIPCPEGKLQWTLKVKIR- C5YJC3/108-201 ERLKQYQAAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNITIHPENLHLQSPLASLGEFELPLRLPQDIPRPEGKLQWTLKVKIR- K3YJQ2/110-203 ERLKQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINIHPDNLHLQSPLVSLGEFELPLRLPQDIPRPEGKLQWTLNVKIR- A0A0D9WIW9/111-205 EKLKEYQTAAKRLDNALLVLRRFISTGN-----------ELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLGEFEVPLRLPRDIPRPEGKIQCTLTVKIRR A0A0D3GA16/111-204 EKLKEYQTAAKRLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIR- A0A0E0A1W8/111-204 EKLKEYQTAAKRLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIR- A0A3L6PP59/110-203 ERLKQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINIHPDNLHLPSPLSSLGEFELPLRLPQDIPRPEGKLQWTLNVKIR- A0A0E0PQ91/114-204 ---KEYQTAAKCLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIR- A0A0E0DU39/111-204 DKLKEYQTAAKRLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIR- A0A0E0L4W0/109-202 EKLKEYQTAAKRLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIR- A0A0E0IE48/111-204 EKLKEYQTAAKRLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIR- A0A2S3HZS2/110-203 ERLKQYQTAAKRLDNALLVLRRFISTGT-----------ELRTPVTKDEIVSEVARQLNINIHPDNLHLSSPLSSLGEFELPLRLPQDIPRPEGKLQWTLNVKIR- B8B068/111-204 EKLKEYQTAAKRLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIR- A0A3L6RHT6/110-203 ERLKQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINIHPDNLHLPSALSSLGEFELPLRLPQDIPRPEGKLQWTLNVKIR- C0PBI8/108-201 ERMKQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINIHPENLHLHSPLASLGEFELPLRLPQNIPCPEGKLQWTLKVKIR- A0A2K1YCJ3/113-217 DKMKEYETAAKRLVKAQLAFRAGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFNVQIEPDNVHLPSPLTALGEFEVPLRFPKSIPLPEGKVKWTLKVKIR- A0A2K1R799/204-307 -KMKEYETAAKRLVKAQLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFNVQIEPDNVHLPSPLTALGEFEVPLRFPKSIPMPEGKVKWTLKVKIR- #=GC scorecons 2549786599989478487795585456111111212117656979977876997997575859886595589456997969976964994969667869589770 #=GC scorecons_70 ___***__*****_**_****__*_______________*___***************_*_*_****_*__**__***********__**_*_*_*****_****_ #=GC scorecons_80 ___***__*****__*_****__*_______________*___********_******___*_***__*__**___****_***_*__**_*_*__**_*_****_ #=GC scorecons_90 ___*_*__*****__*_*__*__*___________________*_**__*__**_**____*_***__*__**___**_*_**__*__**_*_*___*_*_**___ //