# STOCKHOLM 1.0
#=GF ID 1.10.132.60/FF/000013
#=GF DE DNA polymerase Pol2
#=GF AC 1.10.132.60/FF/000013
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 72.333
#=GS 1tgoA05/607-773       AC P56689
#=GS 1tgoA05/607-773       OS Thermococcus gorgonarius
#=GS 1tgoA05/607-773       DE DNA polymerase
#=GS 1tgoA05/607-773       DR CATH; 1tgo; A:607-773; 
#=GS 1tgoA05/607-773       DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus gorgonarius; 
#=GS P77933/1504-1670      AC P77933
#=GS P77933/1504-1670      OS Thermococcus kodakarensis KOD1
#=GS P77933/1504-1670      DE DNA polymerase
#=GS P77933/1504-1670      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis; 
#=GS P77933/1504-1670      DR EC; 2.7.7.7; 
#=GS Q58295/1474-1634      AC Q58295
#=GS Q58295/1474-1634      OS Methanocaldococcus jannaschii DSM 2661
#=GS Q58295/1474-1634      DE DNA polymerase
#=GS Q58295/1474-1634      DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus jannaschii; 
#=GS Q58295/1474-1634      DR EC; 2.7.7.7; 
#=GS A0D7P3/963-1161       AC A0D7P3
#=GS A0D7P3/963-1161       OS Paramecium tetraurelia
#=GS A0D7P3/963-1161       DE DNA polymerase
#=GS A0D7P3/963-1161       DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS Q9HH84/1533-1697      AC Q9HH84
#=GS Q9HH84/1533-1697      OS Thermococcus sp. GE8
#=GS Q9HH84/1533-1697      DE DNA polymerase
#=GS Q9HH84/1533-1697      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus sp. GE8; 
#=GS Q9HH84/1533-1697      DR EC; 2.7.7.7; 
#=GS Q9HH05/1502-1666      AC Q9HH05
#=GS Q9HH05/1502-1666      OS Thermococcus hydrothermalis
#=GS Q9HH05/1502-1666      DE DNA polymerase
#=GS Q9HH05/1502-1666      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus hydrothermalis; 
#=GS Q9HH05/1502-1666      DR EC; 2.7.7.7; 
#=GS P74918/1358-1522      AC P74918
#=GS P74918/1358-1522      OS Thermococcus fumicolans
#=GS P74918/1358-1522      DE DNA polymerase
#=GS P74918/1358-1522      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus fumicolans; 
#=GS P74918/1358-1522      DR EC; 2.7.7.7; 
#=GS A0A2Z2MLI3/996-1162   AC A0A2Z2MLI3
#=GS A0A2Z2MLI3/996-1162   OS Thermococcus siculi
#=GS A0A2Z2MLI3/996-1162   DE Uncharacterized protein
#=GS A0A2Z2MLI3/996-1162   DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus siculi; 
#=GS A0A2Z2MPY8/998-1162   AC A0A2Z2MPY8
#=GS A0A2Z2MPY8/998-1162   OS Thermococcus barossii
#=GS A0A2Z2MPY8/998-1162   DE Uncharacterized protein
#=GS A0A2Z2MPY8/998-1162   DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus barossii; 
#=GS B6YSF2/1142-1308      AC B6YSF2
#=GS B6YSF2/1142-1308      OS Thermococcus onnurineus NA1
#=GS B6YSF2/1142-1308      DE DNA polymerase
#=GS B6YSF2/1142-1308      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus onnurineus; 
#=GS A0A097QTD6/1144-1310  AC A0A097QTD6
#=GS A0A097QTD6/1144-1310  OS Thermococcus eurythermalis
#=GS A0A097QTD6/1144-1310  DE DNA polymerase
#=GS A0A097QTD6/1144-1310  DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus eurythermalis; 
#=GS W8P4K3/1358-1522      AC W8P4K3
#=GS W8P4K3/1358-1522      OS Thermococcus nautili
#=GS W8P4K3/1358-1522      DE DNA polymerase elongation subunit (Family B)
#=GS W8P4K3/1358-1522      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus nautili; 
#=GS I3ZT69/1304-1468      AC I3ZT69
#=GS I3ZT69/1304-1468      OS Thermococcus cleftensis
#=GS I3ZT69/1304-1468      DE DNA polymerase, family B
#=GS I3ZT69/1304-1468      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus cleftensis; 
#=GS A0SXL5/1146-1310      AC A0SXL5
#=GS A0SXL5/1146-1310      OS Thermococcus thioreducens
#=GS A0SXL5/1146-1310      DE DNA polymerase
#=GS A0SXL5/1146-1310      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus thioreducens; 
#=GS B7R1D4/1535-1699      AC B7R1D4
#=GS B7R1D4/1535-1699      OS Thermococcus sp. AM4
#=GS B7R1D4/1535-1699      DE DNA polymerase family B
#=GS B7R1D4/1535-1699      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus sp. AM4; 
#=GS A0A076LBT2/783-943    AC A0A076LBT2
#=GS A0A076LBT2/783-943    OS Methanocaldococcus bathoardescens
#=GS A0A076LBT2/783-943    DE DNA polymerase II, family B
#=GS A0A076LBT2/783-943    DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus bathoardescens; 
#=GS D3S536/1977-2137      AC D3S536
#=GS D3S536/1977-2137      OS Methanocaldococcus sp. FS406-22
#=GS D3S536/1977-2137      DE DNA polymerase Pol2
#=GS D3S536/1977-2137      DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus sp. FS406-22; 
#=GS C7P594/1488-1647      AC C7P594
#=GS C7P594/1488-1647      OS Methanocaldococcus fervens AG86
#=GS C7P594/1488-1647      DE DNA-directed DNA polymerase
#=GS C7P594/1488-1647      DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus fervens; 
#=GS Q2Q453/1142-1308      AC Q2Q453
#=GS Q2Q453/1142-1308      OS Thermococcus onnurineus
#=GS Q2Q453/1142-1308      DE DNA polymerase
#=GS Q2Q453/1142-1308      DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus onnurineus; 
#=GF SQ 19
1tgoA05/607-773               GLEIVRRDWSEIAKETQARVLEAILK-------HGDVEEAVRIVKEVTEKLS-----------------KYEVPPEKLVIYEQITRDLKDYKAT--GPHVAVAKRLA---ARGIKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPAKHKYDAEYYIENQVLPAVERILRAFGY-RKEDLRYQKTRQVGLGAW-----LKPKT
P77933/1504-1670              GLEIVRRDWSEIAKETQARVLEALLK-------DGDVEKAVRIVKEVTEKLS-----------------KYEVPPEKLVIHEQITRDLKDYKAT--GPHVAVAKRLA---ARGVKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPTKHKYDAEYYIENQVLPAVERILRAFGY-RKEDLRYQKTRQVGLSAW-----LKPKG
Q58295/1474-1634              GLEFVRRDWSNIAKITQRRVLEALLV-------EGSIEKAKKIIQDVIKDLR-----------------EKKIKKEDLIIYTQLTKDPKEYKTT--APHVEIAKKLM---REGKRIKVGDIIGYIIVKGTKS--ISERAKLPEEVD--IDDIDVNYYIDNQILPPVLRIMEAVGV-SKNELK-KEGAQLTLDKF-----FK---
A0D7P3/963-1161               -IDIVRREFCDISKKMQSHVLDILLKTKNRDDIHGDLITLMQEIRSMFDALSGNSNADPKQLIAQNRFITYEIPTSDFIIVKQLNKAPHEYSDTISAPHVQVALRMVNEYGRSAQSLVNHFIRYVICEDPTQKNLSFRAYTVDELINKNLTIDYYYYLSTQIFDPIVRLCKNVQVISISELA----QILGLKTYQYKDKVNHEF
Q9HH84/1533-1697              --EIVRRDWSEIAKETQARVLEAILK-------HGDVEEAVRIVKEVTEKLS-----------------KYEVPPEKLVIHEQITRDLKDYKAT--GPHVAVAKRLA---ARGIKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPAKHKYDAEYYIENQVLPAVERILRAFGY-RKEDLRYQKTKQVGLGAW-----LKVKG
Q9HH05/1502-1666              --EIVRRDWSEIAKETQARVLEAILR-------HGDVEEAVRIVKDVTEKLS-----------------KYEVPPEKLVIHEQITRELKDYKAT--GPHVAIAKRLA---ARGIKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPTKHRYDAEYYIENQVLPAVERILKAFGY-KKEELRYQKTRQVGLGAW-----LKLKG
P74918/1358-1522              --EIVRRDWSEVAKETQARVLEAILR-------HGDVEEAVRIVKEVTEKLS-----------------KYEVPPEKLVIHEQITRELKDYKAT--GPHVAIAKRLA---ARGIKVRPGTVISYIVLKGSGR--IGDRTIPFDEFDPTKHRYDAEYYIENQVLPAVERILKAFGY-KKEDLRYQKTRQVGLGAW-----LKMGK
A0A2Z2MLI3/996-1162           GLEIVRRDWSEIAKETQARVLEALLK-------DGDVEEAVSIVKEVTEKLS-----------------KYEVPPEKLVIHEQITRELKDYKAT--GPHVAIAKRLA---ARGVKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPTKHKYDAEYYIENQVLPAVERILKAFGY-RGEELRYQKTRQVGLGAW-----LKPKG
A0A2Z2MPY8/998-1162           --EIVRRDWSEIAKETQARVLEAILR-------HGDVEEAVRIVKEVTEKLS-----------------KYEVPPEKLVIHEQITRELKDYKAT--GPHVAIAKRLA---ARGVKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPTKHRYDADYYIENQVLPAVERILRAFGY-KKEDLRYQKTRQVGLGAW-----LKPKG
B6YSF2/1142-1308              GLEIVRRDWSDIAKETQARVLEALLK-------DGNVEKAVKIVKEITEKLS-----------------KYEIPPEKLVIHEQITRELKDYKAT--GPHVAIAKRLA---ARGIKVRPGTIISYIVLKGSGR--IGDRAIPFDEFDPTKHKYDADYYIENQVLPAVMRILEAFGY-KKEDLRYQKTRQVGLGAW-----LKPKK
A0A097QTD6/1144-1310          GLEIVRRDWSEIAKETQARVLEAILK-------HGDVEKAVRIVKEVTEKLS-----------------KYEVPPEKLVIHEQITRDLKDYKAT--GPHVAVAKRLA---ARGVKIRPGTVISYIVLKGSGR--IGDRAIPADEFDPTKHKYDAEYYIENQVLPAVERILRAFGY-RKEDLRYQKTKQVGLSAW-----LKPKG
W8P4K3/1358-1522              --EIVRRDWSEIAKETQARVLEAILK-------HGDVEEAVRIVKEVTEKLS-----------------KYEVPPEKLVIHEQITRDLRDYKAT--GPHVAVAKRLA---ARGVKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPTKHRYDAEYYIENQVLPAVERILKAFGY-RKEDLRYQKTKQVGLGAW-----LKVKK
I3ZT69/1304-1468              --EIVRRDWSEIAKETQARVLEAILK-------HGDVEEAVRIVREVTEKLS-----------------KYEVPPEKLVIHEQITRELKDYKAT--GPHVAIAKRLA---ARGVKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPTKHKYDADYYIENQVLPAVERILRAFGY-RKEDLRYQKTRQVGLGAW-----LKPKG
A0SXL5/1146-1310              --EIVRRDWSEIAKETQARVLEAILR-------HGDVEEAVRIVKEVTEKLS-----------------KYEVPPEKLVIHEQITRELKDYRAT--GPHVAIAKRLA---KRGIKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPTKHKYDAEYYIENQVLPAVERVLKAFGY-RKDDLRYQKTRQVGLGAW-----LKVKK
B7R1D4/1535-1699              --EIVRRDWSEIAKETQARVLEAILK-------HGDVEEAVRIVKEVTEKLS-----------------KYEVPPEKLVIHEQITRDLRDYKAT--GPHVAVAKRLA---ARGVKIRPGTVISYIVLKGSGR--IGDRAIPFDEFDPTKHRYDAEYYIENQVLPAVERILKAFGY-RKEDLRYQKTKQVGLGAW-----LKVKK
A0A076LBT2/783-943            GLEFVRRDWSNIAKITQRKVLETLLV-------EGSIEKAKKIIQDVIKDLR-----------------EKKIKKEDLIIYTQLTKDPKEYKTT--APHVEIAKKLM---REGKRIKVGDIIGYIIVKGTKS--ISERAKLPEEVD--IEDVDVNYYIDNQILPPVLRIMEAVGV-SKNELK-KEGAQLTLDRF-----LF---
D3S536/1977-2137              GLEFVRRDWSNIAKITQRKVLEALLV-------EGSIEKAKKIIQDVIKDLR-----------------EKKIKKEDLIIYTQLTKDPKEYKTT--APHVEIAKKLM---REGKRIKVGDIIGYIIVKGTKS--ISERAKLPEEVD--IEDVDVNYYIDNQILPPVLRIMEAVGV-SKNELK-KEGAQLTLDKF-----FN---
C7P594/1488-1647              -LEFVRRDWSNIAKITQRKVLEALLV-------EGNIEKAKKIIQDIIRDLR-----------------ERKIKKEDLIIYTQLTKDPKEYKTT--APHVEIAKRLM---REGKRVKVGDIIGYIIVKGAKS--ISERAKLPEEVD--IEDVDVNYYIDNQILPPVLRIMEAVGV-SKNELK-KEGAQLTLDKF-----FK---
Q2Q453/1142-1308              GLEIVRRDWSDIAKETQARVLEALLK-------DGNVEKAVKIVKEITEKLS-----------------KYEIPPEKLVIHEQITRELKDYKAT--GPHVAIAKRLA---ARGIKVRPGTIISYIVLKGSGR--IGDRAIPFDEFDPTKHKYDADYYIENQVLPAVMRILEAFGY-KKEDLRYQKTRQVGLGAW-----LKPKK
#=GC scorecons                138699987758794794699866940000000595665745676565549500000000000000000556754757795496775577965900699947967750004673665574595987577545007659845479562244449449975797776839755757404657952444466694450000065121
#=GC scorecons_70             __*_******_***_**_*******_________*_**_*__**__*___*____________________**__*_***__****__****_*___***_*****______*_*___*__*_***_**_____*__**___**_*______*__***_*****_*_**__*_*___*_**______**_*_____________
#=GC scorecons_80             __*_******_***_**__***__*_________*____*__________*________________________*_*_*__*_*_____*__*___***_**_**______*_____*__*_**__**_____*__**___**________*__***_**_*__*_**__*_*______*_________*_____________
#=GC scorecons_90             ____***____*_*__*__**___*_________*_______________*____________________________*__*_______*__*___***__*__________________*_*_____________**____*________*__**___*______*____________*_________*_____________
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