# STOCKHOLM 1.0
#=GF ID 3.90.1860.10/FF/000004
#=GF DE tRNA-splicing ligase RtcB
#=GF AC 3.90.1860.10/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 4.666
#=GS Q8I5J3/323-568      AC Q8I5J3
#=GS Q8I5J3/323-568      OS Plasmodium falciparum 3D7
#=GS Q8I5J3/323-568      DE tRNA-splicing ligase RtcB, putative
#=GS Q8I5J3/323-568      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8I5J3/323-568      DR GO; GO:0020011; 
#=GS A0A151LGE0/319-563  AC A0A151LGE0
#=GS A0A151LGE0/319-563  OS Plasmodium gaboni
#=GS A0A151LGE0/319-563  DE Uncharacterized protein
#=GS A0A151LGE0/319-563  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium gaboni; 
#=GS A0A151L8W0/326-568  AC A0A151L8W0
#=GS A0A151L8W0/326-568  OS Plasmodium reichenowi
#=GS A0A151L8W0/326-568  DE Uncharacterized protein
#=GS A0A151L8W0/326-568  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A0L7KAE5/323-568  AC A0A0L7KAE5
#=GS A0A0L7KAE5/323-568  OS Plasmodium falciparum HB3
#=GS A0A0L7KAE5/323-568  DE Uncharacterized protein
#=GS A0A0L7KAE5/323-568  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7F4P1/323-568      AC W7F4P1
#=GS W7F4P1/323-568      OS Plasmodium falciparum 7G8
#=GS W7F4P1/323-568      DE Uncharacterized protein
#=GS W7F4P1/323-568      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IES6/323-568      AC W4IES6
#=GS W4IES6/323-568      OS Plasmodium falciparum NF135/5.C10
#=GS W4IES6/323-568      DE Uncharacterized protein
#=GS W4IES6/323-568      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JV24/323-568      AC W7JV24
#=GS W7JV24/323-568      OS Plasmodium falciparum UGT5.1
#=GS W7JV24/323-568      DE Uncharacterized protein
#=GS W7JV24/323-568      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BZ68/323-568  AC A0A2I0BZ68
#=GS A0A2I0BZ68/323-568  OS Plasmodium falciparum NF54
#=GS A0A2I0BZ68/323-568  DE tRNA-splicing ligase RtcB
#=GS A0A2I0BZ68/323-568  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WLZ7/323-568  AC A0A024WLZ7
#=GS A0A024WLZ7/323-568  OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WLZ7/323-568  DE Uncharacterized protein
#=GS A0A024WLZ7/323-568  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1I8N6/301-547  AC A0A0L1I8N6
#=GS A0A0L1I8N6/301-547  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1I8N6/301-547  DE Uncharacterized protein
#=GS A0A0L1I8N6/301-547  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024V443/301-547  AC A0A024V443
#=GS A0A024V443/301-547  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024V443/301-547  DE Uncharacterized protein
#=GS A0A024V443/301-547  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024X569/301-547  AC A0A024X569
#=GS A0A024X569/301-547  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024X569/301-547  DE Uncharacterized protein
#=GS A0A024X569/301-547  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VI45/301-547  AC A0A024VI45
#=GS A0A024VI45/301-547  OS Plasmodium falciparum FCH/4
#=GS A0A024VI45/301-547  DE Uncharacterized protein
#=GS A0A024VI45/301-547  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7KDC8/301-547      AC W7KDC8
#=GS W7KDC8/301-547      OS Plasmodium falciparum NF54
#=GS W7KDC8/301-547      DE Uncharacterized protein
#=GS W7KDC8/301-547      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FV84/301-547      AC W7FV84
#=GS W7FV84/301-547      OS Plasmodium falciparum Santa Lucia
#=GS W7FV84/301-547      DE Uncharacterized protein
#=GS W7FV84/301-547      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4J0V1/301-547      AC W4J0V1
#=GS W4J0V1/301-547      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4J0V1/301-547      DE Uncharacterized protein
#=GS W4J0V1/301-547      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024W5K5/301-547  AC A0A024W5K5
#=GS A0A024W5K5/301-547  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024W5K5/301-547  DE Uncharacterized protein
#=GS A0A024W5K5/301-547  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A060RW17/326-568  AC A0A060RW17
#=GS A0A060RW17/326-568  OS Plasmodium reichenowi
#=GS A0A060RW17/326-568  DE Uncharacterized protein
#=GS A0A060RW17/326-568  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GF SQ 18
Q8I5J3/323-568              -YSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A151LGE0/319-563          --SNVHNDISLNNKNYDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEQVVYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A151L8W0/326-568          ----VYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVVYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A0L7KAE5/323-568          -YSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
W7F4P1/323-568              -YSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
W4IES6/323-568              -YSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
W7JV24/323-568              -YSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A2I0BZ68/323-568          -YSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A024WLZ7/323-568          -YSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A0L1I8N6/301-547          NYSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A024V443/301-547          NYSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A024X569/301-547          NYSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A024VI45/301-547          NYSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
W7KDC8/301-547              NYSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
W7FV84/301-547              NYSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
W4J0V1/301-547              NYSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A024W5K5/301-547          NYSNVYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVMYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNVLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
A0A060RW17/326-568          ----VYKDISLNNKNDDLSDVYILIHSGSRNIGKSVAEFYDILASEESKMKRNDLAYLDLKKDNGKNYLKDMKVCLEYAKYNRIYMMKIIEKIIYEETKCTLNWDQSINIHHNFCNYEKVVYLDNNEIKKEYMYVTRKGATSSKKNQYGIIPGNMKTGSYIVKGKGNLLSYNSCSHGCGRVLSRTKAKQFIKQQEFIDIMKGVKCDTNNKIRDEAPQAYKNLNQVLKNQESLIYLIKKLNPIINIKG
#=GC scorecons              0344987999999997999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999796999999999999999999999999999999999999999999999979999999999999999999999999999999999999999999999999999999999999999999999999999999
#=GC scorecons_70           ____***************************************************************************************************************************************************************************************************************************************************
#=GC scorecons_80           ____***********_********************************************************************************************************_******************************************************************************************************************************
#=GC scorecons_90           ____*__********_******************************************************************************************************_*_**********************************************_*******************************************************************************
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