# STOCKHOLM 1.0 #=GF ID 3.40.960.10/FF/000002 #=GF DE DNA helicase related protein #=GF AC 3.40.960.10/FF/000002 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 94.093 #=GS Q8RDR3/754-849 AC Q8RDR3 #=GS Q8RDR3/754-849 OS Fusobacterium nucleatum subsp. nucleatum ATCC 25586 #=GS Q8RDR3/754-849 DE DNA helicase #=GS Q8RDR3/754-849 DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. nucleatum; #=GS Q8REY5/1291-1391 AC Q8REY5 #=GS Q8REY5/1291-1391 OS Fusobacterium nucleatum subsp. nucleatum ATCC 25586 #=GS Q8REY5/1291-1391 DE DNA helicase #=GS Q8REY5/1291-1391 DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. nucleatum; #=GS Q8P8Y4/1862-1965 AC Q8P8Y4 #=GS Q8P8Y4/1862-1965 OS Xanthomonas campestris pv. campestris str. ATCC 33913 #=GS Q8P8Y4/1862-1965 DE DNA helicase related protein #=GS Q8P8Y4/1862-1965 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS Q8TKB8/1271-1379 AC Q8TKB8 #=GS Q8TKB8/1271-1379 OS Methanosarcina acetivorans C2A #=GS Q8TKB8/1271-1379 DE Uncharacterized protein #=GS Q8TKB8/1271-1379 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina acetivorans; #=GS Q89BQ9/1623-1728 AC Q89BQ9 #=GS Q89BQ9/1623-1728 OS Bradyrhizobium diazoefficiens USDA 110 #=GS Q89BQ9/1623-1728 DE Bll8089 protein #=GS Q89BQ9/1623-1728 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; #=GS A0A2A2AIR0/1852-1956 AC A0A2A2AIR0 #=GS A0A2A2AIR0/1852-1956 OS Comamonadaceae bacterium NML00-0135 #=GS A0A2A2AIR0/1852-1956 DE DNA helicase #=GS A0A2A2AIR0/1852-1956 DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonadaceae bacterium NML00-0135; #=GS A0A1C3JZL7/1850-1952 AC A0A1C3JZL7 #=GS A0A1C3JZL7/1850-1952 OS Orrella dioscoreae #=GS A0A1C3JZL7/1850-1952 DE DNA helicase related protein #=GS A0A1C3JZL7/1850-1952 DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Orrella; Orrella dioscoreae; #=GS A0A077KXT0/1851-1954 AC A0A077KXT0 #=GS A0A077KXT0/1851-1954 OS Acidovorax avenae subsp. avenae #=GS A0A077KXT0/1851-1954 DE DNA helicase related protein #=GS A0A077KXT0/1851-1954 DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax; Acidovorax avenae; Acidovorax avenae subsp. avenae; #=GS A0A208YBT2/1851-1955 AC A0A208YBT2 #=GS A0A208YBT2/1851-1955 OS Pigmentiphaga sp. NML030171 #=GS A0A208YBT2/1851-1955 DE DNA helicase #=GS A0A208YBT2/1851-1955 DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pigmentiphaga; Pigmentiphaga sp. NML030171; #=GS W4S0I8/1236-1341 AC W4S0I8 #=GS W4S0I8/1236-1341 OS Xanthomonas arboricola pv. pruni str. MAFF 311562 #=GS W4S0I8/1236-1341 DE DNA helicase-like protein #=GS W4S0I8/1236-1341 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas arboricola; #=GS A0A0E3KX80/1264-1372 AC A0A0E3KX80 #=GS A0A0E3KX80/1264-1372 OS Methanosarcina sp. WH1 #=GS A0A0E3KX80/1264-1372 DE DNA helicase related protein #=GS A0A0E3KX80/1264-1372 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina sp. WH1; #=GS A0A0E3P6P1/1264-1372 AC A0A0E3P6P1 #=GS A0A0E3P6P1/1264-1372 OS Methanosarcina siciliae T4/M #=GS A0A0E3P6P1/1264-1372 DE DNA helicase related protein #=GS A0A0E3P6P1/1264-1372 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina siciliae; #=GS A0A0F8E5K5/1267-1375 AC A0A0F8E5K5 #=GS A0A0F8E5K5/1267-1375 OS Methanosarcina sp. 2.H.A.1B.4 #=GS A0A0F8E5K5/1267-1375 DE Uncharacterized protein #=GS A0A0F8E5K5/1267-1375 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina sp. 2.H.A.1B.4; #=GS A0A0E3WT56/1265-1373 AC A0A0E3WT56 #=GS A0A0E3WT56/1265-1373 OS Methanosarcina lacustris Z-7289 #=GS A0A0E3WT56/1265-1373 DE DNA helicase related protein #=GS A0A0E3WT56/1265-1373 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina lacustris; #=GS A0A0F8N4Q7/1264-1372 AC A0A0F8N4Q7 #=GS A0A0F8N4Q7/1264-1372 OS Methanosarcina sp. 1.H.A.2.2 #=GS A0A0F8N4Q7/1264-1372 DE Uncharacterized protein #=GS A0A0F8N4Q7/1264-1372 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina sp. 1.H.A.2.2; #=GS A0A0E3SHG9/1261-1369 AC A0A0E3SHG9 #=GS A0A0E3SHG9/1261-1369 OS Methanosarcina horonobensis HB-1 = JCM 15518 #=GS A0A0E3SHG9/1261-1369 DE DNA helicase related protein #=GS A0A0E3SHG9/1261-1369 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina horonobensis; #=GS A0A1X3HDK9/1625-1729 AC A0A1X3HDK9 #=GS A0A1X3HDK9/1625-1729 OS Bradyrhizobium canariense #=GS A0A1X3HDK9/1625-1729 DE Uncharacterized protein #=GS A0A1X3HDK9/1625-1729 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium canariense; #=GF SQ 17 Q8RDR3/754-849 ----------NMLIKNPELLNDQEYQYMMNPATHVDFLIYNRISK-KPVLAIEVDGYKYHKKESKQASRDLLKNRILE-----LYEIPLLRFKTNGSGEKEKIIELLEKLR--M Q8REY5/1291-1391 VISDFENEITKHLLERNYTVKQQ----WKVGSYDIDIVAIYGDKK----IAIECDGKNLNHSQEKI-IANLAEQEVLERCGWEFVRVRASQYFRNPDKAIKELILQLEDK---- Q8P8Y4/1862-1965 FDSPFEQAVAAALARRGWHVQPQ----IGASSFRIDLGIVDPDAPGRYLAGVECDGATYHRSATAR-DRDKLREQVLRGLGWDIVRVWSTDWWIDPAGTLDRLDARLQA----- Q8TKB8/1271-1379 LDSPFEEAVAEFLTENGCEVHSQ----IGCAGYRLDLAVPDPRHPGRYVLGIECDGASYHSSPVAR-DRDRLRQQILEGLGWKIYRVWSTDWYLHPKECREKLLETVKAAVEQA Q89BQ9/1623-1728 PDSDFERWFLSRLKAANYQAHPQ----VGVAKYRIDIGVVHPDKPGSYILGVECDGATYHSSKSAR-DRDRLRQDVLEGLNWRIYRIWSTDWYRDPEREFNRLIERIERLR--- A0A2A2AIR0/1852-1956 FDSPFEQAVATALAQRGWQVQPQ----IGASSFRIDLGIVDPDAPGRYLAGVECDGATYHRSATAR-DRDKLREQVLRGLGWEILRVWSTDWWIDPAGTLDRLDARLQAV---- A0A1C3JZL7/1850-1952 FESPFEQAVATALARRGWQVQPQ----IGASSFRVDLGIVDPDAAGRYLAGVECDGATYHRSATAR-DRDKLREQVLRGLGWDIVRVWSTDWWIDPAGTLDRLDARLR------ A0A077KXT0/1851-1954 FDSPFEQAVATALAQRGWQVQPQ----IGASSFRVDLGIVDPDAPGRYLAGVECDGATYHRSATAR-DRDKLREQVLRGLGWDIVRVWSTDWWIDPTGTLDRLDVRLQA----- A0A208YBT2/1851-1955 FDSPFEQAVATALAQRGWRVQPQ----IGASSFRIDLGIVDPDAPGRYLAGVECDGATYHRSATAR-DRDKLREQVLRGLGWEIVRVWSTDWWIDPTGTLDRLDARLQAV---- W4S0I8/1236-1341 FESPFEKAVATALAQRGWQVQPQ----IGASSFRVDLGIVDPDAPRRYLAGVECDGATYHRSATAR-DRDKLREQVLRGLGWDIVRVWSTDWWIDPAGTLDRIDARLQALL--- A0A0E3KX80/1264-1372 LDSPFEEAVADFLTENGCEVHRQ----IGCAGYRLDLAIPDPRHAGRYVLGIECDGASYHSSPVAR-DRDRLRQQVLEGLGWKIYRVWSTDWYLHPKDCREKLLETVKAAVKQA A0A0E3P6P1/1264-1372 LDSPFEEAISEFLTENGCEVHSQ----IGCAGYRLDLAVPDPRHPGRYVLGIECDGASYHSSPVAR-DRDRLRQQILEGLGWKIYRVWSTDWYLHPKECREKLLETVKTAVKQA A0A0F8E5K5/1267-1375 LDSPFEEAVSDFLTENGCEVHRQ----IGCAGYRLDLAVPDPRHPGRYVLGIECDGASYHSSPVAR-DRDRLRQQVLGGLGWKIYRVWSTDWYLHPKECREKLLDTVKAAVKQA A0A0E3WT56/1265-1373 LDSPFEEAVSDFLTENGCEVHRQ----IGCAGYRLDLAVPDPRHPGRYVLGIECDGASYHSSPVAR-DRDRLRQQVLEGLGWKIYRVWSTDWYLHPKDCRDKLLDAVKAAVKQA A0A0F8N4Q7/1264-1372 LDSPFEEAVSDFLTENGCEVHRQ----IGCAGYRLDLAVPDPRHPGRYVLGIECDGASYHSSPVAR-DRDRLRQQVLEGLGWKIYRVWSTDWYLHPKDCREKLLDTVKAAVRQA A0A0E3SHG9/1261-1369 LESPFEEAVSEFLTENGCEVHRQ----IGCAGYRLDLAVPDPRHPGRYVLGIECDGADYHSSPVAR-DRDRLRQQVLEGLGWKIYRVWSTDWYLHPKECREKLLETVKEAVKQA A0A1X3HDK9/1625-1729 -GSDFERWFLSRLKSASYEAHPQ----VGVAGYRIDIGVVHPDKPGSYILGVECDGATYHSSKSAR-DRDRLRQDVLEGLNWRIYRVWSTDWYRDPEREFDRLIQQIERLR--- #=GC scorecons 346466344333944554465490000563556659646456445455456797996477474466067847755795555636477566664357343356743365421001 #=GC scorecons_70 __*_**______*______*__*__________*_*__*__*________******__**_*__**__**_**__**____*_*_**_****___*_____**___________ #=GC scorecons_80 ____________*_________*____________*________________****__**_*______**_*___**________**________*______*___________ #=GC scorecons_90 ____________*_________*____________*________________*_**____________________*_____________________________________ //